Homology VHE294 vs DNA
Query= VHE294 (VHE294Q) /CSM/VH/VHE2-D/VHE294Q.Seq.d/
(1301 letters)
Database: /a/DNA.DATA/ddbjhum1.seq;
/a/DNA.DATA/ddbjhum2.seq;
/a/DNA.DATA/ddbjhum3.seq;
/a/DNA.DATA/ddbjhum4.seq;
/a/DNA.DATA/ddbjhum5.seq;
/a/DDBJNEW.DATA/new_ddbjhum.seq;
/a/DNA.DATA/ddbjpri.seq;
/a/DDBJNEW.DATA/new_ddbjpri.seq;
/a/DNA.DATA/ddbjrod1.seq;
/a/DNA.DATA/ddbjrod2.seq;
/a/DNA.DATA/ddbjrod3.seq;
/a/DNA.DATA/ddbjrod4.seq;
/a/DNA.DATA/ddbjrod5.seq;
/a/DDBJNEW.DATA/new_ddbjrod.seq;
/a/DNA.DATA/ddbjmam.seq;
/a/DDBJNEW.DATA/new_ddbjmam.seq;
/a/DNA.DATA/ddbjvrt1.seq;
/a/DNA.DATA/ddbjvrt2.seq;
/a/DNA.DATA/ddbjvrt3.seq;
/a/DDBJNEW.DATA/new_ddbjvrt.seq;
/a/DNA.DATA/ddbjinv1.seq;
/a/DNA.DATA/ddbjinv2.seq;
/a/DDBJNEW.DATA/new_ddbjinv.seq;
/a/DNA.DATA/ddbjpln1.seq;
/a/DNA.DATA/ddbjpln2.seq;
/a/DNA.DATA/ddbjpln3.seq;
/a/DNA.DATA/ddbjpln4.seq;
/a/DDBJNEW.DATA/new_ddbjpln.seq;
/a/DNA.DATA/ddbjbct1.seq;
/a/DNA.DATA/ddbjbct2.seq;
/a/DNA.DATA/ddbjbct3.seq;
/a/DNA.DATA/ddbjbct4.seq;
/a/DDBJNEW.DATA/new_ddbjbct.seq;
/a/DNA.DATA/ddbjvrl1.seq;
/a/DNA.DATA/ddbjvrl2.seq;
/a/DDBJNEW.DATA/new_ddbjvrl.seq;
/a/DNA.DATA/ddbjphg.seq;
/a/DDBJNEW.DATA/new_ddbjphg.seq;
/a/DNA.DATA/ddbjuna.seq;
/a/DDBJNEW.DATA/new_ddbjuna.seq;
/a/DNA.DATA/ddbjgss1.seq;
/a/DNA.DATA/ddbjgss10.seq;
/a/DNA.DATA/ddbjgss11.seq;
/a/DNA.DATA/ddbjgss12.seq;
/a/DNA.DATA/ddbjgss13.seq;
/a/DNA.DATA/ddbjgss14.seq;
/a/DNA.DATA/ddbjgss15.seq;
/a/DNA.DATA/ddbjgss16.seq;
/a/DNA.DATA/ddbjgss17.seq;
/a/DNA.DATA/ddbjgss18.seq;
/a/DNA.DATA/ddbjgss19.seq;
/a/DNA.DATA/ddbjgss2.seq;
/a/DNA.DATA/ddbjgss20.seq;
/a/DNA.DATA/ddbjgss21.seq;
/a/DNA.DATA/ddbjgss22.seq;
/a/DNA.DATA/ddbjgss23.seq;
/a/DNA.DATA/ddbjgss24.seq;
/a/DNA.DATA/ddbjgss25.seq;
/a/DNA.DATA/ddbjgss26.seq;
/a/DNA.DATA/ddbjgss27.seq;
/a/DNA.DATA/ddbjgss28.seq;
/a/DNA.DATA/ddbjgss29.seq;
/a/DNA.DATA/ddbjgss3.seq;
/a/DNA.DATA/ddbjgss30.seq;
/a/DNA.DATA/ddbjgss31.seq;
/a/DNA.DATA/ddbjgss32.seq;
/a/DNA.DATA/ddbjgss33.seq;
/a/DNA.DATA/ddbjgss4.seq;
/a/DNA.DATA/ddbjgss5.seq;
/a/DNA.DATA/ddbjgss6.seq;
/a/DNA.DATA/ddbjgss7.seq;
/a/DNA.DATA/ddbjgss8.seq;
/a/DNA.DATA/ddbjgss9.seq;
/a/DDBJNEW.DATA/new_ddbjgss1.seq;
/a/DDBJNEW.DATA/new_ddbjgss10.seq;
/a/DDBJNEW.DATA/new_ddbjgss11.seq;
/a/DDBJNEW.DATA/new_ddbjgss12.seq;
/a/DDBJNEW.DATA/new_ddbjgss13.seq;
/a/DDBJNEW.DATA/new_ddbjgss14.seq;
/a/DDBJNEW.DATA/new_ddbjgss2.seq;
/a/DDBJNEW.DATA/new_ddbjgss3.seq;
/a/DDBJNEW.DATA/new_ddbjgss4.seq;
/a/DDBJNEW.DATA/new_ddbjgss5.seq;
/a/DDBJNEW.DATA/new_ddbjgss6.seq;
/a/DDBJNEW.DATA/new_ddbjgss7.seq;
/a/DDBJNEW.DATA/new_ddbjgss8.seq;
/a/DDBJNEW.DATA/new_ddbjgss9.seq;
/a/DNA.DATA/ddbjhtg1.seq;
/a/DNA.DATA/ddbjhtg10.seq;
/a/DNA.DATA/ddbjhtg11.seq;
/a/DNA.DATA/ddbjhtg12.seq;
/a/DNA.DATA/ddbjhtg13.seq;
/a/DNA.DATA/ddbjhtg14.seq;
/a/DNA.DATA/ddbjhtg15.seq;
/a/DNA.DATA/ddbjhtg16.seq;
/a/DNA.DATA/ddbjhtg2.seq;
/a/DNA.DATA/ddbjhtg3.seq;
