Dictyostelium discoideum cDNA Clone VHC269

Sequence VHC269

ATCAAATTGA ATTAATAATA TAAATACAAT GGGTAACAGA GCATTCAAAT
CACATCACGG TCACTTTTTA AGCGCTGAAG GCGAAGCTGT AAAGACTCAC
CACGGTCATC ATGATCATCA CACCCATTTC CACGTTGAAA ACCATGGTGG
TAAAGTTGCA TTAAAGACCC ATTGCGGTAA ATACCTTTCA ATTGGTGATC
ATAAACAAGT TTACCTCTCA CACCACTTAC ACGGTGACCA CTCACTCTTC
CACTTAGAAC ATCATGGCGG TAAAGTCTCA ATCAAAGGTC ATCACCACCA
CTACATTTCC GCTGATCATC ATGGTCATGT TTCAACCAAA GAACACCACG
ATCACGACAC CACCTTTGAA GAAATTATTA TTTAAACTAA TTTTTTAATA
CCAATAAATT TAAAATGATG TTGTNAATAA AAAAAAAA-- --------AA
CTGAAATTAA CCCTTACAAC TATCTTAAAG TGTCACCAGA AGAGACCAAA
CAAAGAGTAA TCTCAATAAT GGATTGTAAA AAATTGGAAG ATGAACCACT
ATCCAGATCA AGAAATATCG ATGATGATAC CTATCAAAAG GTTTGCATGA
TCGCTGGTCG TCTATTCTNT GGTAT

Translated Amino Acid Sequence VHC269

ikln**ykyng*qsiqitsrslfkr*rrsckdsprss*sshpfpr*kpww*scikdplr*
ipfnw*s*tslpltpltr*pltlplrtswr*slnqrsspplhfr*sswscfnqrtprsrh
hl*rnyyln*FFNTNKFKMMLXIKKK---

---TEINPYNYLKVSPEETKQRVISIMDCKKLEDEPLSRSRNIDDDTYQKVCMIAGRLFX
G

Homology VHC269 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHC269 (VHC269Q) /CSM/VH/VHC2-C/VHC269Q.Seq.d/                        842   0.0
VFG268 (VFG268Q) /CSM/VF/VFG2-C/VFG268Q.Seq.d/                        842   0.0
VFH455 (VFH455Q) /CSM/VF/VFH4-C/VFH455Q.Seq.d/                        837   0.0
VFC761 (VFC761Q) /CSM/VF/VFC7-C/VFC761Q.Seq.d/                        837   0.0
SSJ630 (SSJ630Q) /CSM/SS/SSJ6-B/SSJ630Q.Seq.d/                        833   0.0
SSI213 (SSI213Q) /CSM/SS/SSI2-A/SSI213Q.Seq.d/                        833   0.0
VFE257 (VFE257Q) /CSM/VF/VFE2-C/VFE257Q.Seq.d/                        831   0.0
VSI680 (VSI680Q) /CSM/VS/VSI6-D/VSI680Q.Seq.d/                        825   0.0
VHD583 (VHD583Q) /CSM/VH/VHD5-D/VHD583Q.Seq.d/                        817   0.0
VFA186 (VFA186Q) /CSM/VF/VFA1-D/VFA186Q.Seq.d/                        807   0.0

Homology VHC269 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


J04472|J04472.1 D.discoideum hisactophilin mRNA, complete cds.    842   0.0    1
AF544403|AF544403.1 Expression vector pNCO113-hisactophilin,...   702   0.0    1
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma...   337   2e-88  1
U13671|U13671.1 Dictyostelium discoideum hisactophilin II (h...   268   8e-80  2
DN537696|DN537696.1 1373915 MARC 7BOV Bos taurus cDNA 3', mR...    48   0.30   1
DN536291|DN536291.1 1372379 MARC 7BOV Bos taurus cDNA 5', mR...    48   0.30   1
CO888690|CO888690.1 BovGen_17015 normal cattle brain Bos tau...    48   0.30   1
BF440292|BF440292.1 BS29000192603 Lewin Cattle Spleen Bos ta...    48   0.30   1
AC159867|AC159867.2 Bos taurus clone CH240-71K2, *** SEQUENC...    48   0.30   1
EK054576|EK054576.1 1092960004367 Global-Ocean-Sampling_GS-3...    48   0.30   1

Homology VHC269 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P13231) RecName: Full=Hisactophilin-1; AltName: Full=Histidine-...   220   4e-56
AF544403_1(AF544403|pid:none) Expression vector pNCO113-hisactop...   220   4e-56
EF493211_1(EF493211|pid:none) Expression vector pNCO-HISACT-(C49...   216   5e-55
(P42526) RecName: Full=Hisactophilin-2; AltName: Full=Histidine-...   184   4e-45
(Q55AX0) RecName: Full=Dynamin-like protein C;          EC=3.6.5...   117   5e-25
AC116982_36(AC116982|pid:none) Dictyostelium discoideum chromoso...   117   5e-25
CP002418_1663(CP002418|pid:none) Rhodopseudomonas palustris DX-1...    48   4e-04
CP001186_4753(CP001186|pid:none) Bacillus cereus G9842, complete...    48   4e-04
CP001746_4505(CP001746|pid:none) Bacillus cereus biovar anthraci...    47   5e-04
AE014188_480(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    47   5e-04

Homology VHC269 vs Genome