Dictyostelium discoideum cDNA Clone VHD610

Sequence VHD610

---------- TGGTAATTGT GATTTATCCG ACACCGTTTG CCAAGATGGT
AATGAATGTA CTACCAATGT TTGTGAATCA AGTGATAGTG TCCTTGGTGT
ATGTACAAAC TCAACAGTTG AATGCGGTGC TACCAACACT GATAAATGTA
TCCAATTCTC TTGTAATGAA GCCACCGGTT GCCAACAATC AGCTGTCGTT
TGTCCAGATG TTGGTAGTTG TTTAGTTGGT TATTGTGATA GTAAACAAGG
TTGTCTCACC AAACCAAGAT CTTGCGATAC TGGTGTTTTC TGTTTAACTG
GTGAATGTAT TGAAAATGCT GGTGGTTGTA TCGTCTATGA AAAACGTTGT
GATGCTGATA ATGGAAGATG TCAACAAGGT GTATGTGTAA ATAATACCGC
CACTGAAGAA GGTTATTGTA AATCTGAAGA CTATGATCCA TTACCATTCA
TTTGTAAAAC TGGTGCTGTC GTTTCAACTG CTGTCATTGC TGGTGTCACT
GTCGCTGGTG CTGTTGCACT TGGTGTTTTC ATTTATGGTG GTAAAAGAGG
TTATGACTAT TGGAAAGAAT CAAGAAATGT TCAATTCAGT GGTTCAAATT
CTAATCCACT TTATGAACAA AATCCAAATG GTTCTGGTGT AAATCCATTA
TATAATGATA ATTCTGCATT ATAAAATAAA ATTATGTCTA TATAAATCCT
TATTTATTCG AAAT

Translated Amino Acid Sequence VHD610

---GNCDLSDTVCQDGNECTTNVCESSDSVLGVCTNSTVECGATNTDKCIQFSCNEATGC
QQSAVVCPDVGSCLVGYCDSKQGCLTKPRSCDTGVFCLTGECIENAGGCIVYEKRCDADN
GRCQQGVCVNNTATEEGYCKSEDYDPLPFICKTGAVVSTAVIAGVTVAGAVALGVFIYGG
KRGYDYWKESRNVQFSGSNSNPLYEQNPNGSGVNPLYNDNSAL*nkimsi*iliysk

Homology VHD610 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHQ221 (VHQ221Q) /CSM/VH/VHQ2-A/VHQ221Q.Seq.d/                       1396   0.0
VHD610 (VHD610Q) /CSM/VH/VHD6-A/VHD610Q.Seq.d/                       1396   0.0
VFM306 (VFM306Q) /CSM/VF/VFM3-A/VFM306Q.Seq.d/                       1396   0.0
VFG436 (VFG436Q) /CSM/VF/VFG4-B/VFG436Q.Seq.d/                       1396   0.0
VHA408 (VHA408Q) /CSM/VH/VHA4-A/VHA408Q.Seq.d/                       1382   0.0
VHP731 (VHP731Q) /CSM/VH/VHP7-B/VHP731Q.Seq.d/                       1372   0.0
VHI743 (VHI743Q) /CSM/VH/VHI7-B/VHI743Q.Seq.d/                       1372   0.0
VHB544 (VHB544Q) /CSM/VH/VHB5-B/VHB544Q.Seq.d/                       1372   0.0
VHA637 (VHA637Q) /CSM/VH/VHA6-B/VHA637Q.Seq.d/                       1370   0.0
VHP644 (VHP644Q) /CSM/VH/VHP6-B/VHP644Q.Seq.d/                       1368   0.0

Homology VHD610 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U67940|U67940.1 Dictyostelium discoideum ORFveg106 mRNA, com...  1396   0.0    1
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...   113   2e-25  9
AC127321|AC127321.4 Mus musculus BAC clone RP23-231A8 from c...    50   0.088  1
ER665871|ER665871.1 SB_BBc223-A10.F SB_BBc Sorghum bicolor g...    48   0.35   1
AC092185|AC092185.3 Homo sapiens 3q BAC RP11-148O7 (Roswell ...    48   0.35   1
EJ281306|EJ281306.1 1095366054670 Global-Ocean-Sampling_GS-2...    36   0.95   2
AM412317|AM412317.1 Clostridium botulinum A str. ATCC 3502 c...    46   1.4    1
AC140323|AC140323.3 Mus musculus BAC clone RP24-325G15 from ...    46   1.4    1
AC131731|AC131731.4 Mus musculus BAC clone RP23-117K10 from ...    46   1.4    1
AC203187|AC203187.5 Rhesus Macaque  BAC CH250-16D1 () comple...    44   2.1    2

Homology VHD610 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   425   e-118
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                213   1e-53
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor;  &AC11695...   205   2e-51
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor;                179   2e-43
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor;  &AC11568...   170   5e-41
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                133   1e-29
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                131   3e-29
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos...    80   1e-13
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso...    78   5e-13
S44208(S44208) extracellular matrix protein B - Dictyostelium mi...    77   1e-12

Homology VHD610 vs Genome