/a/DNA.DATA/ddbjhtg4.seq;
/a/DNA.DATA/ddbjhtg5.seq;
/a/DNA.DATA/ddbjhtg6.seq;
/a/DNA.DATA/ddbjhtg7.seq;
/a/DNA.DATA/ddbjhtg8.seq;
/a/DNA.DATA/ddbjhtg9.seq;
/a/DDBJNEW.DATA/new_ddbjhtg1.seq;
/a/DDBJNEW.DATA/new_ddbjhtg2.seq;
/a/DDBJNEW.DATA/new_ddbjhtg3.seq;
/a/DNA.DATA/ddbjpat1.seq;
/a/DNA.DATA/ddbjpat2.seq;
/a/DNA.DATA/ddbjpat3.seq;
/a/DNA.DATA/ddbjpat4.seq;
/a/DNA.DATA/ddbjpat5.seq;
/a/DDBJNEW.DATA/new_ddbjpat.seq;
/a/DNA.DATA/ddbjsts1.seq;
/a/DNA.DATA/ddbjsts2.seq;
/a/DNA.DATA/ddbjsts3.seq;
/a/DDBJNEW.DATA/new_ddbjsts.seq;
/a/DNA.DATA/ddbjsyn.seq;
/a/DDBJNEW.DATA/new_ddbjsyn.seq;
/a/DNA.DATA/est_atha1.seq;
/a/DDBJNEW.DATA/new_est_atha1.seq;
/a/DNA.DATA/est_btra1.seq;
/a/DDBJNEW.DATA/new_est_btra1.seq;
/a/DNA.DATA/est_cele1.seq;
/a/DNA.DATA/est_crei1.seq;
/a/DDBJNEW.DATA/new_est_crei1.seq;
/a/DNA.DATA/est_cint1.seq;
/a/DNA.DATA/est_drer1.seq;
/a/DDBJNEW.DATA/new_est_drer1.seq;
/a/DNA.DATA/est_dmel1.seq;
/a/DDBJNEW.DATA/new_est_dmel1.seq;
/a/DNA.DATA/est_ggal1.seq;
/a/DDBJNEW.DATA/new_est_ggal1.seq;
/a/DNA.DATA/est_gmax1.seq;
/a/DDBJNEW.DATA/new_est_gmax1.seq;
/a/DNA.DATA/est_hum1.seq;
/a/DNA.DATA/est_hum2.seq;
/a/DNA.DATA/est_hum3.seq;
/a/DNA.DATA/est_hum4.seq;
/a/DNA.DATA/est_hum5.seq;
/a/DNA.DATA/est_hum6.seq;
/a/DDBJNEW.DATA/new_est_hum1.seq;
/a/DNA.DATA/est_hvul1.seq;
/a/DDBJNEW.DATA/new_est_hvul1.seq;
/a/DNA.DATA/est_mous1.seq;
/a/DNA.DATA/est_mous2.seq;
/a/DNA.DATA/est_mous3.seq;
/a/DDBJNEW.DATA/new_est_mous1.seq;
/a/DNA.DATA/est_mtru1.seq;
/a/DDBJNEW.DATA/new_est_mtru1.seq;
/a/DNA.DATA/est_osat1.seq;
/a/DDBJNEW.DATA/new_est_osat1.seq;
/a/DNA.DATA/est_rnor1.seq;
/a/DDBJNEW.DATA/new_est_rnor1.seq;
/a/DNA.DATA/est_taes1.seq;
/a/DDBJNEW.DATA/new_est_taes1.seq;
/a/DNA.DATA/est_xlae1.seq;
/a/DDBJNEW.DATA/new_est_xlae1.seq;
/a/DNA.DATA/est_zmay1.seq;
/a/DDBJNEW.DATA/new_est_zmay1.seq;
/a/DNA.DATA/est_rest1.seq;
/a/DNA.DATA/est_rest10.seq;
/a/DNA.DATA/est_rest11.seq;
/a/DNA.DATA/est_rest2.seq;
/a/DNA.DATA/est_rest3.seq;
/a/DNA.DATA/est_rest4.seq;
/a/DNA.DATA/est_rest5.seq;
/a/DNA.DATA/est_rest6.seq;
/a/DNA.DATA/est_rest7.seq;
/a/DNA.DATA/est_rest8.seq;
/a/DNA.DATA/est_rest9.seq;
/a/DDBJNEW.DATA/new_est_rest1.seq;
/a/DDBJNEW.DATA/new_est_rest2.seq
71,642,774 sequences; 76,246,186,917 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AY232271|AY232271.1 Dictyostelium discoideum putative protei... 1207 0.0 1
AY232268|AY232268.1 Dictyostelium discoideum putative protei... 54 0.010 1
EJ669762|EJ669762.1 1092955054168 Global-Ocean-Sampling_GS-3... 38 0.033 2
EJ670893|EJ670893.1 1092955057048 Global-Ocean-Sampling_GS-3... 38 0.033 2
EK096404|EK096404.1 1092962039889 Global-Ocean-Sampling_GS-3... 38 0.033 2
CQ605966|CQ605966.1 Sequence 33724 from Patent WO0171042. 48 0.64 1
AC017833|AC017833.1 Drosophila melanogaster, *** SEQUENCING ... 48 0.64 1
AC006497|AC006497.5 Drosophila melanogaster strain y; cn bw ... 48 0.64 1
