Dictyostelium discoideum cDNA Clone VHE283

Sequence VHE283

GTTATGCAAA GATTTTCAAA AAGAATCCAG TCGTACCATT GTATGGTGAT
ATGCAAATCA CATTGGAATC ATTGGTTAAG AGATCACCAC ATTTCGATGA
GAAGGCATGG GGTACCTCAA CATTGGATAG TAAATCAGCG TTGGATTACG
AGATCATTCA TGTTTTGGAC CAAACACGTT CCCTCTACAA CGAGTATATG
GCACGTTTTG CAAATATGGT CAACGAGATT AGAGCGGCCA AAGCTCGTGG
TCCAAAGGAA CCATTGCCAT TGGCAGAGTC TGATATTCAA GCAATCACAT
TGATGGGTTT GAGGATTCTC TCTGATTGGA CCTCAAGAGT ACTTCAACAA
TCGGCTTGGA AATATTCTAA ACCAAACAAT GATCCAACCA TTTCAGCAAC
CTTTGATTAT GAACGTGTCG TTAAATTCAA TTATACCAAA GAGGAGAGAA
CCGCTTTGGT TCAATTGATC GCCATGATCA AATCATTGGC TTCATTGATG
ATGAAGAGTG AAACATTACT TCAACCAATA CTTCGTAAGA CCATTCATCA
AGAGTTGCAA GAGTTTGTTC AAATCAATCT CAAAGAGACC ATTAAATCCT
TTGTAAAGAA T--------- -GAGTGTCCT CCAACGTTTC TCTTCAATCN
TTAATATTGT TCGTCATGAT TGGTCTGGTG CTCCTCCAGA TAATGGTGTC
ATTTGCGTTG ATTCCTCAAC AGAGTTTTAT CGTTTATGGA GTGCCCTTCA
ATTTGTAATC TGTTGGCCAC TCTCAAATGA AAATGATAAA TCTTTCCATG
AATTGTTTGG TGATGGTTTA ATGTGGGCCG GTTGTTCATT GATCCATTTC
CTTGGTCAAC AATATCGTTT CGAATTATTT GATTTCTGTT ATCACATTTT
AAATGTAGAA GAGGCTGCTG CTGTTCGTTC AGATAAACCT GCCTTAAAGA
ATTTCTTTAA GAATGCTCAA ATCATCAAAG ATATCAATAA TCAAATCTTT
AGTATACTCA ATACATATTG TCCACCACCA CCACCTTCTA ATATGATCCT
TTCACCACCT GCTACTGAAC AAGCTGAACA ATTTATAGTT ACAACCACTG
TTGAAGAACA ATCAATTCAA CAACAACAAC AACAACAACA ACAACAACAA
CTTCAACAAT CAACTTCAAA TTCTGGAAGT AGTTTATCAC TTTCTGCTGC
TGGTGCACCA CCTCCACCAC CACCACCATC AACAAATGGT TTACCACCTC
CACCACCAAG GCTGAATAGA AAGAGTTCAA GTATTGAGAT TATGCTCCAC
CCCCACCACC ATTGGAATGC CACCACCCCC ACCA

Translated Amino Acid Sequence VHE283

YAKIFKKNPVVPLYGDMQITLESLVKRSPHFDEKAWGTSTLDSKSALDYEIIHVLDQTRS
LYNEYMARFANMVNEIRAAKARGPKEPLPLAESDIQAITLMGLRILSDWTSRVLQQSAWK
YSKPNNDPTISATFDYERVVKFNYTKEERTALVQLIAMIKSLASLMMKSETLLQPILRKT
IHQELQEFVQINLKETIKSFVKN---

