Homology VHD627 vs Protein

Query= VHD627 (VHD627Q) /CSM/VH/VHD6-B/VHD627Q.Seq.d/
         (1271 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q86AH2) RecName: Full=FNIP repeat-containing protein DDB_G02719...   355   4e-96
AC117075_45(AC117075|pid:none) Dictyostelium discoideum chromoso...    53   3e-05
AC117267_6(AC117267|pid:none) Dictyostelium discoideum chromosom...    45   0.009
AC116305_136(AC116305|pid:none) Dictyostelium discoideum chromos...    43   0.034
(Q552Z2) RecName: Full=Probable serine/threonine-protein kinase ...    42   0.057
AC114265_1(AC114265|pid:none) Dictyostelium discoideum chromosom...    39   0.49
JN258408_1042(JN258408|pid:none) Megavirus chiliensis, complete ...    39   0.63
JN258408_118(JN258408|pid:none) Megavirus chiliensis, complete g...    39   0.63
AC115604_12(AC115604|pid:none) Dictyostelium discoideum chromoso...    38   1.1
HB807279_1(HB807279|pid:none) Sequence 156493 from Patent EP2090...    37   1.8
AC116957_4(AC116957|pid:none) Dictyostelium discoideum chromosom...    37   1.8
AP005633_7(AP005633|pid:none) Oryza sativa Japonica Group genomi...    37   1.8
JN258408_100(JN258408|pid:none) Megavirus chiliensis, complete g...    37   2.4
AC006300_12(AC006300|pid:none) Arabidopsis thaliana chromosome 2...    37   3.1
(Q54JC0) RecName: Full=Calmodulin-binding protein CmbB; AltName:...    37   3.1
JN258408_224(JN258408|pid:none) Megavirus chiliensis, complete g...    37   3.1
AB520050_1(AB520050|pid:none) Eptatretus burgeri VLRB gene for v...    37   3.1
(Q869L4) RecName: Full=Probable serine/threonine-protein kinase ...    36   4.1
AC116957_13(AC116957|pid:none) Dictyostelium discoideum chromoso...    36   5.4
AC117176_63(AC117176|pid:none) Dictyostelium discoideum chromoso...    36   5.4
CP000817_3267(CP000817|pid:none) Lysinibacillus sphaericus C3-41...    35   7.0
(Q54FS1) RecName: Full=FNIP repeat-containing protein DDB_G02906...    35   9.2
FJ817291_38(FJ817291|pid:none) Phaseolus vulgaris clone BAC B4-4...    35   9.2
DQ873591_1(DQ873591|pid:none) Branchiostoma belcheri tsingtaunes...    35   9.2
AC006300_9(AC006300|pid:none) Arabidopsis thaliana chromosome 2 ...    35   9.2

>(Q86AH2) RecName: Full=FNIP repeat-containing protein DDB_G0271996;
            &AC115599_27(AC115599|pid:none)
          Length = 937

 Score =  355 bits (910), Expect = 4e-96
 Identities = 177/184 (96%), Positives = 177/184 (96%)
 Frame = +3

Query: 603  DDSTIGAILNXXXXXXXRETFPRSVESLHLNIVNVLDKEINIPSNVTKLIITGNNLQHDG 782
            DDSTIGAILN       RETFPRSVESLHLNIVNVLDKEINIPSNVTKLIITGNNLQHDG
Sbjct: 494  DDSTIGAILNSFSSSSSRETFPRSVESLHLNIVNVLDKEINIPSNVTKLIITGNNLQHDG 553

Query: 783  PDVFMVGKKGSKITHLKLRGYEKPICQEMFKNLVNLKSIQFIGAYNHQLGPNCFPPQSIT 962
            PDVFMVGKKGSKITHLKLRGYEKPICQEMFKNLVNLKSIQFIGAYNHQLGPNCFPPQSIT
Sbjct: 554  PDVFMVGKKGSKITHLKLRGYEKPICQEMFKNLVNLKSIQFIGAYNHQLGPNCFPPQSIT 613

Query: 963  NLEFDCLPSVIPIGSLPSTLKSLRVKSFCTPFLKNSLPSSLLILECAFVRSFIDSYEIVD 1142
            NLEFDCLPSVIPIGSLPSTLKSLRVKSFCTPFLKNSLPSSLLILECAFVRSFIDSYEIVD
Sbjct: 614  NLEFDCLPSVIPIGSLPSTLKSLRVKSFCTPFLKNSLPSSLLILECAFVRSFIDSYEIVD 673

Query: 1143 EIFV 1154
            EIFV
Sbjct: 674  EIFV 677

 Score =  193 bits (490), Expect = 2e-47
 Identities = 129/297 (43%), Positives = 160/297 (53%), Gaps = 43/297 (14%)
 Frame = +3

Query: 336  DIDRGGEKKANKLIAKTTKKFNKDMTAYTSGKFFELWRNQVVRDKILGYVRIHNLHYDKR 515
            DIDRGGEKKANKLIAKTTKKFNKDMTAYTSGKFFELWRNQVVRDKILGYVRIHNLHYDKR
Sbjct: 77   DIDRGGEKKANKLIAKTTKKFNKDMTAYTSGKFFELWRNQVVRDKILGYVRIHNLHYDKR 136

Query: 516  VFKCIDLNNCIDNGADLQQQHNCHRXXXXDDSTIG----AILNXXXXXXXRETFPRSVES 683
            VFKCIDLNNCIDNGADLQQQHNCHR        +G      ++          +   + S
Sbjct: 137  VFKCIDLNNCIDNGADLQQQHNCHRVHNHYHQDLGHNYFGKVSRGIVSLSDYKYYGYLRS 196

Query: 684  LHLNIVNVLDKEI-----NIPSNVTKLIITGNNLQHDGPDVFMVGKKGSKITHLKLRGYE 848
            +HL      ++E+     ++P  V+ L ++G    H    +F  G   + IT+L +
Sbjct: 197  VHLIGYEQHEEELIKTIKSLPVGVSTLELSG----HLNKIIFKEGSLPTSITNLTISSPT 252

Query: 849  KPICQEMFKNLVNLK--------------------------------SIQFIGAYNHQLG 932
            K   + +  +L  LK                                S+   G +N
Sbjct: 253  KLGYKSIPSHLKTLKLNSTFNDPLLVQGRLEGQLGIVPLLPIDGAITSLDTGGKFNQPFE 312

Query: 933  PNCFPPQSITNLEF-DCLPSVIPIGSLPSTLKSLRV-KSFCTPFLKNSLPSSLLILE 1097
                 P S+T L F +     I +GSLPS +KSL++ + FC P    SLP  L  L+
Sbjct: 313  AGLL-PSSLTELAFGNEYFRPIEVGSLPSGIKSLKLGQRFCLPIPIGSLPIGLTELQ 368

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,140,770,909
Number of extensions: 37543105
Number of successful extensions: 88034
Number of sequences better than 10.0: 25
Number of HSP's gapped: 87977
Number of HSP's successfully gapped: 29
Length of query: 423
Length of database: 1,732,582,204
Length adjustment: 135
Effective length of query: 288
Effective length of database: 1,010,438,449
Effective search space: 291006273312
Effective search space used: 291006273312
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)