Dictyostelium discoideum cDNA Clone VHE294

Sequence VHE294

TATCCATCAC CAATTTCTAA TCAACAACAA CAACAACAAC AACAATCATC
AACTCAACAC CAACACCAAC ACCACCACCA CCAACAACAA CAACAAACTA
GTATAAATTT AAATAGATTA TCAATTAGTG GTAGTCCATC ATTAAGATCA
ATTTCAATTC GTAATGGTGG TAATATTAAT ACATTAAATT CAAGTGGATC
AAATAATTCA AGTCCATTAA AATTCCCAAA TTTAGCATTA TCACCAATTC
GTAATGGTAG TAATTCAAAT TTAACTCATC ATCATGGTAG TAATTCAAGT
TTAAATAATT TATTATCACC ATTAAAGAAT TTACAATTAC AACAAAAGTA
TGATAAATTG AAACTATTAA ATGAAAAAGT GATTTTCTTA CCAAATGAAT
TACCGAATGA ACCACCAATG TCAATGGATA AGATGTTTTT AGATGTTGGT
GAACCAAGAT CTCTTTGTAG AATATTCCAA TTTGAAAAAA AGATACCATC
AAGTTTCTTC CCAAGATTAT TGAGTCAATT GTATATGTTT TGTTCAATTA
AACATTGTTG GAAGAATGGA GTTATCTTGG AG-------- --GCAATTAA
GAATTAAAAT TGCCAAAGGT ATCGCAGCAT CTTTACAAAC GCTTCATGAT
AGTAGACCAT CAGTGGTTCA TCGTGATTTA AAGAGTCCAA ATATCCTACT
CTCAAGTAAA GATTCATTAA CTATGGAATG CCATCTTTGT GATTTCTCAT
TATCAGGCTT CTCAACCACC GTTGCAAATC GTTCGGTTCA AAATCCAGTT
TGGTTAGCTC CAGAGGTAAT AAACAATGAA TTATGTTCGG ATAAAAGTGA
TGTCTATGCA TATGGTGTAA TCCTATTTGA ACTTTTATCA CGTACAAGAT
TCTTTTCAAA TATTACCTTT ATGTCTGAAG TTGAAGGTTT AATTACCGAG
GGTGTACGTC CATCACTACC ATCTCATAAT TTACCAGAGT ATGATAGCCT
TTTAAATATC TGTTGGGCTC AAGATCCAAC TTGTCGTCCT TCCTTTATTG
AAATTACAAA GAAATTAGAA GAAATTGAAC TAATCTTAAA AACTCATACT
CCAGTTGAAC CAGTTTACAC AGAAACTTCA AAGAATCAAC ATATTCAATT
AAATAGAGGA AATACTATAT ATACCCTTGT TAAAAGACCA ATAACACCAA
TTCAACAACA ACAACAACAA AAACAACAAC AACTACAACA ACAAAAACAA
TCTCCAAAAC AATTACAACA ACAAAAACCA TTACCAACTC ATANAAAANA
A

Translated Amino Acid Sequence VHE294

YPSPISNQQQQQQQQSSTQHQHQHHHHQQQQQTSINLNRLSISGSPSLRSISIRNGGNIN
TLNSSGSNNSSPLKFPNLALSPIRNGSNSNLTHHHGSNSSLNNLLSPLKNLQLQQKYDKL
KLLNEKVIFLPNELPNEPPMSMDKMFLDVGEPRSLCRIFQFEKKIPSSFFPRLLSQLYMF
CSIKHCWKNGVILE---

---QLRIKIAKGIAASLQTLHDSRPSVVHRDLKSPNILLSSKDSLTMECHLCDFSLSGFS
TTVANRSVQNPVWLAPEVINNELCSDKSDVYAYGVILFELLSRTRFFSNITFMSEVEGLI
TEGVRPSLPSHNLPEYDSLLNICWAQDPTCRPSFIEITKKLEEIELILKTHTPVEPVYTE
TSKNQHIQLNRGNTIYTLVKRPITPIQQQQQQKQQQLQQQKQSPKQLQQQKPLPTHXKX

Homology VHE294 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHE294 (VHE294Q) /CSM/VH/VHE2-D/VHE294Q.Seq.d/                       2091   0.0
VFO465 (VFO465Q) /CSM/VF/VFO4-C/VFO465Q.Seq.d/                       1209   0.0
AHH160 (AHH160Q) /CSM/AH/AHH1-C/AHH160Q.Seq.d/                       1191   0.0
VHB660 (VHB660Q) /CSM/VH/VHB6-C/VHB660Q.Seq.d/                       1160   0.0
SFD569 (SFD569Q) /CSM/SF/SFD5-C/SFD569Q.Seq.d/                       1142   0.0
VHE712 (VHE712Q) /CSM/VH/VHE7-A/VHE712Q.Seq.d/                        872   0.0
FC-IC1358 (FC-IC1358Q) /CSM/FC-IC/FC-IC1358Q.Seq.d/                   597   e-169
SHC242 (SHC242Q) /CSM/SH/SHC2-B/SHC242Q.Seq.d/                        432   e-120
VHJ601 (VHJ601Q) /CSM/VH/VHJ6-A/VHJ601Q.Seq.d/                         54   6e-06
SHF673 (SHF673Q) /CSM/SH/SHF6-D/SHF673Q.Seq.d/                         54   6e-06

Homology VHE294 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AY232271|AY232271.1 Dictyostelium discoideum putative protei...  1207   0.0    1
AY232268|AY232268.1 Dictyostelium discoideum putative protei...    54   0.010  1
EJ669762|EJ669762.1 1092955054168 Global-Ocean-Sampling_GS-3...    38   0.033  2
EJ670893|EJ670893.1 1092955057048 Global-Ocean-Sampling_GS-3...    38   0.033  2
EK096404|EK096404.1 1092962039889 Global-Ocean-Sampling_GS-3...    38   0.033  2
CQ605966|CQ605966.1 Sequence 33724 from Patent WO0171042.          48   0.64   1
AC017833|AC017833.1 Drosophila melanogaster, *** SEQUENCING ...    48   0.64   1
AC006497|AC006497.5 Drosophila melanogaster strain y; cn bw ...    48   0.64   1
BH166980|BH166980.1 ENTSZ33TF Entamoeba histolytica Sheared ...    48   0.64   1
BH166449|BH166449.1 ENTTS69TR Entamoeba histolytica Sheared ...    48   0.64   1

Homology VHE294 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q6XHA7) RecName: Full=Probable serine/threonine-protein kinase ...   375   e-102
(Q55E58) RecName: Full=Probable serine/threonine-protein kinase ...   132   3e-29
AY170918_1(AY170918|pid:none) Dictyostelium discoideum pats1 gen...   132   3e-29
(Q8MVR1) RecName: Full=Cyclic GMP-binding protein C;          EC...   117   2e-24
(Q1ZXD6) RecName: Full=Probable serine/threonine-protein kinase ...   115   4e-24
EF146477_1(EF146477|pid:none) Populus trichocarpa clone WS0118_H...   108   6e-22
AK356564_1(AK356564|pid:none) Hordeum vulgare subsp. vulgare mRN...   106   3e-21
AC159538_19(AC159538|pid:none) Medicago truncatula clone mth2-48...   105   4e-21
AP005558_11(AP005558|pid:none) Oryza sativa Japonica Group genom...   105   7e-21
FB918162_1(FB918162|pid:none) Sequence 137435 from Patent WO2008...   105   7e-21

Homology VHE294 vs Genome