BH166980|BH166980.1 ENTSZ33TF Entamoeba histolytica Sheared ... 48 0.64 1
BH166449|BH166449.1 ENTTS69TR Entamoeba histolytica Sheared ... 48 0.64 1
AZ689062|AZ689062.1 ENTJR81TF Entamoeba histolytica Sheared ... 48 0.64 1
AZ688068|AZ688068.1 ENTIU51TF Entamoeba histolytica Sheared ... 48 0.64 1
AZ674241|AZ674241.1 ENTHG27TFB Entamoeba histolytica Sheared... 48 0.64 1
CL128259|CL128259.1 ISB1-94B24_Sp6.1 ISB1 Xenopus tropicalis... 48 0.64 1
AE014296|AE014296.4 Drosophila melanogaster chromosome 3L, c... 48 0.64 1
AC009377|AC009377.7 Drosophila melanogaster 3L BAC RP98-26P2... 48 0.64 1
AC009367|AC009367.9 Drosophila melanogaster 3L BAC RP98-48B1... 48 0.64 1
AC006280|AC006280.8 Plasmodium falciparum chromosome 12 clon... 36 0.66 8
AY232270|AY232270.1 Dictyostelium discoideum putative protei... 46 1.1 3
AC203538|AC203538.1 Glycine max clone gmp1-127b9, WORKING DR... 42 1.2 5
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma... 38 1.3 9
AC132129|AC132129.1 Mus musculus chromosome UNK clone RP23-2... 42 1.7 7
DV994362|DV994362.1 GQ02781.B3_E03 GQ099: Mixed spruce tissu... 46 2.5 1
DR592848|DR592848.1 WS00836.B21.1_E09 WS-X-N-A-9 Picea glauc... 46 2.5 1
DR475683|DR475683.1 WS00965.C21_F09 IS-B-N-A-10 Picea engelm... 46 2.5 1
DR473847|DR473847.1 WS00960.B21_C21 IS-B-N-A-10 Picea engelm... 46 2.5 1
CT578985|CT578985.1 Pinus pinaster bud EST. 46 2.5 1
CO254523|CO254523.1 WS00822.B21_I15 WS-X-N-A-9 Picea glauca ... 46 2.5 1
CO254397|CO254397.1 WS00822.B21_C23 WS-X-N-A-9 Picea glauca ... 46 2.5 1
CO252882|CO252882.1 WS00817.B21_P18 WS-X-N-A-9 Picea glauca ... 46 2.5 1
CK443179|CK443179.1 GQ0014b.BR_C07 GQ001: Male strobili deve... 46 2.5 1
CK435060|CK435060.1 GQ0063.TB_K12 GQ006: Cambium and phloem ... 46 2.5 1
BF324337|BF324337.1 su23h03.y1 Gm-c1068 Glycine max cDNA clo... 46 2.5 1
AC170172|AC170172.1 Mus musculus chromosome 1 clone wi1-1329... 46 2.5 1
ER531539|ER531539.1 1093015759570 Global-Ocean-Sampling_GS-3... 46 2.5 1
EI356503|EI356503.1 GM_WBc0107O18.f GM_WBc Glycine max genom... 46 2.5 1
DX011072|DX011072.1 KBrB001I17F KBrB, Brassica rapa BamHI BA... 46 2.5 1
AC153605|AC153605.2 Mus musculus 6 BAC RP23-346H23 (Roswell ... 46 2.5 1
BH165901|BH165901.1 ENTQW06TR Entamoeba histolytica Sheared ... 42 3.1 2
AC123017|AC123017.4 Rattus norvegicus clone CH230-282D11, **... 38 4.2 3
ED803985|ED803985.1 MG__Bb0064F23f MG__Bb Mimulus guttatus g... 40 4.4 2
AC109126|AC109126.4 Rattus norvegicus clone CH230-223P17, **... 34 4.6 2
AC107572|AC107572.4 Rattus norvegicus clone CH230-64C23, WOR... 34 4.6 2
D89861|D89861.1 Cyanidioschyzon merolae mitochondrial DNA, c... 34 5.2 2
BZ232652|BZ232652.1 CH230-281E4.TV CHORI-230 Segment 2 Rattu... 34 6.4 2
AL592149|AL592149.8 Mouse DNA sequence from clone RP23-283N1... 42 7.2 2
ED341242|ED341242.1 AUAC-aaw77a08.g1 Ascaris suum whole geno... 36 10.0 2
