Homology VHG101 vs DNA
Query= VHG101 (VHG101Q) /CSM/VH/VHG1-A/VHG101Q.Seq.d/
(1124 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 1251 0.0 1
(BJ421525) Dictyostelium discoideum cDNA clone:ddv43a01, 5' ... 1251 0.0 1
(BJ425130) Dictyostelium discoideum cDNA clone:ddv54a20, 5' ... 1247 0.0 1
(BJ421253) Dictyostelium discoideum cDNA clone:ddv41p04, 5' ... 1126 0.0 1
(BJ422068) Dictyostelium discoideum cDNA clone:ddv44a19, 5' ... 1072 0.0 1
(BJ420458) Dictyostelium discoideum cDNA clone:ddv39j07, 5' ... 989 0.0 1
(BJ419445) Dictyostelium discoideum cDNA clone:ddv36k02, 5' ... 983 0.0 1
(BJ423077) Dictyostelium discoideum cDNA clone:ddv48a06, 5' ... 959 0.0 1
(BJ425156) Dictyostelium discoideum cDNA clone:ddv54f22, 5' ... 918 0.0 1
(BJ427375) Dictyostelium discoideum cDNA clone:ddv62a09, 5' ... 882 0.0 1
(BJ423464) Dictyostelium discoideum cDNA clone:ddv49e12, 5' ... 833 0.0 1
(BJ419727) Dictyostelium discoideum cDNA clone:ddv37c01, 5' ... 731 0.0 1
(BJ422233) Dictyostelium discoideum cDNA clone:ddv45d12, 5' ... 648 0.0 1
(BJ426491) Dictyostelium discoideum cDNA clone:ddv59o03, 5' ... 632 e-177 1
(BJ440203) Dictyostelium discoideum cDNA clone:ddv43a01, 3' ... 595 e-174 3
(AU262230) Dictyostelium discoideum vegetative cDNA clone:VS... 579 e-168 2
(BJ440786) Dictyostelium discoideum cDNA clone:ddv44a19, 3' ... 575 e-167 2
(BJ427104) Dictyostelium discoideum cDNA clone:ddv61e10, 5' ... 571 e-165 2
(BJ421505) Dictyostelium discoideum cDNA clone:ddv42l19, 5' ... 595 e-165 1
(BJ438371) Dictyostelium discoideum cDNA clone:ddv37p17, 3' ... 565 e-165 3
(BJ438927) Dictyostelium discoideum cDNA clone:ddv38m19, 3' ... 569 e-165 2
(BJ433703) Dictyostelium discoideum cDNA clone:ddv22o13, 3' ... 567 e-164 2
(BJ423018) Dictyostelium discoideum cDNA clone:ddv47f19, 5' ... 589 e-164 1
(BJ445520) Dictyostelium discoideum cDNA clone:ddv59p16, 3' ... 579 e-164 2
(BJ445991) Dictyostelium discoideum cDNA clone:ddv61e10, 3' ... 559 e-162 2
(BJ422169) Dictyostelium discoideum cDNA clone:ddv45h02, 5' ... 583 e-162 1
(BJ446517) Dictyostelium discoideum cDNA clone:ddv62p23, 3' ... 571 e-161 2
(AU264417) Dictyostelium discoideum vegetative cDNA clone:VS... 579 e-161 1
(BJ446822) Dictyostelium discoideum cDNA clone:ddv63o20, 3' ... 579 e-161 1
(BJ445813) Dictyostelium discoideum cDNA clone:ddv60a19, 3' ... 579 e-161 1
(BJ445803) Dictyostelium discoideum cDNA clone:ddv60o13, 3' ... 579 e-161 1
(BJ445768) Dictyostelium discoideum cDNA clone:ddv60g17, 3' ... 579 e-161 1
(BJ445347) Dictyostelium discoideum cDNA clone:ddv59o03, 3' ... 579 e-161 1
