Dictyostelium discoideum cDNA Clone VHB660

Sequence VHB660

CATCAACATC AACATCAACA TCAACATCAA CATCAACATC AACATCAACA
CCATTACAAA CACCTACATC ACTTGTATCA TTATCAAATA TTTCATTATC
AACCATTTCA ATTCCAATTC AACCAAATAC ATCATCAATT CTATTAGATA
GTAGTATGAA CGATAGTTTT AATAAGGAAA GTAGTGGAAG TAATAAAGTA
GCTAACCCAA CCATTAGAAA AAGGGATATT ATATTAATGA GTAATTTAGA
AGGTATTTGG AATGATATTC CAACAAGATT ATATCCATAT TTATTAACAT
TGGCCAAGAA ATTTAATATA GCTTATCAAA TTGATACACT CTATGATCCA
ACTTCTTGGG GCTTTGTTTA TCCATCACCA ATTTCTAATC AACAACAACA
ACAACAACAA CAATCATCAA CTCAACACCA ACACCAACAC CACCACCACC
AACAACAACA ACAAACTAGT ATAAATTTAA ATAGATTATC AATTAGTGGT
AGTCCATCAT TAAGATCAAT TTCAATTCGT AATGGTGGTA ATATTAATAC
ATTAAATTCA AGTGGATCAA ATAATTCAAG TCCATTAAAA TT--------
--AAAGGTAT CGCAGCATCT TTACAAACGC TTCATGATAG TAGACCATCA
GTGGTTCATC GTGATTTAAA GAGTCCAAAT ATCNTACTCT CAAGTAAAGA
TTCATTAACT ATGGAATGCC ATCTTTGTGA TTTCTCATTA TCAGGCTTCT
CAACCACCGT TGCAAATCGT TCGGTTCAAA ATCCAGTTTG GTTAGCTCCA
GAGGTAATAA ACAATGAATT ATGTTCGGAT AAAAGTGATG TCTATGCATA
TGGTGTAATC CTATTTGAAC TTTTATCACG TACAAGATTC TTTTCAAATA
TTACCTTTAT GTCTGAAGTT GAAGGTTTAA TTACCGAGGG TGTACGTCCA
TCACTACCAT CTCATAATTT ACCAGAGTAT GATAGCCTTT TAAATATCTG
TTGGGCTCAA GATCCAACTT GTCGTCCTTC CTTTATTGAA ATTACAAAGA
AATTAGAAGA AATTGAACTA ATCTTAAAAA CTCATACTCC AGTTGAACCA
GTTTACACAG AAACTTCAAA GAATCAACAT ATTCAATTAA ATAGAGGAAA
TACTATATAT ACCCTTGTTA AAAGACCAAT AACACCAATT CAACAACAAC
AACAACAAAA ACAACAACAA CTACAACAAC AAAAACAATC TCCAAAACAA
TTACAACAAC AAAAACCATT ACCAACTCCT CCAAAACAAC TTTCAAATAA
TGATTCTACT CCAACAAAAC CATTAGANAT TCTAGGNATA GTAGTAGNAA
GATTCA

Translated Amino Acid Sequence VHB660

STSTSTSTSTSTSTSTPLQTPTSLVSLSNISLSTISIPIQPNTSSILLDSSMNDSFNKES
SGSNKVANPTIRKRDIILMSNLEGIWNDIPTRLYPYLLTLAKKFNIAYQIDTLYDPTSWG
FVYPSPISNQQQQQQQQSSTQHQHQHHHHQQQQQTSINLNRLSISGSPSLRSISIRNGGN
INTLNSSGSNNSSPLK---

---KGIAASLQTLHDSRPSVVHRDLKSPNIXLSSKDSLTMECHLCDFSLSGFSTTVANRS
VQNPVWLAPEVINNELCSDKSDVYAYGVILFELLSRTRFFSNITFMSEVEGLITEGVRPS
LPSHNLPEYDSLLNICWAQDPTCRPSFIEITKKLEEIELILKTHTPVEPVYTETSKNQHI
QLNRGNTIYTLVKRPITPIQQQQQQKQQQLQQQKQSPKQLQQQKPLPTPPKQLSNNDSTP
TKPLXILGIVVXRF

Homology VHB660 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHB660 (VHB660Q) /CSM/VH/VHB6-C/VHB660Q.Seq.d/                       1370   0.0
VHE294 (VHE294Q) /CSM/VH/VHE2-D/VHE294Q.Seq.d/                       1160   0.0
VFO465 (VFO465Q) /CSM/VF/VFO4-C/VFO465Q.Seq.d/                       1160   0.0
AHH160 (AHH160Q) /CSM/AH/AHH1-C/AHH160Q.Seq.d/                       1160   0.0
SFD569 (SFD569Q) /CSM/SF/SFD5-C/SFD569Q.Seq.d/                       1136   0.0
VHE712 (VHE712Q) /CSM/VH/VHE7-A/VHE712Q.Seq.d/                        872   0.0
FC-IC1358 (FC-IC1358Q) /CSM/FC-IC/FC-IC1358Q.Seq.d/                   547   e-154
SHC242 (SHC242Q) /CSM/SH/SHC2-B/SHC242Q.Seq.d/                        432   e-120
AHG228 (AHG228Q) /CSM/AH/AHG2-B/AHG228Q.Seq.d/                        188   2e-46
VHJ601 (VHJ601Q) /CSM/VH/VHJ6-A/VHJ601Q.Seq.d/                         56   1e-06

Homology VHB660 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AY232271|AY232271.1 Dictyostelium discoideum putative protei...  1160   0.0    1
AY232268|AY232268.1 Dictyostelium discoideum putative protei...    56   0.003  1
EJ669762|EJ669762.1 1092955054168 Global-Ocean-Sampling_GS-3...    38   0.033  2
EJ670893|EJ670893.1 1092955057048 Global-Ocean-Sampling_GS-3...    38   0.033  2
EK096404|EK096404.1 1092962039889 Global-Ocean-Sampling_GS-3...    38   0.034  2
CQ605966|CQ605966.1 Sequence 33724 from Patent WO0171042.          48   0.65   1
AC017833|AC017833.1 Drosophila melanogaster, *** SEQUENCING ...    48   0.65   1
AC006497|AC006497.5 Drosophila melanogaster strain y; cn bw ...    48   0.65   1
BH166980|BH166980.1 ENTSZ33TF Entamoeba histolytica Sheared ...    48   0.65   1
BH166449|BH166449.1 ENTTS69TR Entamoeba histolytica Sheared ...    48   0.65   1

Homology VHB660 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q6XHA7) RecName: Full=Probable serine/threonine-protein kinase ...   371   e-101
(Q55E58) RecName: Full=Probable serine/threonine-protein kinase ...   124   9e-27
AY170918_1(AY170918|pid:none) Dictyostelium discoideum pats1 gen...   124   9e-27
(Q8MVR1) RecName: Full=Cyclic GMP-binding protein C;          EC...   108   9e-22
EF146477_1(EF146477|pid:none) Populus trichocarpa clone WS0118_H...   105   4e-21
(Q1ZXD6) RecName: Full=Probable serine/threonine-protein kinase ...   105   4e-21
AP005558_11(AP005558|pid:none) Oryza sativa Japonica Group genom...   100   2e-19
FB918162_1(FB918162|pid:none) Sequence 137435 from Patent WO2008...   100   3e-19
BT066283_1(BT066283|pid:none) Zea mays full-length cDNA clone ZM...   100   3e-19
BT033593_1(BT033593|pid:none) Zea mays full-length cDNA clone ZM...   100   3e-19

Homology VHB660 vs Genome