Homology VFO825 vs Protein
Query= VFO825 (VFO825Q) /CSM/VF/VFO8-B/VFO825Q.Seq.d/
(1223 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54WU0) RecName: Full=Probable basic-leucine zipper transcripti... 285 3e-75
CR533423_1(CR533423|pid:none) Paramecium tetraurelia, complete g... 36 3.9
CP002403_347(CP002403|pid:none) Ruminococcus albus 7, complete g... 35 8.7
>(Q54WU0) RecName: Full=Probable basic-leucine zipper transcription
factor C;
Length = 804
Score = 285 bits (730), Expect = 3e-75
Identities = 153/198 (77%), Positives = 153/198 (77%)
Frame = +3
Query: 582 ESIRNWATLPQNSVASLSFEKDNALKTIENANLDKSKHNVISXXXXXXXXXPSSDELMID 761
ESIRNWATLPQNSVASLSFEKDNALKTIENANLDKSKHNVIS PSSDELMID
Sbjct: 606 ESIRNWATLPQNSVASLSFEKDNALKTIENANLDKSKHNVISNLNQLQQQQPSSDELMID 665
Query: 762 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTTTTISPTRYVNNSTISLLVNP 941
Q STTTTISPTRYVNNSTISLLVNP
Sbjct: 666 QKEEKNCNNNNENNNNNDNNKNSDDEKGKEIEEIKRKSTTTTISPTRYVNNSTISLLVNP 725
Query: 942 TSVIGDIPDDLMKNSNVTTFGENSSFKFNFLIDTQNFPNGSNDISKAFFDNENQQMTVTS 1121
TSVIGDIPDDLMKNSNVTTFGENSSFKFNFLIDTQNFPNGSNDISKAFFDNENQQMTVTS
Sbjct: 726 TSVIGDIPDDLMKNSNVTTFGENSSFKFNFLIDTQNFPNGSNDISKAFFDNENQQMTVTS 785
Query: 1122 VIIAIQKSPKTPSQQPST 1175
VIIAIQKSPKTPSQQPST
Sbjct: 786 VIIAIQKSPKTPSQQPST 803
Score = 197 bits (501), Expect = 1e-48
Identities = 102/126 (80%), Positives = 102/126 (80%)
Frame = +2
Query: 173 NVYKGVDLGDELLEITSEEFQAYKNNFFANASDKKTVSALNYQFRKIXXXXXXXXXXXXX 352
NVYKGVDLGDELLEITSEEFQAYKNNFFANASDKKTVSALNYQFRKI
Sbjct: 377 NVYKGVDLGDELLEITSEEFQAYKNNFFANASDKKTVSALNYQFRKIKNRESARRSRERK 436
Query: 353 XTHVDELXXXXXXXXXXRDNYKKENERLRMELDQYKLQEKQKSAGSIFDYISIGSPTTQN 532
THVDEL RDNYKKENERLRMELDQYKLQEKQKSAGSIFDYISIGSPTTQN
Sbjct: 437 ATHVDELEAKIAEIEKERDNYKKENERLRMELDQYKLQEKQKSAGSIFDYISIGSPTTQN 496
Query: 533 FSKNFG 550
FSKNFG
Sbjct: 497 FSKNFG 502
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,721,626,437
Number of extensions: 25397394
Number of successful extensions: 67629
Number of sequences better than 10.0: 3
Number of HSP's gapped: 67592
Number of HSP's successfully gapped: 4
Length of query: 407
Length of database: 1,732,582,204
Length adjustment: 134
Effective length of query: 273
Effective length of database: 1,015,787,662
Effective search space: 277310031726
Effective search space used: 277310031726
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home