Dictyostelium discoideum cDNA Clone VHE244

Sequence VHE244

GTTGGCAAAG TGCTGATTTA CTTTGTGGAG CATGGTTAAA GGCCAGATTT
AACTATCTGT CAGCTAACAA TGTAACATTT GATGAATCTT TTTAATTGGT
AATAAAAGTG ACGGGATCTA ATCCTGTAAT TTTGTGACCT CTTCAAAGGG
AAACATTAAC CAAACAATCA AAACAAAAAA TAAGTTTTGT AATTAATATG
TAATAGTGAT TAATATCATG ATACGTGTTA TCTACATGCT TAACTGGTTG
ATCCTGCCAG TAGTCATATG CTTGTCTCAA AGATTAAGCC ATGCATGTCT
AAGTATAAAT TCTTGTACGA TGAAACTGCA GACGGCTCAT TACAACAGTG
ATAAACTAAT AGACTTTCGG GTTTTACCTT TTGGATAACC GCAGTAAATC
GGGGCTAATA CATACAAGCG ATGGGTGACT GGCAACGGAA GCTCAGCGAT
TATTAGCATT CTACCAATGC CTTCGGGTTT TGGGTGATAC CGAATAATAT
TGCAGATCGA GGATTTATCT TCGACAAGTC TACTGTGTCA CTGCCCTATC
AACTTTCGAT GGTACGGTAT TGGCCTACCA TGGTTGTAAC GGGTA-----
-----CTTAG TTGGTGGAGC GATTTGTCTG GTCAATTCCG ATAACGGACG
AGACCTCGAC CTGCTAACTA GTAGTATTTA TTAGTCGATA TAGACGATAG
CTTTTCTGGG GTTTGGAATG ATTTCGGTCA TCTCCTGCTT CAAGGAGTGT
GTAGTCTGAC TCGATAGGTA CGAATTAAAA CTTCTTAGAG GGACTACCTG
CCTCAAGCAG GCGGAAGTCC GAGGCAATAA CAGGTCTGTG ATGCCCTTAG
ATACCTTGGG CCGCACGCGC GCTACAATGT AGGAAACAAA AAGGCTCCTG
GTCCGGAAGG ATTGGGTAAT CATTTGAATT TCCTACGTAA CTGGGCTTGA
TCTTTGTAAT TATTGATCAT AAACGAGGAA TTCCTTGTAA GCGTAAGTCA
TTACCTTATG CTGAATATGT CCCTGCCCTT TGTACACACC GCCCGTCGCT
CCTACCGATC GAATGATACG GTAAAGTTAA CGGATCGTTT TATCTGTGGC
AACACTGATA TAAATTAAAA GTTATTTAAA TCTCATTGTT TAGAGGAAGG
AGAAGTCGTA ACAAGGTATC CGTAGGTGAA CCTGCGGATG GATCATTTTT
TATCTTAATA TCATAAACTT TATGTTTTTT TGGATAATGG AACTGCTTGC
GTATAAAGAA ATTAGGCTTT TTAATTAAGG TTTAAGNAGT AAGTGGNCTG
TCAGATTTA

Translated Amino Acid Sequence VHE244

vgkvliyfvehg*rpdlticqltm*hlmnlfnw**k*rdlil*fcdlfkgkh*pnnqnkk
*vl*licnsd*yhdtcylha*lvdpasshmlvskikpcmskykflydetadgslqq**tn
rlsgftfwitavnrg*yiqamgdwqrklsdy*HSTNAFGFWVIPNNIADRGFIFDKSTVS
LPYQLSMVRYWPTMVVTG---

---LVGGAICLVNSDNGRDLDLLTSSIY*si*tiaflgfgmisviscfkecvv*ldryel
kllrgttclkqaevrgnnrsvmpldtlgrtratm*etkrllvrkdwvii*isyvtgldlc
ny*s*trnsl*a*vitlc*icpcplytppvaptdrmir*s*rivlsvatli*iksylnli
v*rkeks*qgirr*tcgwiifylniinfmffwimellaykeirlfn*glxskwxvrf

Homology VHE244 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHE244 (VHE244Q) /CSM/VH/VHE2-B/VHE244Q.Seq.d/                       2482   0.0
AHO642 (AHO642Q) /CSM/AH/AHO6-B/AHO642Q.Seq.d/                       1340   0.0
VHK855 (VHK855Q) /CSM/VH/VHK8-C/VHK855Q.Seq.d/                       1326   0.0
VHK334 (VHK334Q) /CSM/VH/VHK3-B/VHK334Q.Seq.d/                       1326   0.0
VFM557 (VFM557Q) /CSM/VF/VFM5-C/VFM557Q.Seq.d/                       1326   0.0
AHL576 (AHL576Q) /CSM/AH/AHL5-D/AHL576Q.Seq.d/                       1322   0.0
VHJ647 (VHJ647Q) /CSM/VH/VHJ6-B/VHJ647Q.Seq.d/                       1314   0.0
VFD795 (VFD795Q) /CSM/VF/VFD7-D/VFD795Q.Seq.d/                       1312   0.0
AHK528 (AHK528Q) /CSM/AH/AHK5-B/AHK528Q.Seq.d/                       1312   0.0
FC-AG24 (FC-AG24Q) /CSM/FC/FC-AG/FC-AG24Q.Seq.d/                     1310   0.0

Homology VHE244 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AY171066|AY171066.1 Dictyostelium discoideum extrachromosoma...  1227   0.0    2
X00134|X00134.1 Dictyostelium discoideum 17S rRNA sequence.      1178   0.0    1
K02641|K02641.1 Slime mold (D.discoideum) 17S small subunit ...  1178   0.0    1
DQ340385|DQ340385.1 Dictyostelium citrinum 17S ribosomal RNA...  1164   0.0    2
AM168071|AM168071.1 Dictyostelium discoideum 18S rRNA gene, ...  1154   0.0    1
AM168038|AM168038.1 Dictyostelium dimigraformum 18S rRNA gen...  1146   0.0    1
AM168039|AM168039.1 Dictyostelium discoideum 18S rRNA gene, ...  1130   0.0    1
AM168040|AM168040.1 Dictyostelium discoideum 18S rRNA gene, ...  1116   0.0    1
AM168033|AM168033.1 Dictyostelium citrinum 18S rRNA gene, is...  1114   0.0    1
X00601|X00601.1 Dictyostelium discoideum ribosomal RNA gene.      979   0.0    2

Homology VHE244 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF421549_1(AF421549|pid:none) Gallus gallus CDH1-D mRNA, partial...    77   2e-12
AM462492_6(AM462492|pid:none) Vitis vinifera contig VV78X177628....    60   2e-07
CP003008_93(CP003008|pid:none) Myceliophthora thermophila ATCC 4...    47   1e-05
AY914930_1(AY914930|pid:none) Schistosoma japonicum SJCHGC01014 ...    53   4e-05
EU955514_1(EU955514|pid:none) Zea mays clone 1535262 hypothetica...    50   2e-04
AL844509_687(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    50   4e-04
FP929128_285(FP929128|pid:none) Leptosphaeria maculans JN3 lm_Su...    49   6e-04
FQ311869_2(FQ311869|pid:none) Azospirillum lipoferum 4B plasmid ...    42   0.060
AM085146_9(AM085146|pid:none) Magnetospirillum gryphiswaldense m...    42   0.078
FN543107_181(FN543107|pid:none) Curvibacter putative symbiont of...    39   0.51

Homology VHE244 vs Genome