Homology VHH388 vs DNA
Query= VHH388 (VHH388Q) /CSM/VH/VHH3-D/VHH388Q.Seq.d/
(1227 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ422452) Dictyostelium discoideum cDNA clone:ddv45p21, 5' ... 1277 0.0 1
(U20608) Dictyostelium discoideum unknown spore germination-... 765 0.0 7
(BJ424285) Dictyostelium discoideum cDNA clone:ddv51p19, 5' ... 603 0.0 3
(BJ424424) Dictyostelium discoideum cDNA clone:ddv52l07, 5' ... 587 0.0 3
(BJ420159) Dictyostelium discoideum cDNA clone:ddv38m09, 5' ... 587 0.0 3
(BJ441195) Dictyostelium discoideum cDNA clone:ddv45p21, 3' ... 507 0.0 2
(BJ392752) Dictyostelium discoideum cDNA clone:dds28f21, 5' ... 670 0.0 1
(BJ432860) Dictyostelium discoideum cDNA clone:ddv20g06, 3' ... 500 0.0 2
(BJ439228) Dictyostelium discoideum cDNA clone:ddv39f20, 3' ... 500 0.0 2
(BJ404525) Dictyostelium discoideum cDNA clone:dds28f21, 3' ... 500 0.0 2
(BJ442228) Dictyostelium discoideum cDNA clone:ddv49p06, 3' ... 500 0.0 2
(BJ437084) Dictyostelium discoideum cDNA clone:ddv33k06, 3' ... 500 0.0 2
(BJ438566) Dictyostelium discoideum cDNA clone:ddv37f11, 3' ... 500 0.0 2
(BJ445644) Dictyostelium discoideum cDNA clone:ddv60m03, 3' ... 500 0.0 2
(BJ438769) Dictyostelium discoideum cDNA clone:ddv38m09, 3' ... 500 0.0 2
(BJ445244) Dictyostelium discoideum cDNA clone:ddv58k24, 3' ... 500 0.0 2
(BJ446596) Dictyostelium discoideum cDNA clone:ddv63a07, 3' ... 490 0.0 2
(BJ443262) Dictyostelium discoideum cDNA clone:ddv52l07, 3' ... 486 0.0 2
(AU284314) Dictyostelium discoideum gamete cDNA clone:FC-AK1... 476 e-171 3
(AU272148) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 373 e-164 3
(AU272147) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 373 e-164 3
(AU270579) Dictyostelium discoideum vegetative cDNA clone:VS... 500 e-137 1
(AU268052) Dictyostelium discoideum vegetative cDNA clone:VS... 482 e-131 1
(AU268051) Dictyostelium discoideum vegetative cDNA clone:VS... 482 e-131 1
(BJ443118) Dictyostelium discoideum cDNA clone:ddv51p19, 3' ... 482 e-131 1
(BJ431854) Dictyostelium discoideum cDNA clone:ddv15f21, 3' ... 432 e-130 2
(AU265560) Dictyostelium discoideum vegetative cDNA clone:VS... 472 e-128 1
(AU265559) Dictyostelium discoideum vegetative cDNA clone:VS... 472 e-128 1
(BJ420599) Dictyostelium discoideum cDNA clone:ddv39f20, 5' ... 228 e-103 3
(BJ426764) Dictyostelium discoideum cDNA clone:ddv60m03, 5' ... 200 9e-47 1
(AU284224) Dictyostelium discoideum gamete cDNA clone:FC-AA1... 72 1e-35 3
(AC112040) Rattus norvegicus clone CH230-61E10, *** SEQUENCI... 40 0.031 2
(AC125885) Rattus norvegicus clone CH230-9L7, *** SEQUENCING... 40 0.032 2
(BZ180278) CH230-485G15.TV CHORI-230 Segment 2 Rattus norveg... 40 0.041 2
(AC103512) Rattus norvegicus clone CH230-102H5, *** SEQUENCI... 52 0.051 1
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 48 0.062 11
(AC006765) Caenorhabditis elegans clone Y43H11, *** SEQUENCI... 38 0.12 2
(AF077539) Caenorhabditis elegans cosmid T25D3, complete seq... 38 0.13 2
(ET724041) CHO_OF133xo08f1.ab1 CHO_OF Nicotiana tabacum geno... 40 0.15 2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 32 0.16 18
(BG603357) EST502447 Plasmodium yoelii sporozoite cDNA Plasm... 50 0.20 1
(AL031745) Plasmodium falciparum DNA from MAL1P2. 34 0.74 12
(AC184781) Zea mays chromosome 5 clone CH201-205B2; ZMMBBc02... 48 0.79 1
(CK813165) Rasgsc2470 Salivary Gland 4th instar 3rd period (... 48 0.79 1
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 38 0.94 20
(AC069494) Homo sapiens chromosome 18, clone RP11-743K16, co... 42 0.97 5
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 32 1.3 10
(AC165960) Mus musculus BAC clone RP23-395M20 from chromosom... 36 1.6 2
(AC021761) Homo sapiens chromosome 11, clone RP11-361M6, com... 36 1.6 2
(AC122481) Mus musculus BAC clone RP24-357O20 from chromosom... 36 1.6 2
(AC148507) Carollia perspicillata clone 503H15, WORKING DRAF... 36 1.7 2
(AP001817) Homo sapiens genomic DNA, chromosome 4q22-q24, cl... 36 1.7 2
(AM452899) Vitis vinifera contig VV78X017959.1, whole genome... 38 2.1 2
(EJ031311) 1095454047985 Global-Ocean-Sampling_GS-26-01-01-1... 36 2.1 2
(EU162609) Cleome spinosa clone contig83 BAC sequence. 40 2.3 7
(BG591942) EST499784 P. infestans-challenged leaf Solanum tu... 44 2.3 2
(AY936575) Phyllanthus amarus voucher Ralimanana et al. 280 ... 46 3.1 1
(AY936574) Phyllanthus amarus voucher Philcox 7651 trnK gene... 46 3.1 1
(AY830280) Reverchonia arenaria trnK gene, partial sequence;... 46 3.1 1