---SVLQRFSSIXNIVRHDWSGAPPDNGVICVDSSTEFYRLWSALQFVICWPLSNENDKS
FHELFGDGLMWAGCSLIHFLGQQYRFELFDFCYHILNVEEAAAVRSDKPALKNFFKNAQI
IKDINNQIFSILNTYCPPPPPSNMILSPPATEQAEQFIVTTTVEEQSIQQQQQQQQQQQL
QQSTSNSGSSLSLSAAGAPPPPPPPSTNGLPPPPPRLNRKSSSIEIMLHPHHHWNATTPT

Homology VHE283 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHE283 (VHE283Q) /CSM/VH/VHE2-D/VHE283Q.Seq.d/                       2149   0.0
VHP502 (VHP502Q) /CSM/VH/VHP5-A/VHP502Q.Seq.d/                       1211   0.0
VHG686 (VHG686Q) /CSM/VH/VHG6-D/VHG686Q.Seq.d/                       1154   0.0
SHI756 (SHI756Q) /CSM/SH/SHI7-C/SHI756Q.Seq.d/                       1098   0.0
SHI590 (SHI590Q) /CSM/SH/SHI5-D/SHI590Q.Seq.d/                       1072   0.0
AFH509 (AFH509Q) /CSM/AF/AFH5-A/AFH509Q.Seq.d/                        977   0.0
VHJ827 (VHJ827Q) /CSM/VH/VHJ8-B/VHJ827Q.Seq.d/                        965   0.0
AHK356 (AHK356Q) /CSM/AH/AHK3-C/AHK356Q.Seq.d/                        946   0.0
AHJ856 (AHJ856Q) /CSM/AH/AHJ8-C/AHJ856Q.Seq.d/                        940   0.0
AFB604 (AFB604Q) /CSM/AF/AFB6-A/AFB604Q.Seq.d/                        940   0.0

Homology VHE283 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AY368270|AY368270.1 Dictyostelium discoideum Rac-binding com...  1203   0.0    1
EK381364|EK381364.1 1095469462626 Global-Ocean-Sampling_GS-3...    52   0.042  1
BI512543|BI512543.1 BB160009B10C07.5 Bee Brain Normalized Li...    48   0.66   1
AC169550|AC169550.2 Bos taurus clone CH240-223N3, *** SEQUEN...    48   0.66   1
AP006347|AP006347.1 Lotus japonicus genomic DNA, chromosome ...    48   0.66   1
CS459555|CS459555.1 Sequence 36 from Patent WO2006117596.          46   2.6    1
AX653967|AX653967.1 Sequence 3837 from Patent WO03000898.          46   2.6    1
AC161843|AC161843.2 Bos taurus clone CH240-101D9, *** SEQUEN...    46   2.6    1
AC066603|AC066603.3 Homo sapiens chromosome 3 clone RP11-690...    46   2.6    1
AC173386|AC173386.2 Bos taurus clone CH240-526J11, WORKING D...    46   2.6    1

Homology VHE283 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q6UK63) RecName: Full=Protein pirA;  &AY368270_1(AY368270|pid:n...   399   e-109
AY122203_1(AY122203|pid:none) Drosophila melanogaster LD47929 fu...   139   3e-31
(Q299G2) RecName: Full=Cytoplasmic FMR1-interacting protein; Alt...   139   3e-31
BT011115_1(BT011115|pid:none) Drosophila melanogaster LD19991 fu...   139   3e-31
(Q9VF87) RecName: Full=Cytoplasmic FMR1-interacting protein; Alt...   139   3e-31
(Q7L576) RecName: Full=Cytoplasmic FMR1-interacting protein 1; A...   119   5e-25
T32647(T32647)hypothetical protein F56A11.1 - Caenorhabditis ele...   119   5e-25
D38549_1(D38549|pid:none) Homo sapiens KIAA0068 mRNA, partial cds.    119   5e-25
AY687629_1(AY687629|pid:none) Aplysia californica cytoplasmic fr...   118   6e-25
AK146613_1(AK146613|pid:none) Mus musculus 17 days pregnant adul...   118   8e-25

Homology VHE283 vs Genome