(BJ444912) Dictyostelium discoideum cDNA clone:ddv57h22, 3' ... 579 e-161 1
(BJ444858) Dictyostelium discoideum cDNA clone:ddv57l17, 3' ... 579 e-161 1
(BJ444552) Dictyostelium discoideum cDNA clone:ddv56b19, 3' ... 579 e-161 1
(BJ444471) Dictyostelium discoideum cDNA clone:ddv56a13, 3' ... 579 e-161 1
(BJ444156) Dictyostelium discoideum cDNA clone:ddv55n09, 3' ... 579 e-161 1
(BJ443979) Dictyostelium discoideum cDNA clone:ddv54f22, 3' ... 579 e-161 1
(BJ443953) Dictyostelium discoideum cDNA clone:ddv54a20, 3' ... 579 e-161 1
(BJ443950) Dictyostelium discoideum cDNA clone:ddv54p17, 3' ... 579 e-161 1
(BJ443825) Dictyostelium discoideum cDNA clone:ddv54b09, 3' ... 579 e-161 1
(BJ443717) Dictyostelium discoideum cDNA clone:ddv53j22, 3' ... 579 e-161 1
(BJ443397) Dictyostelium discoideum cDNA clone:ddv52e22, 3' ... 579 e-161 1
(BJ442249) Dictyostelium discoideum cDNA clone:ddv49e12, 3' ... 579 e-161 1
(BJ441827) Dictyostelium discoideum cDNA clone:ddv48a06, 3' ... 579 e-161 1
(BJ441787) Dictyostelium discoideum cDNA clone:ddv47j22, 3' ... 579 e-161 1
(BJ441767) Dictyostelium discoideum cDNA clone:ddv47f19, 3' ... 579 e-161 1
(BJ441341) Dictyostelium discoideum cDNA clone:ddv46m10, 3' ... 579 e-161 1
(BJ440944) Dictyostelium discoideum cDNA clone:ddv45o03, 3' ... 579 e-161 1
(BJ440905) Dictyostelium discoideum cDNA clone:ddv45h02, 3' ... 579 e-161 1
(BJ440902) Dictyostelium discoideum cDNA clone:ddv45g05, 3' ... 579 e-161 1
(BJ440749) Dictyostelium discoideum cDNA clone:ddv44i16, 3' ... 579 e-161 1
(BJ439077) Dictyostelium discoideum cDNA clone:ddv39j07, 3' ... 579 e-161 1
(BJ438934) Dictyostelium discoideum cDNA clone:ddv38n20, 3' ... 579 e-161 1
(BJ438786) Dictyostelium discoideum cDNA clone:ddv38p12, 3' ... 579 e-161 1
(BJ438470) Dictyostelium discoideum cDNA clone:ddv37d04, 3' ... 579 e-161 1
(BJ438461) Dictyostelium discoideum cDNA clone:ddv37c01, 3' ... 579 e-161 1
(BJ438134) Dictyostelium discoideum cDNA clone:ddv36p10, 3' ... 579 e-161 1
(BJ437384) Dictyostelium discoideum cDNA clone:ddv34h05, 3' ... 579 e-161 1
(BJ437286) Dictyostelium discoideum cDNA clone:ddv33d21, 3' ... 579 e-161 1
(BJ437279) Dictyostelium discoideum cDNA clone:ddv33c19, 3' ... 579 e-161 1
(BJ437031) Dictyostelium discoideum cDNA clone:ddv33a03, 3' ... 579 e-161 1
(BJ436689) Dictyostelium discoideum cDNA clone:ddv31o21, 3' ... 579 e-161 1
(BJ436271) Dictyostelium discoideum cDNA clone:ddv30k14, 3' ... 579 e-161 1
(BJ429592) Dictyostelium discoideum cDNA clone:ddv4h03, 3' e... 579 e-161 1
(BJ420173) Dictyostelium discoideum cDNA clone:ddv38p12, 5' ... 579 e-161 1
