Dictyostelium discoideum cDNA Clone VHG723

Sequence VHG723

CTTTTTAATT GTTGCAAAAC AATCAGCTCC AGCCCTTAAA GCCAATACTA
ATTATCAATT TTCATTTGAT TTCAAATTAG GCCAAGTTTT GACTCAAGGT
ATTACCTATT CAAATATGAC TCTTTCATTC TACAAACCAG GTGATATTGA
TTATCTTTTA TGGAGTTATA GAGCACCAAT GTATTCTTTT ACTTTTACCG
GTGATTTTTC ATCAACTACA TATAAAAGTA AAACCATTAC TTTCAGTGTT
CCAGTTGATC TTGGTCTTTC AACTTTAATT CTTCAAGTCA ATCGTTCAAG
AGCAATGGAT TATGATGATA CCACTATTTT CTATAAAAAT ATGAAGATCA
CTGTTCCATC TAAACCAGTA GTAGCACCAC CAAATTTAAT AACCAAAGAT
TCTGAATTAA TTAATATTCC AAAAGCATCC GTTTCATTAG ATCCACAAGA
TTTATCAACT TGTCCATACC TTGCTTCTGA TTTAGTCCAT TGGCATAATC
CATCGACATG GTCAAATAAT CTCGTTCCAC AACCAAATGA AAATATTACA
ATTCCAGCCG GAAAAAGAGT TTTAATTAGT CCATGTTCAA TTTCACAAAC
CGCAATTTAC C--------- -ACGAAGGTG ATTCATTCGT TGGTAGTGTT
AGTTTATTCG GTGATGGTAT CACTGATGTT AGAAAGACAG CAATCACCCG
TAATGCCGGT ATCACTGGTA TCACTAGCAC AGGCTGGATG TTATGGTTAG
ATGGTGGTTC ACCAACCTAT TTACAAGTTT GGGCTGCCCA AGTCGCCTAT
CAACAATATA TCTTTTTGGC AATTCCATAT CCACCAGGTA CAACATTCAC
CATTTCAACT GAAAATAAAT GGGCTTGGCA AAATGCTTAT GGTTTCAATT
GTACTCTTGC TTCATCTGCT GCTGAAGTTA GAAGTAGTAA TGGAACCAAA
TACTATTTCG ATCAAACTCA TTTATTCGTT AAAATTGTTA ACCCAGTTTT
AACAGGTTCT CCAGCTGAAT CTTTCAATAG AGGTGGTGCT AAAATTGATG
ACGTTTATTG GGAATACATT TACCATATCA ATGCTACAAA TCCAAATGTT
TCTCCAAATC AAGATGGTTT CTATACAAAT TTATCTTATA CTTTACCTTC
TTCAACTTTA TAAAAAAAAT AAAAAATAAT ATTTAAATTA TTTATTTAAA
AAAA

Translated Amino Acid Sequence VHG723

FLIVAKQSAPALKANTNYQFSFDFKLGQVLTQGITYSNMTLSFYKPGDIDYLLWSYRAPM
YSFTFTGDFSSTTYKSKTITFSVPVDLGLSTLILQVNRSRAMDYDDTTIFYKNMKITVPS
KPVVAPPNLITKDSELINIPKASVSLDPQDLSTCPYLASDLVHWHNPSTWSNNLVPQPNE
NITIPAGKRVLISPCSISQTAIY---

---EGDSFVGSVSLFGDGITDVRKTAITRNAGITGITSTGWMLWLDGGSPTYLQVWAAQV
AYQQYIFLAIPYPPGTTFTISTENKWAWQNAYGFNCTLASSAAEVRSSNGTKYYFDQTHL
FVKIVNPVLTGSPAESFNRGGAKIDDVYWEYIYHINATNPNVSPNQDGFYTNLSYTLPSS
TL*kk*kiifklfi*k

Homology VHG723 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHG723 (VHG723Q) /CSM/VH/VHG7-A/VHG723Q.Seq.d/                       2238   0.0
VSD791 (VSD791Q) /CSM/VS/VSD7-D/VSD791Q.Seq.d/                       1066   0.0
VSD475 (VSD475Q) /CSM/VS/VSD4-D/VSD475Q.Seq.d/                       1066   0.0
VHO882 (VHO882Q) /CSM/VH/VHO8-D/VHO882Q.Seq.d/                       1066   0.0
VHK676 (VHK676Q) /CSM/VH/VHK6-D/VHK676Q.Seq.d/                       1066   0.0
VHH761 (VHH761Q) /CSM/VH/VHH7-C/VHH761Q.Seq.d/                       1066   0.0
VHJ113 (VHJ113Q) /CSM/VH/VHJ1-A/VHJ113Q.Seq.d/                       1051   0.0
VHG112 (VHG112Q) /CSM/VH/VHG1-A/VHG112Q.Seq.d/                       1031   0.0
VHG195 (VHG195Q) /CSM/VH/VHG1-D/VHG195Q.Seq.d/                       1029   0.0
VHJ857 (VHJ857Q) /CSM/VH/VHJ8-C/VHJ857Q.Seq.d/                       1025   0.0

Homology VHG723 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ421896) Dictyostelium discoideum cDNA clone:ddv44n05, 5' ...  1211   0.0    1
(AU264570) Dictyostelium discoideum vegetative cDNA clone:VS...  1068   0.0    1
(AU264096) Dictyostelium discoideum vegetative cDNA clone:VS...  1068   0.0    1
(BJ445831) Dictyostelium discoideum cDNA clone:ddv60d22, 3' ...  1068   0.0    1
(BJ443407) Dictyostelium discoideum cDNA clone:ddv52g20, 3' ...  1068   0.0    1
(BJ441410) Dictyostelium discoideum cDNA clone:ddv46j15, 3' ...  1068   0.0    1
(BJ440600) Dictyostelium discoideum cDNA clone:ddv44n05, 3' ...  1068   0.0    1
(BJ442189) Dictyostelium discoideum cDNA clone:ddv49i03, 3' ...  1053   0.0    1
(BJ440239) Dictyostelium discoideum cDNA clone:ddv43g03, 3' ...   977   0.0    2
(BJ440512) Dictyostelium discoideum cDNA clone:ddv43m23, 3' ...   977   0.0    2

Homology VHG723 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54YG8) RecName: Full=Protein rliB; AltName: Full=Repressed aft...   384   e-105
AC116984_193(AC116984|pid:none) Dictyostelium discoideum chromos...   204   6e-51
(Q54LY1) RecName: Full=G8 domain-containing protein DDB_G0286311...   187   7e-46
(Q54L52) RecName: Full=G8 domain-containing protein DDB_G0286897...   182   4e-44
(Q54XG9) RecName: Full=G8 domain-containing protein DDB_G0278975...   173   1e-41
CP001576_63(CP001576|pid:none) Micromonas sp. RCC299 chromosome ...    43   0.030
CP000909_1416(CP000909|pid:none) Chloroflexus aurantiacus J-10-f...    39   0.73
AF138341_1(AF138341|pid:none) HIV-1 p7c044-61 from USA envelope ...    36   4.7
CP001656_5757(CP001656|pid:none) Paenibacillus sp. JDR-2, comple...    35   8.1

Homology VHG723 vs Genome