Homology VHC670 vs Protein
Query= VHC670 (VHC670Q) /CSM/VH/VHC6-C/VHC670Q.Seq.d/
(1300 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q7Z202) RecName: Full=Calcium up-regulated protein C; &AY28256... 395 e-108
(Q7Z1I0) RecName: Full=Calcium up-regulated protein F; 391 e-107
AY282572_1(AY282572|pid:none) Dictyostelium discoideum calcium u... 391 e-107
(Q7Z1Z9) RecName: Full=Calcium up-regulated protein G; &AY28257... 390 e-107
(Q55FW5) RecName: Full=Calcium up-regulated protein A; 389 e-106
AY282574_1(AY282574|pid:none) Dictyostelium discoideum calcium u... 388 e-106
(Q54Z20) RecName: Full=Putative calcium up-regulated protein J; 44 0.003
GU951535_1(GU951535|pid:none) Camellia sinensis putative type 2 ... 39 0.50
AY149015_1(AY149015|pid:none) Plasmodium chabaudi chabaudi PC13A... 39 0.86
DQ844940_1(DQ844940|pid:none) Small ruminant lentivirus isolate ... 38 1.1
FJ648831_1(FJ648831|pid:none) Camellia sinensis putative type 2 ... 38 1.1
BC121700_1(BC121700|pid:none) Xenopus tropicalis GalNAc transfer... 38 1.1
(Q6H266) RecName: Full=Beta-galactoside-specific lectin 2; AltNa... 37 1.9
AP008955_3521(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 37 2.5
A90896_1(A90896|pid:none) Sequence 3 from Patent WO9829540. 37 2.5
FQ857210_49(FQ857210|pid:none) Piriformospora indica PIRI_contig... 37 2.5
FR845719_7347(FR845719|pid:none) Streptomyces venezuelae ATCC 10... 37 3.3
GU951537_1(GU951537|pid:none) Camellia sinensis putative type 2 ... 37 3.3
AF474005_1(AF474005|pid:none) Maedi-Visna virus isolate 489 enve... 36 4.3
CP001107_3484(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 36 4.3
CP001078_626(CP001078|pid:none) Clostridium botulinum E3 str. Al... 36 5.6
CP001700_4789(CP001700|pid:none) Catenulispora acidiphila DSM 44... 36 5.6
AM981401_1(AM981401|pid:none) Sambucus ebulus partial ar gene fo... 36 5.6
A58957_1(A58957|pid:none) Sequence 1 from Patent WO9701636. 35 7.3
AY081149_1(AY081149|pid:none) Viscum album lectin chain A isofor... 35 7.3
CP002551_1925(CP002551|pid:none) Methanobacterium sp. AL-21, com... 35 7.3
(Q86HL1) RecName: Full=Putative uncharacterized protein DDB_G027... 35 7.3
AY377890_1(AY377890|pid:none) Viscum album clone ml1p lectin I p... 35 7.3
Z72557_1(Z72557|pid:none) S.cerevisiae chromosome VII reading fr... 35 7.3
(P53185) RecName: Full=Uncharacterized protein YGL036W; &S64038... 35 7.3
A90902_1(A90902|pid:none) Sequence 9 from Patent WO9829540. 35 7.3
CP001810_998(CP001810|pid:none) Butyrivibrio proteoclasticus B31... 35 7.3
AL844507_90(AL844507|pid:none) Plasmodium falciparum 3D7 chromos... 35 7.3
AF474007_1(AF474007|pid:none) Maedi-Visna virus isolate 582 enve... 35 9.5
