Homology VFO825 vs DNA
Query= VFO825 (VFO825Q) /CSM/VF/VFO8-B/VFO825Q.Seq.d/
(1223 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ436174) Dictyostelium discoideum cDNA clone:ddv30b08, 3' ... 601 0.0 2
(BJ345089) Dictyostelium discoideum cDNA clone:dda21g15, 3' ... 599 0.0 2
(C93725) Dictyostelium discoideum slug cDNA, clone SSL649. 593 0.0 5
(BJ441951) Dictyostelium discoideum cDNA clone:ddv48i08, 3' ... 252 e-179 3
(BJ379111) Dictyostelium discoideum cDNA clone:ddc33f20, 3' ... 504 e-163 3
(BJ417330) Dictyostelium discoideum cDNA clone:ddv30b08, 5' ... 254 e-159 4
(AU074715) Dictyostelium discoideum slug cDNA, clone SSL649. 311 3e-80 1
(BJ327735) Dictyostelium discoideum cDNA clone:dda21g15, 5' ... 178 1e-62 2
(BJ391076) Dictyostelium discoideum cDNA clone:dds15a01, 5' ... 101 6e-17 1
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 44 0.002 7
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 38 0.036 18
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 0.11 11
(U64830) Dictyostelium discoideum AX2 protein tyrosine kinas... 42 0.12 4
(AL445985) Human DNA sequence from clone RP11-45B20 on chrom... 50 0.20 1
(AY831786) Triticum aestivum clone TaE15025G11 low molecular... 38 0.29 2
(BJ365696) Dictyostelium discoideum cDNA clone:ddc36d12, 5' ... 38 0.30 3
(AC170582) Medicago truncatula chromosome 7 BAC clone mth2-5... 38 0.34 6
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 34 0.40 10
(DQ121078) Hucho taimen clone ZA-72 microsatellite sequence. 42 0.44 2
(AF241823) Dictyostelium discoideum prespore protein MF12 ge... 34 0.48 4
(DQ121080) Hucho taimen clone ZA-75a microsatellite sequence. 42 0.55 2
(AC229732) Medicago truncatula clone mth2-42o10, WORKING DRA... 40 0.56 5
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 34 0.60 8
(AU290707) Zinnia elegans cDNA, clone:Z5286, primer:M13 forw... 46 0.64 2
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 36 0.67 7
(C91010) Dictyostelium discoideum slug cDNA, clone SSJ565. 42 0.68 2
(EA239532) Sequence 103847 from patent US 7214786. 42 0.71 2
(BE427592) PSR7236 ITEC PSR Wheat Pericarp/Testa Library Tri... 42 0.71 2
(FD460894) LARVI24TR Haematobia irritans 1st Instar Larvae H... 40 0.73 3
(GF056803) pRRL2:Newb:20080411:62308 USMARC Pig Breed SNP Di... 48 0.81 1
(AC169662) Bos taurus clone CH240-203A24, WORKING DRAFT SEQU... 48 0.81 1
(AC166957) Bos taurus clone CH240-187H21, WORKING DRAFT SEQU... 48 0.81 1
(AL589677) Human DNA sequence from clone RP11-12P4 on chromo... 34 1.2 7
(AB183264) Dictyostelium discoideum amvA mRNA for GATA zinc ... 30 1.5 4
(EX537279) AIAC-aaa15b12.b1 Ancylostoma_caninum_EST_Male_pSM... 38 1.6 2
(B96633) T30O14TR TAMU Arabidopsis thaliana genomic clone T3... 38 1.8 2
(EX547518) AIAC-aaa15b12.g1 Ancylostoma_caninum_EST_Male_pSM... 38 1.9 2
(FE260441) CAZN964.fwd CAZN Naegleria gruberi Flagellate Sta... 32 2.2 2
(AU076395) Dictyostelium discoideum slug cDNA, clone SSI696. 36 2.5 2
(CU431637) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 42 3.0 2
