Homology VHD627 vs DNA
Query= VHD627 (VHD627Q) /CSM/VH/VHD6-B/VHD627Q.Seq.d/
(1271 letters)
Database: /a/DNA.DATA/ddbjhum1.seq;
/a/DNA.DATA/ddbjhum2.seq;
/a/DNA.DATA/ddbjhum3.seq;
/a/DNA.DATA/ddbjhum4.seq;
/a/DNA.DATA/ddbjhum5.seq;
/a/DDBJNEW.DATA/new_ddbjhum.seq;
/a/DNA.DATA/ddbjpri.seq;
/a/DDBJNEW.DATA/new_ddbjpri.seq;
/a/DNA.DATA/ddbjrod1.seq;
/a/DNA.DATA/ddbjrod2.seq;
/a/DNA.DATA/ddbjrod3.seq;
/a/DNA.DATA/ddbjrod4.seq;
/a/DNA.DATA/ddbjrod5.seq;
/a/DDBJNEW.DATA/new_ddbjrod.seq;
/a/DNA.DATA/ddbjmam.seq;
/a/DDBJNEW.DATA/new_ddbjmam.seq;
/a/DNA.DATA/ddbjvrt1.seq;
/a/DNA.DATA/ddbjvrt2.seq;
/a/DNA.DATA/ddbjvrt3.seq;
/a/DDBJNEW.DATA/new_ddbjvrt.seq;
/a/DNA.DATA/ddbjinv1.seq;
/a/DNA.DATA/ddbjinv2.seq;
/a/DDBJNEW.DATA/new_ddbjinv.seq;
/a/DNA.DATA/ddbjpln1.seq;
/a/DNA.DATA/ddbjpln2.seq;
/a/DNA.DATA/ddbjpln3.seq;
/a/DNA.DATA/ddbjpln4.seq;
/a/DDBJNEW.DATA/new_ddbjpln.seq;
/a/DNA.DATA/ddbjbct1.seq;
/a/DNA.DATA/ddbjbct2.seq;
/a/DNA.DATA/ddbjbct3.seq;
/a/DNA.DATA/ddbjbct4.seq;
/a/DDBJNEW.DATA/new_ddbjbct.seq;
/a/DNA.DATA/ddbjvrl1.seq;
/a/DNA.DATA/ddbjvrl2.seq;
/a/DDBJNEW.DATA/new_ddbjvrl.seq;
/a/DNA.DATA/ddbjphg.seq;
/a/DDBJNEW.DATA/new_ddbjphg.seq;
/a/DNA.DATA/ddbjuna.seq;
/a/DDBJNEW.DATA/new_ddbjuna.seq;
/a/DNA.DATA/ddbjgss1.seq;
/a/DNA.DATA/ddbjgss10.seq;
/a/DNA.DATA/ddbjgss11.seq;
/a/DNA.DATA/ddbjgss12.seq;
/a/DNA.DATA/ddbjgss13.seq;
/a/DNA.DATA/ddbjgss14.seq;
/a/DNA.DATA/ddbjgss15.seq;
/a/DNA.DATA/ddbjgss16.seq;
/a/DNA.DATA/ddbjgss17.seq;
/a/DNA.DATA/ddbjgss18.seq;
/a/DNA.DATA/ddbjgss19.seq;
/a/DNA.DATA/ddbjgss2.seq;
/a/DNA.DATA/ddbjgss20.seq;
/a/DNA.DATA/ddbjgss21.seq;
/a/DNA.DATA/ddbjgss22.seq;
/a/DNA.DATA/ddbjgss23.seq;
/a/DNA.DATA/ddbjgss24.seq;
/a/DNA.DATA/ddbjgss25.seq;
/a/DNA.DATA/ddbjgss26.seq;
/a/DNA.DATA/ddbjgss27.seq;
/a/DNA.DATA/ddbjgss28.seq;
/a/DNA.DATA/ddbjgss29.seq;
/a/DNA.DATA/ddbjgss3.seq;
/a/DNA.DATA/ddbjgss30.seq;
/a/DNA.DATA/ddbjgss31.seq;
/a/DNA.DATA/ddbjgss32.seq;
/a/DNA.DATA/ddbjgss33.seq;
/a/DNA.DATA/ddbjgss4.seq;
/a/DNA.DATA/ddbjgss5.seq;
/a/DNA.DATA/ddbjgss6.seq;
/a/DNA.DATA/ddbjgss7.seq;
/a/DNA.DATA/ddbjgss8.seq;
/a/DNA.DATA/ddbjgss9.seq;
/a/DDBJNEW.DATA/new_ddbjgss1.seq;
/a/DDBJNEW.DATA/new_ddbjgss10.seq;
/a/DDBJNEW.DATA/new_ddbjgss11.seq;
/a/DDBJNEW.DATA/new_ddbjgss12.seq;
/a/DDBJNEW.DATA/new_ddbjgss13.seq;
/a/DDBJNEW.DATA/new_ddbjgss14.seq;
/a/DDBJNEW.DATA/new_ddbjgss2.seq;
/a/DDBJNEW.DATA/new_ddbjgss3.seq;
/a/DDBJNEW.DATA/new_ddbjgss4.seq;
/a/DDBJNEW.DATA/new_ddbjgss5.seq;
/a/DDBJNEW.DATA/new_ddbjgss6.seq;
/a/DDBJNEW.DATA/new_ddbjgss7.seq;