(BJ446075) Dictyostelium discoideum cDNA clone:ddv61g14, 3' ... 571 e-158 1
(BJ443692) Dictyostelium discoideum cDNA clone:ddv53e21, 3' ... 571 e-158 1
(BJ442118) Dictyostelium discoideum cDNA clone:ddv48k24, 3' ... 571 e-158 1
(BJ441249) Dictyostelium discoideum cDNA clone:ddv46k06, 3' ... 571 e-158 1
(BJ441124) Dictyostelium discoideum cDNA clone:ddv45b20, 3' ... 571 e-158 1
(BJ440973) Dictyostelium discoideum cDNA clone:ddv45d12, 3' ... 571 e-158 1
(AU263049) Dictyostelium discoideum vegetative cDNA clone:VS... 513 e-158 4
(BJ446027) Dictyostelium discoideum cDNA clone:ddv61l12, 3' ... 470 e-155 2
(BJ439496) Dictyostelium discoideum cDNA clone:ddv40l13, 3' ... 561 e-155 1
(BJ444454) Dictyostelium discoideum cDNA clone:ddv56n07, 3' ... 555 e-153 1
(BJ439666) Dictyostelium discoideum cDNA clone:ddv41p04, 3' ... 551 e-152 1
(BJ440190) Dictyostelium discoideum cDNA clone:ddv42n19, 3' ... 547 e-151 1
(BJ440108) Dictyostelium discoideum cDNA clone:ddv42l18, 3' ... 527 e-145 1
(AU270882) Dictyostelium discoideum vegetative cDNA clone:VS... 511 e-140 1
(BJ425752) Dictyostelium discoideum cDNA clone:ddv56b19, 5' ... 507 e-139 1
(BJ424693) Dictyostelium discoideum cDNA clone:ddv53c08, 5' ... 507 e-139 1
(BJ425657) Dictyostelium discoideum cDNA clone:ddv56n07, 5' ... 488 e-133 1
(BJ422167) Dictyostelium discoideum cDNA clone:ddv45g05, 5' ... 488 e-133 1
(BJ418718) Dictyostelium discoideum cDNA clone:ddv33c19, 5' ... 488 e-133 1
(BJ417440) Dictyostelium discoideum cDNA clone:ddv30j17, 5' ... 484 e-132 1
(BJ424875) Dictyostelium discoideum cDNA clone:ddv53j22, 5' ... 470 e-128 1
(BJ438029) Dictyostelium discoideum cDNA clone:ddv36k02, 3' ... 444 e-126 2
(BJ423347) Dictyostelium discoideum cDNA clone:ddv48k24, 5' ... 460 e-125 1
(BJ440182) Dictyostelium discoideum cDNA clone:ddv42l19, 3' ... 420 e-116 2
(BJ415476) Dictyostelium discoideum cDNA clone:ddv22o13, 5' ... 418 e-112 1
(AU267042) Dictyostelium discoideum vegetative cDNA clone:VS... 391 e-112 2
(AU270883) Dictyostelium discoideum vegetative cDNA clone:VS... 387 e-103 1
(AU275049) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 329 1e-85 1
(BJ418725) Dictyostelium discoideum cDNA clone:ddv33d21, 5' ... 327 5e-85 1
(BJ425330) Dictyostelium discoideum cDNA clone:ddv55k09, 5' ... 321 3e-83 1
(BJ426015) Dictyostelium discoideum cDNA clone:ddv57h22, 5' ... 313 8e-81 1
(BJ427181) Dictyostelium discoideum cDNA clone:ddv61g14, 5' ... 274 5e-80 2
(AU275048) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 309 1e-79 1
>(AC116305) Dictyostelium discoideum chromosome 2 map 1005175-1418323
strain AX4, complete sequence.