(AP004895) Lotus japonicus genomic DNA, chromosome 1, clone:... 46 3.1 1
(AC186136) Medicago truncatula chromosome 7 BAC clone mth2-5... 46 3.1 1
(AC092997) Homo sapiens 3 BAC RP11-711L14 (Roswell Park Canc... 46 3.1 1
(AC007157) Homo sapiens, clone hRPK.78_A_1, complete sequence. 46 3.1 1
(CU856261) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.1 1
(AC026611) Homo sapiens chromosome 3 clone RP11-711L14 map 3... 46 3.1 1
(CU464013) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.1 1
(AP007855) Lotus japonicus genomic DNA, chromosome 1, clone:... 46 3.1 1
(CR346485) mte1-8L6FM1 BAC end, cultivar Jemalong A17 of Med... 46 3.1 1
(EH662681) Mg_Hae03_04D01 Hae03 Mytilus galloprovincialis cD... 46 3.1 1
(AM879563) Mytilus edulis EST, 5' end sequence, clone mytilu... 46 3.1 1
(AM342998) Oryzias latipes EST, clone FOE002-P00132-DPE-F_C22. 46 3.1 1
(AJ624806) Mytilus galloprovincialis EST, clone GPPD03541. 46 3.1 1
(AJ516647) Mytilus galloprovincialis EST, clone GPPD00660. 46 3.1 1
(AJ516615) Mytilus galloprovincialis EST, clone GPPD00622. 46 3.1 1
(AJ516414) Mytilus galloprovincialis EST, clone GPPD00377. 46 3.1 1
(FD547817) RR3FR42JQ RR3(NY) Raphanus raphanistrum subsp. ra... 46 3.1 1
(AA042874) zk56c02.s1 Soares_pregnant_uterus_NbHPU Homo sapi... 46 3.1 1
(CJ455590) Macaca fascicularis mRNA, clone: QflA-21378, 5' e... 38 3.1 2
(AM436023) Vitis vinifera contig VV78X038080.10, whole genom... 38 3.3 2
(AF525505) Fusobacterium nucleatum outer membrane protein ge... 34 3.3 4
(AX345961) Sequence 1032 from Patent WO0200928. 38 5.0 3
(AE014816) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 5.3 8
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 34 5.8 9
(DQ642846) Plasmodium falciparum HB3 apicoplast, complete ge... 32 6.2 6
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 32 8.8 14
>(BJ422452) Dictyostelium discoideum cDNA clone:ddv45p21, 5' end,
single read.
Length = 647
Score = 1277 bits (644), Expect = 0.0
Identities = 647/647 (100%)
Strand = Plus / Plus
Query: 1 tgatactccatcatttagagatgaaaatggtaattggttaagactttatgatggttcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatactccatcatttagagatgaaaatggtaattggttaagactttatgatggttcaat 60
Query: 61 cgtttctagtgatccaatagtttattttaaattaccatcaattccaagatcagtcggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgtttctagtgatccaatagtttattttaaattaccatcaattccaagatcagtcggcta 120
Query: 121 taattcattttcaaatattacatttttatatgataatattaatatgacaagggatcaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taattcattttcaaatattacatttttatatgataatattaatatgacaagggatcaaga 180
Query: 181 tttttataatattgcatatttagaaaatgatgaaattccacgtgatttaccattttcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttttataatattgcatatttagaaaatgatgaaattccacgtgatttaccattttcatt 240
Query: 241 aatttctttagatccagtaacttattcttatttaacttcagttagattaattaataatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatttctttagatccagtaacttattcttatttaacttcagttagattaattaataatat 300
Query: 301 tatgtacccattcacttttgatccaaccattaataaattcacaagtaaatttgttattcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatgtacccattcacttttgatccaaccattaataaattcacaagtaaatttgttattcc 360
Query: 361 agcaaatactgcattcgataagatttcatttgcaattattggtggtttatcaacagaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcaaatactgcattcgataagatttcatttgcaattattggtggtttatcaacagaatt 420
Query: 421 ttattattcaggttttacaattaataattcaccagctttcgataatgaaggtccattatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttattattcaggttttacaattaataattcaccagctttcgataatgaaggtccattatt 480
Query: 481 tagtgaattctaccnaagtaaatgaaaatactacttattcctctttaggttatccaaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tagtgaattctaccnaagtaaatgaaaatactacttattcctctttaggttatccaaaaa 540
Query: 541 cttctggttggagatttagaatcactgataaatacaatggtttcagaaatggttttatta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cttctggttggagatttagaatcactgataaatacaatggtttcagaaatggttttatta 600
Query: 601 aagctatggggttcagttgatagtacaattattaaattaaacttcac 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagctatggggttcagttgatagtacaattattaaattaaacttcac 647
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,264,868,239
Number of extensions: 78522635
Number of successful extensions: 6637052
Number of sequences better than 10.0: 85
Length of query: 1227
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1203
Effective length of database: 97,308,875,965
Effective search space: 117062577785895
Effective search space used: 117062577785895
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home