/a/DDBJNEW.DATA/new_ddbjgss8.seq;
/a/DDBJNEW.DATA/new_ddbjgss9.seq;
/a/DNA.DATA/ddbjhtg1.seq;
/a/DNA.DATA/ddbjhtg10.seq;
/a/DNA.DATA/ddbjhtg11.seq;
/a/DNA.DATA/ddbjhtg12.seq;
/a/DNA.DATA/ddbjhtg13.seq;
/a/DNA.DATA/ddbjhtg14.seq;
/a/DNA.DATA/ddbjhtg15.seq;
/a/DNA.DATA/ddbjhtg16.seq;
/a/DNA.DATA/ddbjhtg2.seq;
/a/DNA.DATA/ddbjhtg3.seq;
/a/DNA.DATA/ddbjhtg4.seq;
/a/DNA.DATA/ddbjhtg5.seq;
/a/DNA.DATA/ddbjhtg6.seq;
/a/DNA.DATA/ddbjhtg7.seq;
/a/DNA.DATA/ddbjhtg8.seq;
/a/DNA.DATA/ddbjhtg9.seq;
/a/DDBJNEW.DATA/new_ddbjhtg1.seq;
/a/DDBJNEW.DATA/new_ddbjhtg2.seq;
/a/DDBJNEW.DATA/new_ddbjhtg3.seq;
/a/DNA.DATA/ddbjpat1.seq;
/a/DNA.DATA/ddbjpat2.seq;
/a/DNA.DATA/ddbjpat3.seq;
/a/DNA.DATA/ddbjpat4.seq;
/a/DNA.DATA/ddbjpat5.seq;
/a/DDBJNEW.DATA/new_ddbjpat.seq;
/a/DNA.DATA/ddbjsts1.seq;
/a/DNA.DATA/ddbjsts2.seq;
/a/DNA.DATA/ddbjsts3.seq;
/a/DDBJNEW.DATA/new_ddbjsts.seq;
/a/DNA.DATA/ddbjsyn.seq;
/a/DDBJNEW.DATA/new_ddbjsyn.seq;
/a/DNA.DATA/est_atha1.seq;
/a/DDBJNEW.DATA/new_est_atha1.seq;
/a/DNA.DATA/est_btra1.seq;
/a/DDBJNEW.DATA/new_est_btra1.seq;
/a/DNA.DATA/est_cele1.seq;
/a/DNA.DATA/est_crei1.seq;
/a/DDBJNEW.DATA/new_est_crei1.seq;
/a/DNA.DATA/est_cint1.seq;
/a/DNA.DATA/est_drer1.seq;
/a/DDBJNEW.DATA/new_est_drer1.seq;
/a/DNA.DATA/est_dmel1.seq;
/a/DDBJNEW.DATA/new_est_dmel1.seq;
/a/DNA.DATA/est_ggal1.seq;
/a/DDBJNEW.DATA/new_est_ggal1.seq;
/a/DNA.DATA/est_gmax1.seq;
/a/DDBJNEW.DATA/new_est_gmax1.seq;
/a/DNA.DATA/est_hum1.seq;
/a/DNA.DATA/est_hum2.seq;
/a/DNA.DATA/est_hum3.seq;
/a/DNA.DATA/est_hum4.seq;
/a/DNA.DATA/est_hum5.seq;
/a/DNA.DATA/est_hum6.seq;
/a/DDBJNEW.DATA/new_est_hum1.seq;
/a/DNA.DATA/est_hvul1.seq;
/a/DDBJNEW.DATA/new_est_hvul1.seq;
/a/DNA.DATA/est_mous1.seq;
/a/DNA.DATA/est_mous2.seq;
/a/DNA.DATA/est_mous3.seq;
/a/DDBJNEW.DATA/new_est_mous1.seq;
/a/DNA.DATA/est_mtru1.seq;
/a/DDBJNEW.DATA/new_est_mtru1.seq;
/a/DNA.DATA/est_osat1.seq;
/a/DDBJNEW.DATA/new_est_osat1.seq;
/a/DNA.DATA/est_rnor1.seq;
/a/DDBJNEW.DATA/new_est_rnor1.seq;
/a/DNA.DATA/est_taes1.seq;
/a/DDBJNEW.DATA/new_est_taes1.seq;
/a/DNA.DATA/est_xlae1.seq;
/a/DDBJNEW.DATA/new_est_xlae1.seq;
/a/DNA.DATA/est_zmay1.seq;
/a/DDBJNEW.DATA/new_est_zmay1.seq;
/a/DNA.DATA/est_rest1.seq;
/a/DNA.DATA/est_rest10.seq;
/a/DNA.DATA/est_rest11.seq;
/a/DNA.DATA/est_rest2.seq;
/a/DNA.DATA/est_rest3.seq;
/a/DNA.DATA/est_rest4.seq;
/a/DNA.DATA/est_rest5.seq;
/a/DNA.DATA/est_rest6.seq;
/a/DNA.DATA/est_rest7.seq;
/a/DNA.DATA/est_rest8.seq;
/a/DNA.DATA/est_rest9.seq;
/a/DDBJNEW.DATA/new_est_rest1.seq;
/a/DDBJNEW.DATA/new_est_rest2.seq
