<List of Series> <Series: VHC6-A> <Clone: VHC604> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone VHC604
Dictyostelium discoideum cDNA Project Home
Sequence VHC604
AAATCACCAC TTGTAATATT ATATATATAT AAATTTATTA TTATTATTAT
TATTATTATT TTTTTTTGTA TTATTATTAT TATTTTTTTT TATTTCCACA
AACACACGCA ATCACACAAC CATNGCCATC AATCACACCC AATATATACA
TTTTAATAAA TACGCTCAAT AAAAAAAAAA ---------- ACAACGAGTA
TATGGCACGT TTTGCAAATA TGGTCAACGA GATTAGAGCG GCCAAAGCTC
GTGGTCCAAA GGAACCATTG CCATTGGCAG AGTCTGATAT TCAAGCAATC
ACATTGATGG GTTTGAGGAT TCTCTCTGAT TGGACCTCAA GAGTACTTCA
ACAATCGGCT TGGAAATATT CTAAACCAAA CAATGATCCA ACCATTTCAG
CAACCTTTGA TTATGAACGT GTCGTTAAAT TCAATTATAC CAAAGAGGAG
AGAACCGCTT TGGTTCAATT GATCGCCATG ATCAAATCAT TGGCTTCATT
GATGATGAAG AGTGAAACAT TACTTCAACC AATACTTCGT AAGACCATTC
ATCAAGAGTT GCAAGAGTTT GTTCAAATCA ATCTCAAAGA GACCATTAAA
TCCTTTGTAA AGAATAATCC AAAGAAGAAG GATAACATCA AATTGGAGAT
GTCACAATTG AAGAATATCT CTGTCGATTG GTTCAGTGGT TT
Translated Amino Acid Sequence VHC604
<All Frames>
ittcniiyi*IYYYYYYYYFFLYYYYYFFLFPQTHAITQPXPSITPNIYILINTLNKKK-
--
---NEYMARFANMVNEIRAAKARGPKEPLPLAESDIQAITLMGLRILSDWTSRVLQQSAW
KYSKPNNDPTISATFDYERVVKFNYTKEERTALVQLIAMIKSLASLMMKSETLLQPILRK
TIHQELQEFVQINLKETIKSFVKNNPKKKDNIKLEMSQLKNISVDWFSG
Homology VHC604 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
VHC604 (VHC604Q) /CSM/VH/VHC6-A/VHC604Q.Seq.d/ 995 0.0
AHK356 (AHK356Q) /CSM/AH/AHK3-C/AHK356Q.Seq.d/ 977 0.0
AHI551 (AHI551Q) /CSM/AH/AHI5-C/AHI551Q.Seq.d/ 914 0.0
VHP502 (VHP502Q) /CSM/VH/VHP5-A/VHP502Q.Seq.d/ 844 0.0
VHE283 (VHE283Q) /CSM/VH/VHE2-D/VHE283Q.Seq.d/ 842 0.0
VHG686 (VHG686Q) /CSM/VH/VHG6-D/VHG686Q.Seq.d/ 785 0.0
SHI756 (SHI756Q) /CSM/SH/SHI7-C/SHI756Q.Seq.d/ 729 0.0
SHI590 (SHI590Q) /CSM/SH/SHI5-D/SHI590Q.Seq.d/ 704 0.0
VHJ827 (VHJ827Q) /CSM/VH/VHJ8-B/VHJ827Q.Seq.d/ 646 0.0
AHJ856 (AHJ856Q) /CSM/AH/AHJ8-C/AHJ856Q.Seq.d/ 505 e-142
Homology VHC604 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
AY368270|AY368270.1 Dictyostelium discoideum Rac-binding com... 995 0.0 1
EK381364|EK381364.1 1095469462626 Global-Ocean-Sampling_GS-3... 52 0.021 1
AP006347|AP006347.1 Lotus japonicus genomic DNA, chromosome ... 48 0.33 1
AX653967|AX653967.1 Sequence 3837 from Patent WO03000898. 46 1.3 1
CL965785|CL965785.1 OsIFCC012746 Oryza sativa Express Librar... 46 1.3 1
AP008208|AP008208.1 Oryza sativa (japonica cultivar-group) g... 46 1.3 1
AP004087|AP004087.3 Oryza sativa (japonica cultivar-group) g... 46 1.3 1
AC109180|AC109180.20 Mus musculus chromosome 10, clone RP23-... 46 1.3 1
BJ701745|BJ701745.1 Ptyochromis sp. 'redtail sheller' cDNA c... 34 2.2 2
AX647391|AX647391.1 Sequence 1583 from Patent EP1270724. 36 4.6 2
Homology VHC604 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q6UK63) RecName: Full=Protein pirA; &AY368270_1(AY368270|pid:n... 326 5e-88
CP002688_2277(CP002688|pid:none) Arabidopsis thaliana chromosome... 111 3e-23
AY496701_1(AY496701|pid:none) Arabidopsis thaliana ARP2/3 regula... 111 3e-23
AC146587_24(AC146587|pid:none) Medicago truncatula clone mth2-14... 111 3e-23
AM946363_1(AM946363|pid:none) Lotus japonicus pir gene for 121F-... 111 3e-23
AY122203_1(AY122203|pid:none) Drosophila melanogaster LD47929 fu... 111 4e-23
(Q299G2) RecName: Full=Cytoplasmic FMR1-interacting protein; Alt... 111 4e-23
BT011115_1(BT011115|pid:none) Drosophila melanogaster LD19991 fu... 111 4e-23
(Q9VF87) RecName: Full=Cytoplasmic FMR1-interacting protein; Alt... 111 4e-23
AY687629_1(AY687629|pid:none) Aplysia californica cytoplasmic fr... 100 8e-20
Homology VHC604 vs Genome
<more Genome info>
<List of Series> <Series: VHC6-A> <Clone: VHC604> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home