Dictyostelium discoideum cDNA Clone VHF682

Sequence VHF682

TTATGGAAAT GATCCGTATG TAAAAACCTT CGAATATCCT ACAGAGCAGT
ATTATATAAG TGAGGAAGAC GCCGGACAAT TCGAAATAGA TTATTTATTA
CATTATTCAA CAAAACTAGA GAGACATTCA CAATATTTAT TAAAGANAAA
AGAAAATTAT AATCCTAAGC AACCACAAAT ATTGGAAACG GATTCGAGAT
CCGAACATTA TTTAATGAAT TATTTTTATT ATAATAAACT CGAAAATGTT
TTAGAAAAAA AAGAAGGAAT AGATGATGCT GAAGTTTATA AGTTTATAAA
ATTAGATTTT GGTGAAAAAA TGGAGTTAAA ATTAGAGAAA TTTTATGATC
TGAATAGAGA AAGAAGATTC CGAGTAAAAA AATTAAGCCA ATCAAAACTA
TATGAGTTTG AAAAAGCTGC ATTGAAAGG- ---------A GATGTTTTAC
ATAGTTGGGC GATTCCATCA TTTGGAATAA AAGTAGATGC CGTACCAGGA
CGATTAAATC AAATTGGATT GTATGTAAAA AGAGAAGGTA CATTCTATGG
ACAATGTAGT GAATTATGTG GAGTAGATCA TGGATTTATG CCAATTAAAG
TTCAAGCTGT TAAATTAGGA GAGTATTTTT CAAAACTAAA TGAAAAATAA
CATCNATAAT AATAAAGTCT TAAAGGCAGC CGTCGACCCA TTCNTATTAC
AAGCNTTTGG ATTTACAGGA TTGGGCGTAA TGGGTGGCGT AATGGGTGTA
ATTATAGTTG TGGTTACATT CAAGTATGCG CTGGCATCTT ACGAGATCCA
CGTAAATGTA ATACAAAAGG GAACACAAAT GCTATTAGAG GCGACATTAG
GACATGAGGT AGGAGTAAAG AGAGACGTAT TTGAGAAAGT ATTCGAATTA
TTTAAAAC

Translated Amino Acid Sequence VHF682

YGNDPYVKTFEYPTEQYYISEEDAGQFEIDYLLHYSTKLERHSQYLLKXKENYNPKQPQI
LETDSRSEHYLMNYFYYNKLENVLEKKEGIDDAEVYKFIKLDFGEKMELKLEKFYDLNRE
RRFRVKKLSQSKLYEFEKAALK---

---DVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAV
KLGEYFSKLNEK*hx***slkgsrrpixitsxwiyrigrngwrngcnyscgyiqvcagil
rdprkcntkgntnairgdirt*grskerri*esirii*n

Homology VHF682 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHF682 (VHF682Q) /CSM/VH/VHF6-D/VHF682Q.Seq.d/                       1628   0.0
VHB379 (VHB379Q) /CSM/VH/VHB3-D/VHB379Q.Seq.d/                        904   0.0
MIT-GENOME (MIT-GENOMEQ) /CSM/OTHERS/MIT-GENOMEQ.Seq.d/               904   0.0
VFN289 (VFN289Q) /CSM/VF/VFN2-D/VFN289Q.Seq.d/                        896   0.0
CHQ235 (CHQ235Q) /CSM/CH/CHQ2-B/CHQ235Q.Seq.d/                        882   0.0
VHD502 (VHD502Q) /CSM/VH/VHD5-A/VHD502Q.Seq.d/                        868   0.0
VSG767 (VSG767Q) /CSM/VS/VSG7-C/VSG767Q.Seq.d/                        680   0.0
VHK641 (VHK641Q) /CSM/VH/VHK6-B/VHK641Q.Seq.d/                        628   e-179
VHI704 (VHI704Q) /CSM/VH/VHI7-A/VHI704Q.Seq.d/                        567   e-160
CHM219 (CHM219Q) /CSM/CH/CHM2-A/CHM219Q.Seq.d/                        529   e-149

Homology VHF682 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AB000109) Dictyostelium discoideum mitochondrial DNA, compl...   904   0.0    4
(BJ440143) Dictyostelium discoideum cDNA clone:ddv42c22, 3' ...   912   0.0    1
(BJ437332) Dictyostelium discoideum cDNA clone:ddv33n19, 3' ...   904   0.0    1
(BJ385239) Dictyostelium discoideum cDNA clone:ddc54e10, 3' ...   515   0.0    2
(BJ438628) Dictyostelium discoideum cDNA clone:ddv38c01, 3' ...   868   0.0    1
(BJ416911) Dictyostelium discoideum cDNA clone:ddv27a24, 5' ...   819   0.0    1
(D16579) Dictyostelium discoideum mitochondrial genes for Gl...   498   0.0    3
(BJ421468) Dictyostelium discoideum cDNA clone:ddv42c22, 5' ...   498   0.0    3
(AU266796) Dictyostelium discoideum vegetative cDNA clone:VS...   680   0.0    1
(BJ443211) Dictyostelium discoideum cDNA clone:ddv52a12, 3' ...   371   e-180  3

Homology VHF682 vs Protein

Sequences producing significant alignments:                      (bits) Value


(O21050) RecName: Full=Uncharacterized mitochondrial protein Mp0...   297   6e-79
DQ336395_5(DQ336395|pid:none) Dictyostelium citrinum mitochondri...   162   3e-38
(Q2LCQ0) RecName: Full=Uncharacterized mitochondrial protein Mp0...   161   4e-38
X81884_2(X81884|pid:none) D.discoideum mitochondrial cox1 gene a...   147   1e-33
(O21042) RecName: Full=Cytochrome c oxidase subunit 1+2;        ...   147   1e-33
DQ336395_6(DQ336395|pid:none) Dictyostelium citrinum mitochondri...   130   1e-28
AY700145_35(AY700145|pid:none) Polysphondylium pallidum mitochon...   124   9e-27
EU275726_6(EU275726|pid:none) Polysphondylium pallidum strain PN...   121   5e-26
EU275727_7(EU275727|pid:none) Dictyostelium fasciculatum strain ...   119   2e-25
AB286881_1(AB286881|pid:none) Chattonella marina var. antiqua mi...   111   5e-23

Homology VHF682 vs Genome