71,560,145 sequences; 75,944,757,152 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 ma... 1138 0.0 1
AM484068|AM484068.2 Vitis vinifera contig VV78X098699.5, who... 46 0.007 3
AC181677|AC181677.1 Strongylocentrotus purpuratus clone R3-1... 40 0.27 6
AC180191|AC180191.1 Strongylocentrotus purpuratus clone R3-3... 48 0.63 1
AC176043|AC176043.1 Strongylocentrotus purpuratus clone R3-1... 48 0.63 1
CT390695|CT390695.1 Sus scrofa genomic clone PigE-44F18, gen... 38 0.68 2
AL732603|AL732603.3 Mouse DNA sequence from clone RP23-154H8... 42 0.83 3
AL163227|AL163227.2 Homo sapiens chromosome 21 segment HS21C... 36 1.2 2
AC130119|AC130119.4 Rattus norvegicus clone CH230-26A13, WOR... 34 1.2 2
AP000475|AP000475.4 Homo sapiens genomic DNA, chromosome 21 ... 36 1.3 2
AF236874|AF236874.1 Homo sapiens chromosome 21 map 21q21, BA... 36 1.3 2
DH322903|DH322903.1 Oryzias latipes Fosmid clone:GOLWFno680_... 40 2.0 2
EL430660|EL430660.1 CHCS1116.b1_H16.ab1 CHC(LMS) Texas bluew... 40 2.2 2
AP001653|AP001653.2 Homo sapiens genomic DNA, chromosome 18q... 46 2.5 1
AP001448|AP001448.3 Homo sapiens genomic DNA, chromosome 18q... 46 2.5 1
AC090393|AC090393.9 Homo sapiens chromosome 18, clone RP11-7... 46 2.5 1
CT956078|CT956078.1 Pig DNA sequence *** SEQUENCING IN PROGR... 44 3.7 6
AC110162|AC110162.2 Mus musculus clone RP23-122J23, WORKING ... 42 4.1 3
AC116963|AC116963.2 Dictyostelium discoideum chromosome 2 ma... 36 4.4 10
AM432889|AM432889.1 Vitis vinifera contig VV78X145601.4, who... 38 6.8 2
AC155089|AC155089.2 Bos taurus clone CH240-34H6, *** SEQUENC... 40 7.2 5
DY921526|DY921526.1 CHAY4838.b1_K10.ab1 CHA(XYZ) common wild... 40 8.7 2
DT769495|DT769495.1 EST1203345 Aquilegia cDNA library Aquile... 36 9.5 2
DT748152|DT748152.1 EST1182001 Aquilegia cDNA library Aquile... 36 9.5 2
DY682138|DY682138.1 TTEAC91THC Tetrahymena thermophila EST l... 44 9.8 1
CX585214|CX585214.1 TTE00016939 Amplicon Express - Conjugati... 44 9.8 1
EC807765|EC807765.1 SAE00008317 ir_esapbrog Sphaeroforma arc... 44 9.8 1
EC806104|EC806104.1 SAE00007711 ir_esapbrog Sphaeroforma arc... 44 9.8 1
EC806031|EC806031.1 SAE00005215 ir_esapbrog Sphaeroforma arc... 44 9.8 1
EC804742|EC804742.1 SAE00003998 ir_esapbrog Sphaeroforma arc... 44 9.8 1
EC804299|EC804299.1 SAE00005480 ir_esapbrog Sphaeroforma arc... 44 9.8 1
EC803320|EC803320.1 SAE00009431 ir_esapbrog Sphaeroforma arc... 44 9.8 1
AV247729|AV247729.1 Mus musculus 0 day neonate head cDNA, RI... 44 9.8 1
BE315294|BE315294.1 601141816F1 NIH_MGC_9 Homo sapiens cDNA ... 44 9.8 1