(BX640477) Zebrafish DNA sequence from clone DKEY-43N16 in l... 46 3.2 1
(AC163719) Mus musculus BAC clone RP23-421M6 from chromosome... 46 3.2 1
(AC163342) Mus musculus BAC clone RP24-115M13 from chromosom... 46 3.2 1
(FB571361) Sequence 228 from Patent EP1865317. 46 3.2 1
(FB571305) Sequence 172 from Patent EP1865317. 46 3.2 1
(Z68160) Caenorhabditis elegans Cosmid D1046. 46 3.2 1
(AC102348) Mus musculus chromosome 9 clone RP23-264D11 map 9... 46 3.2 1
(CT827818) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.2 1
(EJ152956) 1092343780132 Global-Ocean-Sampling_GS-27-01-01-1... 46 3.2 1
(EJ105778) 1092343136678 Global-Ocean-Sampling_GS-27-01-01-1... 46 3.2 1
(CT165835) Sus scrofa genomic clone CH242-133B3, genomic sur... 46 3.2 1
(AG398441) Mus musculus molossinus DNA, clone:MSMg01-231L07.... 46 3.2 1
(EG757866) EST_ssal_sjb_6485 ssalsjb mixed_tissue Salmo sala... 38 3.4 2
(BJ392814) Dictyostelium discoideum cDNA clone:dds29e02, 5' ... 30 3.4 3
(AM759292) Clytia hemisphaerica EST, 5' end sequence, clone ... 42 3.4 2
(CR382398) Plasmodium falciparum chromosome 6, complete sequ... 34 3.6 8
(ES219101) MpGnorm_ag2_H06 Myzus persicae, tobacco lineage, ... 38 3.6 3
(CX977372) JGI_CAAP10203.rev NIH_XGC_tropInt1 Xenopus (Silur... 38 3.7 2
(FJ600493) Psathyrostachys huashanica isolate LG-Ns-1 clone ... 36 3.9 2
(CU556592) Spc_22YJ20 cDNA clone of Developmental Stages Lib... 38 4.1 2
(ES220541) MpGnorm_ag6_O12 Myzus persicae, tobacco lineage, ... 38 4.3 3
(EJ262585) 1095349050618 Global-Ocean-Sampling_GS-27-01-01-1... 32 4.3 3
(AC008075) Arabidopsis thaliana chromosome 1 BAC F24J5 seque... 38 4.6 5
(DD141719) NANOMACHINE COMPOSITIONS AND METHODS OF USE. 42 4.6 2
(CX874034) py225 PY Sporophyte cDNA Library Porphyra yezoens... 30 5.1 3
(FM992692) Candida dubliniensis CD36 chromosome 5, complete ... 38 5.3 13
(CP000013) Borrelia garinii PBi, complete genome. 32 5.3 2
(AC201329) Strongylocentrotus purpuratus clone R3-16M4, WORK... 44 5.5 4
(AC025896) Homo sapiens clone RP11-618A7, WORKING DRAFT SEQU... 40 5.9 7
(AC170670) Bos taurus clone CH240-228K16, WORKING DRAFT SEQU... 34 6.0 2
(AR551612) Sequence 6743 from patent US 6747137. 40 6.1 3
(CU469500) Zebrafish DNA sequence from clone CH73-368O6 in l... 34 6.1 2
(CU683892) Zebrafish DNA sequence from clone ZFOS-335G10 in ... 34 6.6 2
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 34 6.6 18
(EJ119201) 1092343365260 Global-Ocean-Sampling_GS-27-01-01-1... 32 7.2 3
(AC143340) Medicago truncatula clone mth2-7f4, complete sequ... 38 7.2 5
(U66913) Dictyostelium discoideum ORF DG1040 gene, partial cds. 32 7.4 4
(FJ600496) Dasypyrum villosum isolate VLG-1 clone 8-2 i-type... 38 7.8 2
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 32 8.3 9
(BF294055) WHE2161_F11_L20ZS Triticum turgidum L. var. durum... 36 8.3 2
(EI355464) GM_WBc0106H24.r GM_WBc Glycine max genomic clone ... 40 8.3 2
(BQ244613) TaE15040C01R TaE15 Triticum aestivum cDNA clone T... 36 8.4 2