Length = 413138
Score = 1251 bits (631), Expect = 0.0
Identities = 631/631 (100%)
Strand = Plus / Minus
Query: 1 tatagaggtttattaccacaagaaatctttacaaaaggtgatatttattctccaccattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232802 tatagaggtttattaccacaagaaatctttacaaaaggtgatatttattctccaccattc 232743
Query: 61 ggtttagaatgtgctggttatattacacgtgttgcaccaagtggcgttactcgtttcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232742 ggtttagaatgtgctggttatattacacgtgttgcaccaagtggcgttactcgtttcaaa 232683
Query: 121 gttggtgatcaagttgttggttttgcaagccattctttaagttcactagctattactcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232682 gttggtgatcaagttgttggttttgcaagccattctttaagttcactagctattactcat 232623
Query: 181 caagataaaattgtattaaaacctgaaaatatttcattcaatgaagctgctgccgtttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232622 caagataaaattgtattaaaacctgaaaatatttcattcaatgaagctgctgccgtttgt 232563
Query: 241 gtagtttatgcaacaagttattattcaattttccatattggtgcatttatggccgataaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232562 gtagtttatgcaacaagttattattcaattttccatattggtgcatttatggccgataaa 232503
Query: 301 gaatcaatcctagttcattctgcaactggtggtgttggtttagcaactttaaatctttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232502 gaatcaatcctagttcattctgcaactggtggtgttggtttagcaactttaaatctttta 232443
Query: 361 aaatggaagagaaatcaattgaaaaaacatggcaactctgaaattagtaatgatgcttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232442 aaatggaagagaaatcaattgaaaaaacatggcaactctgaaattagtaatgatgcttca 232383
Query: 421 atttatgctacagtgggttctaaagaaaaagtcgattatttacaagagaaatatggtgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232382 atttatgctacagtgggttctaaagaaaaagtcgattatttacaagagaaatatggtgat 232323
Query: 481 ttaataactgcaatttacaatagtagagatactgaatattgcgatgaaattaaacaacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232322 ttaataactgcaatttacaatagtagagatactgaatattgcgatgaaattaaacaacaa 232263
Query: 541 tcagcacaaggaggtgtagatttaattttaaatacactctctggtgattatttatctgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232262 tcagcacaaggaggtgtagatttaattttaaatacactctctggtgattatttatctgca 232203
Query: 601 aatttccgttcactttcccaagttggtagaa 631
|||||||||||||||||||||||||||||||
Sbjct: 232202 aatttccgttcactttcccaagttggtagaa 232172
Score = 850 bits (429), Expect(2) = 0.0
Identities = 450/457 (98%)
Strand = Plus / Plus
Query: 175 actcatcaagataaaattgtattaaaacctgaaaatatttcattcaatgaagctgctgcc 234
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212718 actcatcaaaataaaattgtattaaaacctgaaaatatttcattcaatgaagctgctgcc 212777
Query: 235 gtttgtgtagtttatgcaacaagttattattcaattttccatattggtgcatttatggcc 294
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 212778 gtttgtgtagtttatgcaacaagttattattcaattttccatattggtgcttttattgcc 212837
Query: 295 gataaagaatcaatcctagttcattctgcaactggtggtgttggtttagcaactttaaat 354
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 212838 gataaagaatcaatcctagttcattctgcaactggtggtgttggtttagcaagtttaaat 212897
Query: 355 cttttaaaatggaagagaaatcaattgaaaaaacatggcaactctgaaattagtaatgat 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212898 cttttaaaatggaagagaaatcaattgaaaaaacatggcaactctgaaattagtaatgat 212957
Query: 415 gcttcaatttatgctacagtgggttctaaagaaaaagtcgattatttacaagagaaatat 474
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 212958 gcttcaatttatgctacagtgggttccaaagaaaaaatcgattatttacaagagaaatat 213017
Query: 475 ggtgatttaataactgcaatttacaatagtagagatactgaatattgcgatgaaattaaa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213018 ggtgatttaataactgcaatttacaatagtagagatactgaatattgcgatgaaattaaa 213077
Query: 535 caacaatcagcacaaggaggtgtagatttaattttaaatacactctctggtgattattta 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213078 caacaatcagcacaaggaggtgtagatttaattttaaatacactctctggtgattattta 213137
Query: 595 tctgcaaatttccgttcactttcccaagttggtagaa 631
||| |||||||||||||||||||||||||||||||||
Sbjct: 213138 tcttcaaatttccgttcactttcccaagttggtagaa 213174
Score = 313 bits (158), Expect(2) = 0.0
Identities = 164/166 (98%)
Strand = Plus / Plus
