Dictyostelium discoideum cDNA Clone VHD159

Sequence VHD159

ATTAAATATA TTTTTAAAAT CAACAATGTC TGAAGAAATT GAATTTAAAT
TGGAGTTATT AAAACTTGAA AAAGAACATC AAGAAAAGTT AGAGAAAGAA
GGGTATAAAC AAATTACTAT TGGAAAAGGT TACACTGTTT TAAGTAAAGA
AGAAAAGCCT TTACAATCGG TTTCTTCCTT CAGTAATCCA AAAAACGTAT
TTAATTTGGA CCAAGCTCAA ACTGCTAATA CCAATTTTGC CATTGATCGT
CATATTAAAA TGAAAGTTCC ACCAGATCCA TTGGTTTTTA TTAAAATGCC
TCGATCAAAA TTAGTTTGGG CATGGGTGAA GATCTCTACA GGTAGTTCAA
CTACTAGTTT AATAGGCAGT TTTACTCCTT GTGCTGCATA TATGAGATAC
ATTAAATCAT ATCCAGTTGT TGGTACCGTT GAACAAACTA TGGAAAAGAA
AAAAGGCTTT ACTTCAAGAT TTAATGCCAG TACTGAAATT AAGGCAAGTG
CATCAGCAGG GTTCTTTGGT TGTGAAGCAT CACTCGAAGT GACCACTGGT
TTCGAATATG AAGAAACTGT TACATCAGAG ACAACTCACA CATGGAAACA
AACTCTCACT GAGGGAACTT ATATTGTTTA TCAAAATGTT CTTGTTTATG
CATATACAAT AGTATTATCA CTAAATCAAA CTAATACTAT AAATCAATAT
AACCCAGGTA TGAATTTGAG ATATATCCAA CAAATAGATC GTGCTGTTAT
GTTTGTACCA ATCAATCGTG ATGATCCATT CACTCTTCGT TATCAAGATG
CCACATGGGA TCCAGTGGAG TATGATTCAT TAATTAACTA TTTGGTTGCA
AATCCAAGTA AATGGAGATC TGATTCATAA AGAAATAACC AAAAAAAGGT
TTTAAATAAT AAAATCANAT TTTTAT

Translated Amino Acid Sequence VHD159

LNIFLKSTMSEEIEFKLELLKLEKEHQEKLEKEGYKQITIGKGYTVLSKEEKPLQSVSSF
SNPKNVFNLDQAQTANTNFAIDRHIKMKVPPDPLVFIKMPRSKLVWAWVKISTGSSTTSL
IGSFTPCAAYMRYIKSYPVVGTVEQTMEKKKGFTSRFNASTEIKASASAGFFGCEASLEV
TTGFEYEETVTSETTHTWKQTLTEGTYIVYQNVLVYAYTIVLSLNQTNTINQYNPGMNLR
YIQQIDRAVMFVPINRDDPFTLRYQDATWDPVEYDSLINYLVANPSKWRSDS*rnnqkkv
lnnkixfl

Homology VHD159 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHD159 (VHD159Q) /CSM/VH/VHD1-C/VHD159Q.Seq.d/                       1788   0.0
VHG246 (VHG246Q) /CSM/VH/VHG2-B/VHG246Q.Seq.d/                       1780   0.0
VFI774 (VFI774Q) /CSM/VF/VFI7-D/VFI774Q.Seq.d/                       1772   0.0
VFF853 (VFF853Q) /CSM/VF/VFF8-C/VFF853Q.Seq.d/                       1756   0.0
VHI811 (VHI811Q) /CSM/VH/VHI8-A/VHI811Q.Seq.d/                       1754   0.0
VFL580 (VFL580Q) /CSM/VF/VFL5-D/VFL580Q.Seq.d/                       1754   0.0
VFL719 (VFL719Q) /CSM/VF/VFL7-A/VFL719Q.Seq.d/                       1750   0.0
VFH148 (VFH148Q) /CSM/VF/VFH1-B/VFH148Q.Seq.d/                       1748   0.0
VFD740 (VFD740Q) /CSM/VF/VFD7-B/VFD740Q.Seq.d/                       1709   0.0
VFH356 (VFH356Q) /CSM/VF/VFH3-C/VFH356Q.Seq.d/                       1701   0.0

Homology VHD159 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


X94341|X94341.1 D.discoideum mRNA for unknown protein with h...   692   0.0    3
U48706|U48706.1 Dictyostelium discoideum small aggregate for...    86   2e-50  6
M19469|M19469.1 Dictyostelium discoideum 109 gene 3, complet...    78   5e-10  1
AC189503|AC189503.1 Brassica rapa subsp. pekinensis clone KB...    38   0.022  7
BZ053765|BZ053765.1 jnr40h07.b1 B.oleracea001 Brassica olera...    38   0.088  2
DU128423|DU128423.1 KBrH113D23R Brassica rapa BAC library KB...    38   0.088  2
CT012372|CT012372.1 KBrH120B17 genomic clone, KBrH (HindIII)...    38   0.11   2
DX910756|DX910756.1 KBrH047H22R KBrH, Brassica rapa HindIII ...    38   0.13   2
EI313863|EI313863.1 GM_WBc0046D13.f GM_WBc Glycine max genom...    38   0.33   2
AC192544|AC192544.2 Spermophilus tridecemlineatus clone VMRC...    34   0.33   7

Homology VHD159 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116330_42(AC116330|pid:none) Dictyostelium discoideum chromoso...    62   6e-08
AC116330_41(AC116330|pid:none) Dictyostelium discoideum chromoso...    58   8e-07
CP000712_1048(CP000712|pid:none) Pseudomonas putida F1, complete...    46   0.003
AE017226_1555(AE017226|pid:none) Treponema denticola ATCC 35405,...    35   7.5
AP012047_989(AP012047|pid:none) Arcobacter butzleri ED-1 DNA, co...    34   9.8

Homology VHD159 vs Genome