>AY232271|AY232271.1 Dictyostelium discoideum putative protein Roco9
(roco9) gene, complete cds.
Length = 10593
Score = 1207 bits (609), Expect = 0.0
Identities = 609/609 (100%)
Strand = Plus / Plus
Query: 594 caattaagaattaaaattgccaaaggtatcgcagcatctttacaaacgcttcatgatagt 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9718 caattaagaattaaaattgccaaaggtatcgcagcatctttacaaacgcttcatgatagt 9777
Query: 654 agaccatcagtggttcatcgtgatttaaagagtccaaatatcctactctcaagtaaagat 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9778 agaccatcagtggttcatcgtgatttaaagagtccaaatatcctactctcaagtaaagat 9837
Query: 714 tcattaactatggaatgccatctttgtgatttctcattatcaggcttctcaaccaccgtt 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9838 tcattaactatggaatgccatctttgtgatttctcattatcaggcttctcaaccaccgtt 9897
Query: 774 gcaaatcgttcggttcaaaatccagtttggttagctccagaggtaataaacaatgaatta 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9898 gcaaatcgttcggttcaaaatccagtttggttagctccagaggtaataaacaatgaatta 9957
Query: 834 tgttcggataaaagtgatgtctatgcatatggtgtaatcctatttgaacttttatcacgt 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9958 tgttcggataaaagtgatgtctatgcatatggtgtaatcctatttgaacttttatcacgt 10017
Query: 894 acaagattcttttcaaatattacctttatgtctgaagttgaaggtttaattaccgagggt 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10018 acaagattcttttcaaatattacctttatgtctgaagttgaaggtttaattaccgagggt 10077
Query: 954 gtacgtccatcactaccatctcataatttaccagagtatgatagccttttaaatatctgt 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10078 gtacgtccatcactaccatctcataatttaccagagtatgatagccttttaaatatctgt 10137
Query: 1014 tgggctcaagatccaacttgtcgtccttcctttattgaaattacaaagaaattagaagaa 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10138 tgggctcaagatccaacttgtcgtccttcctttattgaaattacaaagaaattagaagaa 10197
Query: 1074 attgaactaatcttaaaaactcatactccagttgaaccagtttacacagaaacttcaaag 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10198 attgaactaatcttaaaaactcatactccagttgaaccagtttacacagaaacttcaaag 10257
Query: 1134 aatcaacatattcaattaaatagaggaaatactatatatacccttgttaaaagaccaata 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10258 aatcaacatattcaattaaatagaggaaatactatatatacccttgttaaaagaccaata 10317
Query: 1194 acaccaatt 1202
|||||||||
Sbjct: 10318 acaccaatt 10326
Score = 765 bits (386), Expect(3) = 0.0
Identities = 386/386 (100%)
Strand = Plus / Plus
Query: 99 tagtataaatttaaatagattatcaattagtggtagtccatcattaagatcaatttcaat 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8508 tagtataaatttaaatagattatcaattagtggtagtccatcattaagatcaatttcaat 8567
Query: 159 tcgtaatggtggtaatattaatacattaaattcaagtggatcaaataattcaagtccatt 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8568 tcgtaatggtggtaatattaatacattaaattcaagtggatcaaataattcaagtccatt 8627
Query: 219 aaaattcccaaatttagcattatcaccaattcgtaatggtagtaattcaaatttaactca 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8628 aaaattcccaaatttagcattatcaccaattcgtaatggtagtaattcaaatttaactca 8687