AF479638_5(AF479638|pid:none) Ovine lentivirus strain P1OLV, com... 35 9.5
AF474006_1(AF474006|pid:none) Maedi-Visna virus isolate 538 enve... 35 9.5
DQ822886_1(DQ822886|pid:none) Glycine max MYB transcription fact... 35 9.5
>(Q7Z202) RecName: Full=Calcium up-regulated protein C;
&AY282569_1(AY282569|pid:none)
Length = 769
Score = 395 bits (1014), Expect = e-108
Identities = 197/216 (91%), Positives = 201/216 (93%), Gaps = 1/216 (0%)
Frame = +2
Query: 74 EDISKSSNQSEEKQLKSTSSKPKYSFAAKSLFKGSNNITPYYLSTSNTFQCVASESIQTW 253
EDISKSSNQSEEKQLKSTSSK KY FAAKSLFKGSNNITPYYLSTSNTFQCVASESIQTW
Sbjct: 5 EDISKSSNQSEEKQLKSTSSKTKYPFAAKSLFKGSNNITPYYLSTSNTFQCVASESIQTW 64
Query: 254 LLSDDGHIFTSSGNFVLDVSSGGYFVELVQLNSNSKTQIWTIDTTNNKIQNQGNGKYLDI 433
LLSDDGHIFTSSGNFVLDVSSGGYFVELVQLNSNSKTQIWTIDTTNNKIQNQGNGKYLDI
Sbjct: 65 LLSDDGHIFTSSGNFVLDVSSGGYFVELVQLNSNSKTQIWTIDTTNNKIQNQGNGKYLDI 124
Query: 434 DNLNICVAPLNGNATQQWTTFRRAPIPTGNWGYFQSKQMDSNNNYWGLSVLNNSKSYNTS 613
DNLNICVAPLNGNATQ+WTTFRRAPIPTGNWGYFQSK++DSNNNYWGLSVLNNS SYNTS
Sbjct: 125 DNLNICVAPLNGNATQKWTTFRRAPIPTGNWGYFQSKKLDSNNNYWGLSVLNNSTSYNTS 184
Query: 614 VVMNKVQAKSKGQIWQMTXXXXILI-LQRNLPISYG 718
VVMNKVQAKS GQIWQMT IL L NL + G
Sbjct: 185 VVMNKVQAKSIGQIWQMTNDGHILSRLDGNLVLDIG 220
Score = 190 bits (483), Expect(2) = 2e-56
Identities = 93/127 (73%), Positives = 103/127 (81%)
Frame = +3
Query: 810 FGNIYKLAFPTIKNFTGVPMQFVMTNDGDNLCNFPVKTHFAKFFSIYYSCGDLGHHYFDI 989
+ ++KL+FPT+KNFT VPMQFVMTN D + F VKTHFA S YY G LGHHY+DI
Sbjct: 642 YSGMFKLSFPTVKNFTSVPMQFVMTNGSDRVGTFNVKTHFAGLASTYYYSGALGHHYYDI 701
Query: 990 AVNDINDNKVANFTVDINLEAIEGSYVSIKTGSLVVQPGYAVGNPICNQGSYSLMFSASI 1169
AV DIN NKVANFTVD NLEA+EGSYVSIKT SLVVQPGY VGNP CNQGS+S F+ASI
Sbjct: 702 AVIDINGNKVANFTVDNNLEALEGSYVSIKTNSLVVQPGYVVGNPTCNQGSFSQGFAASI 761
Query: 1170 LIPIYKS 1190
LIPIYKS
Sbjct: 762 LIPIYKS 768
Score = 54.7 bits (130), Expect(2) = 2e-56
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +2
Query: 719 NNGVSKQEFFWPAYGWNLATSLTYYNMANKF 811
NNGVSKQE F +YGWNLATS+TYYNM K+
Sbjct: 612 NNGVSKQEVFTSSYGWNLATSVTYYNMVGKY 642
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,992,164,728
Number of extensions: 58462500
Number of successful extensions: 157634
Number of sequences better than 10.0: 37
Number of HSP's gapped: 157436
Number of HSP's successfully gapped: 48
Length of query: 433
Length of database: 1,732,582,204
Length adjustment: 135
Effective length of query: 298
Effective length of database: 1,010,438,449
Effective search space: 301110657802
Effective search space used: 301110657802
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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