(CD895462) G174.001O10F010514 G174 Triticum aestivum cDNA cl... 36 8.6 2
(AU269953) Dictyostelium discoideum vegetative cDNA clone:VS... 38 8.7 2
(BQ245862) TaE15019C07R TaE15 Triticum aestivum cDNA clone T... 36 8.7 2
(AY518220) Oryza sativa (indica cultivar-group) NBS-LRR-like... 38 8.8 3
(C25586) Dictyostelium discoideum slug cDNA, clone SSA219. 34 8.9 3
(BQ245920) TaE15018E04R TaE15 Triticum aestivum cDNA clone T... 36 9.4 2
(DE217010) Trifolium pratense DNA, clone:RCG07141. 40 9.5 2
(BM181884) fv51b11.y1 Sugano SJD adult male Danio rerio cDNA... 42 9.6 2
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 34 9.6 10
(DE410174) Bombyx mori genomic DNA, BAC clone:10J1A. 42 9.7 2
(BQ246934) TaE15003D10R TaE15 Triticum aestivum cDNA clone T... 36 9.8 2
>(BJ436174) Dictyostelium discoideum cDNA clone:ddv30b08, 3' end,
single read.
Length = 642
Score = 601 bits (303), Expect(2) = 0.0
Identities = 306/306 (100%)
Strand = Plus / Minus
Query: 874 caacaacaacaaccatttcaccaactcgttatgtaaataattcaactattagtttattag 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 caacaacaacaaccatttcaccaactcgttatgtaaataattcaactattagtttattag 291
Query: 934 ttaatccaacatcggtaattggtgatataccagatgatttgatgaaaaattcaaatgtta 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttaatccaacatcggtaattggtgatataccagatgatttgatgaaaaattcaaatgtta 231
Query: 994 ctacttttggtgaaaactcttctttcaagtttaatttcttgattgacactcaaaatttcc 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ctacttttggtgaaaactcttctttcaagtttaatttcttgattgacactcaaaatttcc 171
Query: 1054 caaatggttctaatgatatttcaaaagcattctttgataatgaaaatcaacaaatgactg 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 caaatggttctaatgatatttcaaaagcattctttgataatgaaaatcaacaaatgactg 111
Query: 1114 tcacctctgttattattgcaattcaaaaatcacctaaaactccttctcagcaaccatcaa 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tcacctctgttattattgcaattcaaaaatcacctaaaactccttctcagcaaccatcaa 51
Query: 1174 ccnaat 1179
||||||
Sbjct: 50 ccnaat 45
Score = 311 bits (157), Expect(2) = 0.0
Identities = 160/160 (100%)
Strand = Plus / Minus
Query: 583 aatcaattagaaattgggccactttaccacaaaatagtgttgcntctctttcttttgaaa 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aatcaattagaaattgggccactttaccacaaaatagtgttgcntctctttcttttgaaa 582
Query: 643 aagataacgctctcaaaacaattgaaaatgcaaatcttgataaatcaaaacataatgtca 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aagataacgctctcaaaacaattgaaaatgcaaatcttgataaatcaaaacataatgtca 522
Query: 703 tttcaaatttaaatcaacttcaacaacaacaaccatcatc 742
||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tttcaaatttaaatcaacttcaacaacaacaaccatcatc 482
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,155,747,573
Number of extensions: 84518295
Number of successful extensions: 9484987
Number of sequences better than 10.0: 95
Length of query: 1223
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1199
Effective length of database: 99,340,224,878
Effective search space: 119108929628722
Effective search space used: 119108929628722
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home