Homology VFO825 vs Protein

Query= VFO825 (VFO825Q) /CSM/VF/VFO8-B/VFO825Q.Seq.d/
         (1223 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54WU0) RecName: Full=Probable basic-leucine zipper transcripti...   285   3e-75
CR533423_1(CR533423|pid:none) Paramecium tetraurelia, complete g...    36   3.9
CP002403_347(CP002403|pid:none) Ruminococcus albus 7, complete g...    35   8.7

>(Q54WU0) RecName: Full=Probable basic-leucine zipper transcription
            factor C;
          Length = 804

 Score =  285 bits (730), Expect = 3e-75
 Identities = 153/198 (77%), Positives = 153/198 (77%)
 Frame = +3

Query: 582  ESIRNWATLPQNSVASLSFEKDNALKTIENANLDKSKHNVISXXXXXXXXXPSSDELMID 761
            ESIRNWATLPQNSVASLSFEKDNALKTIENANLDKSKHNVIS         PSSDELMID
Sbjct: 606  ESIRNWATLPQNSVASLSFEKDNALKTIENANLDKSKHNVISNLNQLQQQQPSSDELMID 665

Query: 762  QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTTTTISPTRYVNNSTISLLVNP 941
            Q                                    STTTTISPTRYVNNSTISLLVNP
Sbjct: 666  QKEEKNCNNNNENNNNNDNNKNSDDEKGKEIEEIKRKSTTTTISPTRYVNNSTISLLVNP 725

Query: 942  TSVIGDIPDDLMKNSNVTTFGENSSFKFNFLIDTQNFPNGSNDISKAFFDNENQQMTVTS 1121
            TSVIGDIPDDLMKNSNVTTFGENSSFKFNFLIDTQNFPNGSNDISKAFFDNENQQMTVTS
Sbjct: 726  TSVIGDIPDDLMKNSNVTTFGENSSFKFNFLIDTQNFPNGSNDISKAFFDNENQQMTVTS 785

Query: 1122 VIIAIQKSPKTPSQQPST 1175
            VIIAIQKSPKTPSQQPST
Sbjct: 786  VIIAIQKSPKTPSQQPST 803

 Score =  197 bits (501), Expect = 1e-48
 Identities = 102/126 (80%), Positives = 102/126 (80%)
 Frame = +2

Query: 173 NVYKGVDLGDELLEITSEEFQAYKNNFFANASDKKTVSALNYQFRKIXXXXXXXXXXXXX 352
           NVYKGVDLGDELLEITSEEFQAYKNNFFANASDKKTVSALNYQFRKI
Sbjct: 377 NVYKGVDLGDELLEITSEEFQAYKNNFFANASDKKTVSALNYQFRKIKNRESARRSRERK 436

Query: 353 XTHVDELXXXXXXXXXXRDNYKKENERLRMELDQYKLQEKQKSAGSIFDYISIGSPTTQN 532
            THVDEL          RDNYKKENERLRMELDQYKLQEKQKSAGSIFDYISIGSPTTQN
Sbjct: 437 ATHVDELEAKIAEIEKERDNYKKENERLRMELDQYKLQEKQKSAGSIFDYISIGSPTTQN 496

Query: 533 FSKNFG 550
           FSKNFG
Sbjct: 497 FSKNFG 502

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,721,626,437
Number of extensions: 25397394
Number of successful extensions: 67629
Number of sequences better than 10.0: 3
Number of HSP's gapped: 67592
Number of HSP's successfully gapped: 4
Length of query: 407
Length of database: 1,732,582,204
Length adjustment: 134
Effective length of query: 273
Effective length of database: 1,015,787,662
Effective search space: 277310031726
Effective search space used: 277310031726
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)




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