Dictyostelium discoideum cDNA Clone VHC670

Sequence VHC670

AAAAAATAAC TTTTAAAACA AATAATTTAA ATAAAAAAAT AAAAAAATAA
AAAATAAAAA AATGATTAAT ATTGAAGATA TTTCAAAATC TTCAAACCAA
AGTGAAGAAA AACAATTAAA AAGTACAAGT TCAAAACCAA AATACTCATT
CGCAGCAAAA AGTTTATTCA AAGGTTCAAA TAATATTACA CCATATTATT
TATCAACCAG TAATACATTC CAATGTGTAG CATCTGAGTC AATTCAAACA
TGGCTTCTTT CAGATGATGG TCATATCTTT ACATCCAGTG GTAATTTTGT
TTTAGATGTT TCATCAGGTG GTTATTTTGT TGAATTAGTA CAACTTAATT
CAAATTCAAA AACTCAAATT TGGACAATTG ATACAACAAA TAATAAAATT
CAAAACCAAG GTAATGGTAA ATACCTTGAT ATCGACAATT TGAATATTTG
TGTTGCACCT CTAAATGGAA ACGCAACTCA ACAATGGACA ACTTTTAGAA
GAGCACCAAT TCCAACTGGT AATTGGGGTT ACTTTCAAAG CAAACAAATG
GATTCAAATA ATAATTATTG GGGTTTAAGT GTATTAAATA ATAGTAAATC
ATATAATACT AGTGTAGTAA TGAATAAAGT TCAAGCAAAA TCAAAAGGTC
AAATTTGGCA AATGACAAA- ---------A TTCTTATCCT CCAAAGGAAT
TTACCGATAA GTTATGGNAA TAATGGGGTT TCAAAACAAG AATTTTTCTG
GCCAGCTTAT GGTTGGAATT TAGCTACCTC ACTCACCTAT TACAATATGG
CAAACAAGTT TTGGTAATAT CTATAAATTA GCTTTTCCAA CAATTAAAAA
TTTTACAGGA GTACCAATGC AATTTGTAAT GACCAATGAT GGTGATAATC
TTTGTAATTT CCCAGTCAAA ACTCATTTTG CAAAATTTTT TTCTATATAT
TACAGTTGTG GAGATCTTGG TCATCATTAT TTCGACATTG CCGTAAATGA
TATTAACGAT AACAAGGTTG CAAATTTCAC AGTTGATATT AATTTAGAAG
CTATTGAAGG AAGTTATGTT TCAATCAAAA CTGGTTCATT AGTTGTTCAG
CCAGGTTATG CTGTTGGTAA TCCAATTTGT AATCAAGGTA GTTATTCTCT
AATGTTTTCT GCTTCAATTT TAATTCCAAT TTATAAATCA GAATAAAAAA
TAAAATTATC GGAATATAAA AATCAATTTA TATTCTTTTC AATTATTAAA
AATTAAAAAT AAAATAAAAT AAAATCCTTA CATCGACTAT AAAAAAAAAA

Translated Amino Acid Sequence VHC670

knnf*nk*fk*KNKKIKNKKMINIEDISKSSNQSEEKQLKSTSSKPKYSFAAKSLFKGSN
NITPYYLSTSNTFQCVASESIQTWLLSDDGHIFTSSGNFVLDVSSGGYFVELVQLNSNSK
TQIWTIDTTNNKIQNQGNGKYLDIDNLNICVAPLNGNATQQWTTFRRAPIPTGNWGYFQS
KQMDSNNNYWGLSVLNNSKSYNTSVVMNKVQAKSKGQIWQMT---

---ILILQRNLPISYGNNGVSKQEFFWPAYGWNLATSLTYYNMANKFW*yl*isfsnn*k
fyrstnaicndq*w**sl*fpsqnsfckiffyilqlwrswsslfrhcrk*y*r*qgckfh
s*y*frsy*rklcfnqnwfiscsarlccw*snl*sr*lfsnvfcfnfnsnl*iriknkii
gi*ksiyilfny*klkik*nkiltstikkk

Homology VHC670 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHC670 (VHC670Q) /CSM/VH/VHC6-C/VHC670Q.Seq.d/                       2079   0.0
VHD140 (VHD140Q) /CSM/VH/VHD1-B/VHD140Q.Seq.d/                       1203   0.0
VHC206 (VHC206Q) /CSM/VH/VHC2-A/VHC206Q.Seq.d/                       1203   0.0
VHL659 (VHL659Q) /CSM/VH/VHL6-C/VHL659Q.Seq.d/                       1158   0.0
FCL-AB08 (FCL-AB08Q) /CSM/FCL/FCL-AB/FCL-AB08Q.Seq.d/                1144   0.0
VHI685 (VHI685Q) /CSM/VH/VHI6-D/VHI685Q.Seq.d/                       1138   0.0
VHM139 (VHM139Q) /CSM/VH/VHM1-B/VHM139Q.Seq.d/                       1128   0.0
VHJ768 (VHJ768Q) /CSM/VH/VHJ7-C/VHJ768Q.Seq.d/                       1108   0.0
VHI475 (VHI475Q) /CSM/VH/VHI4-D/VHI475Q.Seq.d/                       1108   0.0
CHI549 (CHI549Q) /CSM/CH/CHI5-C/CHI549Q.Seq.d/                       1108   0.0

Homology VHC670 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AY282568|AY282568.1 Dictyostelium discoideum calcium up-regu...   515   0.0    7
AY282572|AY282572.1 Dictyostelium discoideum calcium up-regu...   468   0.0    8
AY282574|AY282574.1 Dictyostelium discoideum calcium up-regu...   452   0.0    9
AY282569|AY282569.1 Dictyostelium discoideum calcium up-regu...   452   0.0    9
AY282573|AY282573.1 Dictyostelium discoideum calcium up-regu...   357   0.0    8
AY282571|AY282571.1 Dictyostelium discoideum calcium up-regu...   410   0.0    9
AY282570|AY282570.1 Dictyostelium discoideum calcium up-regu...   452   0.0    5
CA856368|CA856368.1 PfESToac60a04.y1 Plasmodium falciparum 3...    54   0.010  1
AC091835|AC091835.2 Homo sapiens chromosome 5 clone CTD-2055...    48   0.64   1
CE322726|CE322726.1 tigr-gss-dog-17000361361739 Dog Library ...    48   0.64   1

Homology VHC670 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q7Z202) RecName: Full=Calcium up-regulated protein C;  &AY28256...   395   e-108
(Q7Z1I0) RecName: Full=Calcium up-regulated protein F;                391   e-107
AY282572_1(AY282572|pid:none) Dictyostelium discoideum calcium u...   391   e-107
(Q7Z1Z9) RecName: Full=Calcium up-regulated protein G;  &AY28257...   390   e-107
(Q55FW5) RecName: Full=Calcium up-regulated protein A;                389   e-106
AY282574_1(AY282574|pid:none) Dictyostelium discoideum calcium u...   388   e-106
(Q54Z20) RecName: Full=Putative calcium up-regulated protein J;        44   0.002
GU951535_1(GU951535|pid:none) Camellia sinensis putative type 2 ...    39   0.48
AY149015_1(AY149015|pid:none) Plasmodium chabaudi chabaudi PC13A...    39   0.81
DQ844940_1(DQ844940|pid:none) Small ruminant lentivirus isolate ...    38   1.1

Homology VHC670 vs Genome