Query: 279 tcatcatggtagtaattcaagtttaaataatttattatcaccattaaagaatttacaatt 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8688 tcatcatggtagtaattcaagtttaaataatttattatcaccattaaagaatttacaatt 8747
Query: 339 acaacaaaagtatgataaattgaaactattaaatgaaaaagtgattttcttaccaaatga 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8748 acaacaaaagtatgataaattgaaactattaaatgaaaaagtgattttcttaccaaatga 8807
Query: 399 attaccgaatgaaccaccaatgtcaatggataagatgtttttagatgttggtgaaccaag 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8808 attaccgaatgaaccaccaatgtcaatggataagatgtttttagatgttggtgaaccaag 8867
Query: 459 atctctttgtagaatattccaatttg 484
||||||||||||||||||||||||||
Sbjct: 8868 atctctttgtagaatattccaatttg 8893
Score = 178 bits (90), Expect(3) = 0.0
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 492 gataccatcaagtttcttcccaagattattgagtcaattgtatatgttttgttcaattaa 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8901 gataccatcaagtttcttcccaagattattgagtcaattgtatatgttttgttcaattaa 8960
Query: 552 acattgttggaagaatggagttatcttgga 581
||||||||||||||||||||||||||||||
Sbjct: 8961 acattgttggaagaatggagttatcttgga 8990
Score = 42.1 bits (21), Expect(3) = 0.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tatccatcaccaatttctaat 21
|||||||||||||||||||||
Sbjct: 8410 tatccatcaccaatttctaat 8430
Score = 34.2 bits (17), Expect(5) = 0.032
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 284 atggtagtaattcaagtttaa 304
||||||||||||||| |||||
Sbjct: 8663 atggtagtaattcaaatttaa 8683
Score = 32.2 bits (16), Expect(5) = 0.032
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 162 taatggtggtaatattaata 181
||||||| ||||||||||||
Sbjct: 7563 taatggtagtaatattaata 7582
Score = 32.2 bits (16), Expect(5) = 0.032
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 245 caattcgtaatggtagtaat 264
|||||||||||||| |||||
Sbjct: 8564 caattcgtaatggtggtaat 8583
Score = 28.2 bits (14), Expect(5) = 0.032
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 4 ccatcaccaatttc 17
||||||||||||||
Sbjct: 4747 ccatcaccaatttc 4760
Score = 26.3 bits (13), Expect(5) = 0.032
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 333 acaattacaacaa 345
|||||||||||||
Sbjct: 10383 acaattacaacaa 10395
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 71642774
Number of Hits to DB: 1,055,611,901
Number of extensions: 60701655
Number of successful extensions: 4963539
Number of sequences better than 10.0: 47
Length of query: 1301
Length of database: 76,246,186,917
Length adjustment: 24
Effective length of query: 1277
Effective length of database: 74,526,760,341
Effective search space: 95170672955457
Effective search space used: 95170672955457
X1: 11 (21.8 bits)
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
------=_Part_0_8984226.1184341743921--
Dictyostelium discoideum cDNA Project Home