Dictyostelium discoideum cDNA Clone VHB307

Sequence VHB307

---------- GGCCAACTCA AAACACTGCA AACTGTAATT TACCTCGTGA
AATCCTCTTA TGTTGTGAGG CTTTCAAATC TTATTATCTA TCAAATCATA
ATGGTCGTCT ATTGTTATGG CAAACTAATA TGGGTACCGC AGAAATTAAA
GCAAACTTCC CTTCGAAATC TCACGAACTT CAAGGTTTCC TCCTATCAAA
TGGTCATCTT ATTACTCTTT AATGACCAAT CGAAATTAAC CTTTAAAGAG
ATTGCTGATC AAACTGGTAT TCCAACTATT GATTTAAAGA GAAATCTTTT
AGCTTTAACA AATCCAAAGA ATAAAATTTT AGATAGAGAA TTACCATCAA
CAACATCATC AACAACAACA ACAACAACAA CAGCAACATC ATCATCAACT
TCAACTTCAC CATCTAGTAG TTCATCTTCA ATCTCCACTC CAACACCAAG
TAAATCAATT GATGAATCCG ATGTATTCGC TTTTAATACT AAATTTAAGA
GTAAATTATT CCGTGTTAAA GTTATGGCAG TCGTTCAAAA AGAAACACCA
GTTGAAGAGA AAGAAACTCG TGATAAAGTT GATGAAGATA GAAAACATCA
AATTGAAGCT TCCATCGTTC GTATTATGAA AGCTCGTAAA ACACTTGAAC
ACTCTAATCT TGTCTCTGAA GTCATCAAGC AACTTCAATC TCGTTTTGTT
CCAAATCCAG TCATTGTAAA GAAACGTATC GAATCTTTAA TTGAAAGAGA
ATATNCTGAA AGNATCAAAA CAAGACAGNA A

Translated Amino Acid Sequence VHB307

---QLKTLQTVIYLVKSSYVVRLSNLIIYQIIMVVYCYGKLIWVPQKLKQTSLRNLTNFK
VSSYQMVILLLFNDQSKLTFKEIADQTGIPTIDLKRNLLALTNPKNKILDRELPSTTSST
TTTTTTATSSSTSTSPSSSSSSISTPTPSKSIDESDVFAFNTKFKSKLFRVKVMAVVQKE
TPVEEKETRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKK
RIESLIEREYXEXIKTRQX

Homology VHB307 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHB307 (VHB307Q) /CSM/VH/VHB3-A/VHB307Q.Seq.d/                        728   0.0
AFG826 (AFG826Q) /CSM/AF/AFG8-B/AFG826Q.Seq.d/                        712   0.0
SSI609 (SSI609Q) /CSM/SS/SSI6-A/SSI609Q.Seq.d/                        710   0.0
SSC509 (SSC509Q) /CSM/SS/SSC5-A/SSC509Q.Seq.d/                        704   0.0
CHC421 (CHC421Q) /CSM/CH/CHC4-A/CHC421Q.Seq.d/                        696   0.0
VHQ327 (VHQ327Q) /CSM/VH/VHQ3-B/VHQ327Q.Seq.d/                        694   0.0
CFK287 (CFK287Q) /CSM/CF/CFK2-D/CFK287Q.Seq.d/                        684   0.0
CHQ457 (CHQ457Q) /CSM/CH/CHQ4-C/CHQ457Q.Seq.d/                        668   0.0
VHH207 (VHH207Q) /CSM/VH/VHH2-A/VHH207Q.Seq.d/                        666   0.0
VSK353 (VSK353Q) /CSM/VS/VSK3-C/VSK353Q.Seq.d/                        597   e-169

Homology VHB307 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AF144717|AF144717.1 Dictyostelium discoideum CulB mRNA, comp...    50   4e-07  2
BJ570910|BJ570910.1 Ipomoea nil cDNA clone:jm9p22, 3' end, s...    56   0.002  1
BI503545|BI503545.1 BB170031B10G04.5 Bee Brain Normalized/Su...    54   0.006  1
AC084281|AC084281.5 Homo sapiens BAC clone RP11-755P23 from ...    44   0.13   3
BZ291826|BZ291826.1 SALK_121895.48.50.x Arabidopsis thaliana...    36   0.49   2
AC195509|AC195509.1 Pan troglodytes chromosome 15 clone CH25...    42   1.2    5
DN502894|DN502894.1 X043H07.5pR Populus wood cDNA library Po...    46   1.5    1
BU896665|BU896665.1 X043H07 Populus wood cDNA library Populu...    46   1.5    1
AC145943|AC145943.1 Gallus gallus chromosome UNK clone CH261...    34   2.7    2
AC145944|AC145944.3 Gallus gallus chromosome UNK clone CH261...    34   2.8    2

Homology VHB307 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54NZ5) RecName: Full=Cullin-3;          Short=CUL-3; AltName: ...   283   e-105
FB802359_1(FB802359|pid:none) Sequence 21632 from Patent WO20080...   155   4e-53
AK072402_1(AK072402|pid:none) Oryza sativa Japonica Group cDNA c...   157   2e-52
AM484063_2(AM484063|pid:none) Vitis vinifera contig VV78X066416....   152   9e-52
FB802477_1(FB802477|pid:none) Sequence 21750 from Patent WO20080...   153   8e-51
BT069454_1(BT069454|pid:none) Zea mays full-length cDNA clone ZM...   153   8e-51
HB836854_1(HB836854|pid:none) Sequence 186068 from Patent EP2090...   153   1e-50
AL606454_2(AL606454|pid:none) Oryza sativa genomic DNA, chromoso...   155   1e-50
AM478489_5(AM478489|pid:none) Vitis vinifera contig VV78X092018....   149   2e-50
AK230392_1(AK230392|pid:none) Arabidopsis thaliana mRNA for cull...   149   8e-50

Homology VHB307 vs Genome