Query: 1 tatagaggtttattaccacaagaaatctttacaaaaggtgatatttattctccaccattc 60
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 212544 tatagaggtttattaccacaagaagtcttttcaaaaggtgatatttattctccaccattc 212603
Query: 61 ggtttagaatgtgctggttatattacacgtgttgcaccaagtggcgttactcgtttcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212604 ggtttagaatgtgctggttatattacacgtgttgcaccaagtggcgttactcgtttcaaa 212663
Query: 121 gttggtgatcaagttgttggttttgcaagccattctttaagttcac 166
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212664 gttggtgatcaagttgttggttttgcaagccattctttaagttcac 212709
Score = 579 bits (292), Expect(3) = e-164
Identities = 320/333 (96%)
Strand = Plus / Minus
Query: 643 cacctcaaatgaagagaaaaatgggtcaccacctaacaaattataaaacttcatntgnta 702
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 231031 cacctcaaatgaagagaaaaatgggtcaccacctaacaaattataaaacttcatctgcta 230972
Query: 703 gctntgatgatccattgggtgattntagttntactcaagcaaaagtcatttntacaatnt 762
||| ||||||| |||||||||||| ||||| |||||||||||||||||||| |||||| |
Sbjct: 230971 gctctgatgattcattgggtgattctagttctactcaagcaaaagtcatttctacaatct 230912
Query: 763 ntgaattattatcaattcatccatcaaaattaaatttagatacaagattaaaagactatg 822
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230911 ctgaattattatcaattcatccatcaaaattaaatttagatacaagattaaaagactatg 230852
Query: 823 gtattgattntttattaacagnacaattaaagaattggatagataaagaatttacaaaga 882
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 230851 gtattgattctttattaacagtacaattaaagaattggatagataaagaatttacaaaga 230792
Query: 883 atttattcactcatttacaattatcatcaagtagtattaatagtatcattcanagaatta 942
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 230791 atttattcactcatttacaattatcatcaagtagtattaatagtatcattcagagaatta 230732
Query: 943 gttcaaaatcaacttcaacatttactcccaatc 975
||||||||||||||||||||| |||||||||||
Sbjct: 230731 gttcaaaatcaacttcaacatctactcccaatc 230699
Score = 52.0 bits (26), Expect(3) = e-164
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1041 tttgacncttctatgtttattccatattt 1069
|||||| ||||||||||||||||||||||
Sbjct: 230633 tttgacacttctatgtttattccatattt 230605
Score = 30.2 bits (15), Expect(3) = e-164
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1110 tatcttttaatatta 1124
|||||||||||||||
Sbjct: 230564 tatcttttaatatta 230550
Score = 555 bits (280), Expect = e-153
Identities = 317/333 (95%)
Strand = Plus / Plus
Query: 643 cacctcaaatgaagagaaaaatgggtcaccacctaacaaattataaaacttcatntgnta 702
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 214315 cacctcaaatgaagagaaaaatggatcaccacctaacaaattataaaacttcatctgcta 214374
Query: 703 gctntgatgatccattgggtgattntagttntactcaagcaaaagtcatttntacaatnt 762
| | ||||||| |||||||||||| | ||| |||||||||||||||||||| |||||| |
Sbjct: 214375 gttctgatgattcattgggtgattctggttctactcaagcaaaagtcatttctacaatct 214434
Query: 763 ntgaattattatcaattcatccatcaaaattaaatttagatacaagattaaaagactatg 822
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214435 ctgaattattatcaattcatccatcaaaattaaatttagatacaagattaaaagactatg 214494
Query: 823 gtattgattntttattaacagnacaattaaagaattggatagataaagaatttacaaaga 882
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 214495 gtattgattctttattaacagtacaattaaagaattggatagataaagaatttacaaaga 214554
Query: 883 atttattcactcatttacaattatcatcaagtagtattaatagtatcattcanagaatta 942
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 214555 atttattcactcatttacaattatcatcaagtagtattaatagtatcattcagagaatta 214614
Query: 943 gttcaaaatcaacttcaacatttactcccaatc 975
||||||||||||||||||||| |||||||||||
Sbjct: 214615 gttcaaaatcaacttcaacatctactcccaatc 214647
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,204,725,079
Number of extensions: 71329088
Number of successful extensions: 5645084
Number of sequences better than 10.0: 145
Length of query: 1124
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1100
Effective length of database: 97,308,875,965
Effective search space: 107039763561500
Effective search space used: 107039763561500
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home