AX145503|AX145503.1 Sequence 4225 from Patent WO0134809. 44 9.8 1
AX143925|AX143925.1 Sequence 2647 from Patent WO0134809. 44 9.8 1
AR486139|AR486139.1 Sequence 4225 from patent US 6703492. 44 9.8 1
AR484905|AR484905.1 Sequence 2647 from patent US 6703492. 44 9.8 1
AC186452|AC186452.2 Microcebus murinus clone CH257-58G14, WO... 44 9.8 1
AC174509|AC174509.2 Strongylocentrotus purpuratus clone R3-1... 44 9.8 1
AC172736|AC172736.1 Loxodonta africana clone VMRC15-222K22, ... 44 9.8 1
AC172708|AC172708.2 Aotus nancymaae clone CH258-358A2, WORKI... 44 9.8 1
AC164509|AC164509.2 Loxodonta africana clone VMRC15-3N8, WOR... 44 9.8 1
EK087874|EK087874.1 1092961175150 Global-Ocean-Sampling_GS-3... 44 9.8 1
EK059455|EK059455.1 1092960063280 Global-Ocean-Sampling_GS-3... 44 9.8 1
EJ959621|EJ959621.1 1093018995574 Global-Ocean-Sampling_GS-3... 44 9.8 1
EJ766378|EJ766378.1 1092963265312 Global-Ocean-Sampling_GS-3... 44 9.8 1
EJ764174|EJ764174.1 1092963173957 Global-Ocean-Sampling_GS-3... 44 9.8 1
EJ403441|EJ403441.1 1093012072070 Global-Ocean-Sampling_GS-2... 44 9.8 1
BH165845|BH165845.1 ENTQT05TF Entamoeba histolytica Sheared ... 44 9.8 1
BH159339|BH159339.1 ENTRZ17TF Entamoeba histolytica Sheared ... 44 9.8 1
AZ971459|AZ971459.1 2M0244P23R Mouse 10kb plasmid UUGC2M lib... 44 9.8 1
AZ502715|AZ502715.1 1M0342F09F Mouse 10kb plasmid UUGC1M lib... 44 9.8 1
DU955253|DU955253.1 226312 Tomato MboI BAC Library Solanum l... 44 9.8 1
BX990756|BX990756.1 Forward strand read from insert in 5'HPR... 44 9.8 1
CP000029|CP000029.1 Staphylococcus epidermidis RP62A, comple... 44 9.8 1
AF270185|AF270185.1 Staphylococcus epidermidis strain SR1 cl... 44 9.8 1
AE015929|AE015929.1 Staphylococcus epidermidis ATCC 12228, c... 44 9.8 1
AM484781|AM484781.1 Vitis vinifera, whole genome shotgun seq... 44 9.8 1
CR388008|CR388008.5 Zebrafish DNA sequence from clone CH211-... 44 9.8 1
AC153974|AC153974.9 Mus musculus 10 BAC RP24-462I5 (Roswell ... 44 9.8 1
AC153549|AC153549.5 Mus musculus 10 BAC RP23-222O23 (Roswell... 44 9.8 1
AC141879|AC141879.5 Mus musculus BAC clone RP24-249I4 from c... 44 9.8 1
AC110236|AC110236.8 Mus musculus chromosome 15, clone RP23-1... 44 9.8 1
AC108399|AC108399.11 Mus musculus chromosome 19, clone RP24-... 44 9.8 1
AC078809|AC078809.9 Homo sapiens 3 BAC RP11-600G3 (Roswell P... 44 9.8 1
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma... 34 9.9 15
>AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 map
4229098-4354721 strain AX4, complete sequence.
