Dictyostelium discoideum cDNA Clone VHD140

Sequence VHD140

AATGATTAAT ATTGAAGATA TTTCAAAATC TTCAAACCAA AGTGAAGAAA
AACAATTAAA AAGTACAAGT TCAAAACCAA AATACTCATT CGCAGCAAAA
AGTTTATTCA AAGGTTCAAA TAATATTACA CCATATTATT TATCAACCAG
TAATACATTC CAATGTGTAG CATCTGAGTC AATTCAAACA TGGCTTCTTT
CAGATGATGG TCATATCTTT ACATCCAGTG GTAATTTTGT TTTAGATGTT
TCATCAGGTG GTTATTTTGT TGAATTAGTA CAACTTAATT CAAATTCAAA
AACTCAAATT TGGACAATTG ATACAACAAA TAATAAAATT CAAAACCAAG
GTAATGGTAA ATACCTTGAT ATCGACAATT TGAATATTTG TGTTGCACCT
CTAAATGGAA ACGCAACTCA ACAATGGACA ACTTTTAGAA GAGCACCAAT
TCCAACTGGT AATTGGGGTT ACTTTCAAAG CAAACAAATG GATTCAAATA
ATAATTATTG GGGTTTAAGT GTATTAAATA ATAGTAAATC ATATAATACT
AGTGTAGTAA TGAATAAAGT TCAAGCAAAA TCAAAAGGTC AAATTTGGCA
AATGACAAAC GATGGTCACA TTTTATCACG TTTGGAT--- -------

Translated Amino Acid Sequence VHD140

MINIEDISKSSNQSEEKQLKSTSSKPKYSFAAKSLFKGSNNITPYYLSTSNTFQCVASES
IQTWLLSDDGHIFTSSGNFVLDVSSGGYFVELVQLNSNSKTQIWTIDTTNNKIQNQGNGK
YLDIDNLNICVAPLNGNATQQWTTFRRAPIPTGNWGYFQSKQMDSNNNYWGLSVLNNSKS
YNTSVVMNKVQAKSKGQIWQMTNDGHILSRL---

Homology VHD140 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHD140 (VHD140Q) /CSM/VH/VHD1-B/VHD140Q.Seq.d/                       1263   0.0
VHC206 (VHC206Q) /CSM/VH/VHC2-A/VHC206Q.Seq.d/                       1249   0.0
VHC670 (VHC670Q) /CSM/VH/VHC6-C/VHC670Q.Seq.d/                       1207   0.0
CHI549 (CHI549Q) /CSM/CH/CHI5-C/CHI549Q.Seq.d/                       1168   0.0
VHL659 (VHL659Q) /CSM/VH/VHL6-C/VHL659Q.Seq.d/                       1162   0.0
VHI475 (VHI475Q) /CSM/VH/VHI4-D/VHI475Q.Seq.d/                       1156   0.0
FCL-AB08 (FCL-AB08Q) /CSM/FCL/FCL-AB/FCL-AB08Q.Seq.d/                1148   0.0
VHI685 (VHI685Q) /CSM/VH/VHI6-D/VHI685Q.Seq.d/                       1142   0.0
VHM139 (VHM139Q) /CSM/VH/VHM1-B/VHM139Q.Seq.d/                       1132   0.0
VHJ768 (VHJ768Q) /CSM/VH/VHJ7-C/VHJ768Q.Seq.d/                       1112   0.0

Homology VHD140 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AY282568|AY282568.1 Dictyostelium discoideum calcium up-regu...   571   0.0    3
AY282572|AY282572.1 Dictyostelium discoideum calcium up-regu...   523   0.0    2
AY282569|AY282569.1 Dictyostelium discoideum calcium up-regu...   507   0.0    3
AY282570|AY282570.1 Dictyostelium discoideum calcium up-regu...   507   0.0    3
AY282574|AY282574.1 Dictyostelium discoideum calcium up-regu...   507   0.0    3
AY282573|AY282573.1 Dictyostelium discoideum calcium up-regu...   357   0.0    4
AY282571|AY282571.1 Dictyostelium discoideum calcium up-regu...   410   0.0    4
CA856368|CA856368.1 PfESToac60a04.y1 Plasmodium falciparum 3...    54   0.005  1
EJ712364|EJ712364.1 1092956084388 Global-Ocean-Sampling_GS-3...    36   0.81   2
CA856821|CA856821.1 PfESToac43a04.y1 Plasmodium falciparum 3...    46   1.2    1

Homology VHD140 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q7Z202) RecName: Full=Calcium up-regulated protein C;  &AY28256...   420   e-116
(Q7Z1I0) RecName: Full=Calcium up-regulated protein F;                416   e-115
AY282572_1(AY282572|pid:none) Dictyostelium discoideum calcium u...   416   e-115
AY282574_1(AY282574|pid:none) Dictyostelium discoideum calcium u...   414   e-114
(Q55FW5) RecName: Full=Calcium up-regulated protein A;                414   e-114
(Q7Z1Z9) RecName: Full=Calcium up-regulated protein G;  &AY28257...   413   e-114
GU951535_1(GU951535|pid:none) Camellia sinensis putative type 2 ...    39   0.16
(Q54Z20) RecName: Full=Putative calcium up-regulated protein J;        39   0.21
AY149015_1(AY149015|pid:none) Plasmodium chabaudi chabaudi PC13A...    39   0.27
DQ844940_1(DQ844940|pid:none) Small ruminant lentivirus isolate ...    38   0.35

Homology VHD140 vs Genome