Length = 125623
Score = 1138 bits (574), Expect = 0.0
Identities = 574/574 (100%)
Strand = Plus / Minus
Query: 602 tgatgattccaccattggtgcaattttaaattcattctcatcttcaagtagtcgtgaaac 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63133 tgatgattccaccattggtgcaattttaaattcattctcatcttcaagtagtcgtgaaac 63074
Query: 662 attcccacgttctgttgaatcgttacatttaaacattgtaaatgtattggataaagaaat 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63073 attcccacgttctgttgaatcgttacatttaaacattgtaaatgtattggataaagaaat 63014
Query: 722 taacattccatccaatgttactaaattaattatcactggtaataatttacaacatgatgg 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63013 taacattccatccaatgttactaaattaattatcactggtaataatttacaacatgatgg 62954
Query: 782 tcctgacgttttcatggttggtaaaaagggctcaaaaatcactcatttaaaacttagagg 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62953 tcctgacgttttcatggttggtaaaaagggctcaaaaatcactcatttaaaacttagagg 62894
Query: 842 ttatgaaaaacctatttgtcaagaaatgtttaagaatttagttaacctaaaatcaattca 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62893 ttatgaaaaacctatttgtcaagaaatgtttaagaatttagttaacctaaaatcaattca 62834
Query: 902 attcattggtgcctacaatcatcaattaggaccaaactgtttcccaccacaatcaattac 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62833 attcattggtgcctacaatcatcaattaggaccaaactgtttcccaccacaatcaattac 62774
Query: 962 aaatctcgaatttgattgtttaccatcggtcatcccaattggttccttaccatcaacttt 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62773 aaatctcgaatttgattgtttaccatcggtcatcccaattggttccttaccatcaacttt 62714
Query: 1022 aaaatcattaagagttaaatcattttgtactccattcttaaaaaattcattaccatcttc 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62713 aaaatcattaagagttaaatcattttgtactccattcttaaaaaattcattaccatcttc 62654
Query: 1082 actcttaattttagaatgtgcttttgttcgttctttcattgactcttatgaaattgttga 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62653 actcttaattttagaatgtgcttttgttcgttctttcattgactcttatgaaattgttga 62594
Query: 1142 tgagatatttgttgaacaacaagctcaatacgct 1175
||||||||||||||||||||||||||||||||||
Sbjct: 62593 tgagatatttgttgaacaacaagctcaatacgct 62560
Score = 432 bits (218), Expect(5) = e-127
Identities = 218/218 (100%)
Strand = Plus / Minus
Query: 373 taattgcaaaaacaacaaagaaatttaataaagatatgacagcatatacaagtggtaaat 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64346 taattgcaaaaacaacaaagaaatttaataaagatatgacagcatatacaagtggtaaat 64287
Query: 433 tttttgaactttggagaaatcaagttgtacgtgataaaatattaggttatgttagaattc 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64286 tttttgaactttggagaaatcaagttgtacgtgataaaatattaggttatgttagaattc 64227
Query: 493 ataatttacattatgataagagagtttttaaatgtatagatttaaataattgtattgata 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64226 ataatttacattatgataagagagtttttaaatgtatagatttaaataattgtattgata 64167
Query: 553 acggtgcagatttacaacaacaacataattgtcataga 590
||||||||||||||||||||||||||||||||||||||
Sbjct: 64166 acggtgcagatttacaacaacaacataattgtcataga 64129
Score = 67.9 bits (34), Expect(5) = e-127
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 109 tgcaacaaccaatttcgattcaacaaccagtagt 142
||||||||||||||||||||||||||||||||||
Sbjct: 64610 tgcaacaaccaatttcgattcaacaaccagtagt 64577
Score = 34.2 bits (17), Expect(5) = e-127
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 791 tttcatggttggtaaaa 807
|||||||||||||||||
Sbjct: 8401 tttcatggttggtaaaa 8385
Score = 34.2 bits (17), Expect(5) = e-127
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 723 aacattccatccaatgt 739
|||||||||||||||||
Sbjct: 63261 aacattccatccaatgt 63245
Score = 26.3 bits (13), Expect(5) = e-127
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 974 tgattgtttacca 986
|||||||||||||
Sbjct: 2475 tgattgtttacca 2463
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 71560145
Number of Hits to DB: 871,501,330
Number of extensions: 53517676
Number of successful extensions: 4271812
Number of sequences better than 10.0: 68
Length of query: 1271
Length of database: 75,944,757,152
Length adjustment: 24
Effective length of query: 1247
Effective length of database: 74,227,313,672
Effective search space: 92561460148984
Effective search space used: 92561460148984
X1: 11 (21.8 bits)
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
------=_Part_0_8984226.1182583861635--
Dictyostelium discoideum cDNA Project Home