Dictyostelium discoideum cDNA Clone VFN362

Sequence VFN362

GTTAGTCACT TCTAAACAAC AATAACAATA TGAGTCATCG TAAATTTGAA
GCTCCACGTC ACGGTAATCT CGGTTTCAGA CCAAGAAAGA GAGCCGCCAG
ACATCAAGGT AAAGTCAAGT CATTCCCAAA GGATGACCGT ACCCAAAAAG
TCCACTTAAC TGCATTCATG GGTTACAAAG CTGGTATGAC TCACGTTGTC
AGAGATTTAG AAAAACCAGG TTCAAAGATG CACAAAAAAG AAATCGTTGA
AGCCGTCACC ATCATTGAAT GTCCACCAAT GTACATTGTT GGTTTAGTTG
GTTATGTTGA AACCGCTCAA GGTCTCAAAA CCTACAAAAC CGTCTGGGCT
CAACATTTAA GTGATAACTT CCGTAGAAGA TTATACAAAA ACTGGTACAA
ATCAAAATCA AAGAAAGCTT TCACCAAATA CGTTAAACAA TACGAAACTG
AAGAAGGTAA AAAATCAATT GAAGCCTCTC TCCAAGCCAT CAAAAAGAGA
TGTTCAGTCG TCCGTGTCAT TGCTCACACT CAAGTTCACA AATTAAAATT
AACTCAAAAG AAAGCACACG TCCTTGAAAT CCAAGTCAAT GGTGGTTCAA
TCGTCGAAAA AGTTAA---- ------TAAC TTTGCTGTTG CCAACTTTGA
AAAGACCGTC AACGTCACTG GTGTCTTTGC CGAAAATGAA TTAATCGATG
TTATCGGTGT AACCAAAGGT AAAGGTTTCA ATGGTGTCAT TAAAAGATGG
GGTGTCCGTA AATTACCAAG AAAGACCCAT AAAGGTTTAA GAAAGGTTGC
CTGTATTGGT GCATGGCATC CATCCCGTGT TAGTACCACC GTCCCAAGAG
CTGGTCAACT CGGTTACCAT CATCGTGTCG AAAGAAACAA GAAGATTTAC
AGAATCGGTC AAGCTCAACC AGAAGACGGT AAACAAATCT CAACCGGTAA
GACTGAATTC GATTTAACTG AAAAGACTAT CAATCCAATG GGTGGTTTCG
CTCACTACGG TATGGTTAAA CATGAATTCT TAATGCTTAA AGGTTGTGTT
GCTGGTCCAA GAAAGAGAGC CTTAACCTTA AGAAAGAGTA TCACCACTCA
AACTGGTCGT GCTGCCCTCG AGAAAATCAC TCTCAAATTC ATCGATACCT
CCAGCAAGTT TGGTCACGGT CTTCATCAAA CCGCTGAAGA TAAGACTAAA
TATTTCGGCG TCAAGAAATC AAGATCAACT AAGGCTTAAA TTCAATAAAT
TAGATTTCAG AGAGTTATCA AACAT

Translated Amino Acid Sequence VFN362

*SLLNNNNNMSHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKA
GMTHVVRDLEKPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLS
DNFRRRLYKNWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHK
LKLTQKKAHVLEIQVNGGSIVEKV---

---NFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKV
ACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKT
INPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSK
FGHGLHQTAEDKTKYFGVKKSRSTKA*iq*irfqrvikh

Homology VFN362 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFN362 (VFN362Q) /CSM/VF/VFN3-C/VFN362Q.Seq.d/                       2468   0.0
VFI645 (VFI645Q) /CSM/VF/VFI6-B/VFI645Q.Seq.d/                       1287   0.0
VFF813 (VFF813Q) /CSM/VF/VFF8-A/VFF813Q.Seq.d/                       1287   0.0
VFD735 (VFD735Q) /CSM/VF/VFD7-B/VFD735Q.Seq.d/                       1287   0.0
VFC683 (VFC683Q) /CSM/VF/VFC6-D/VFC683Q.Seq.d/                       1287   0.0
SLH858 (SLH858Q) /CSM/SL/SLH8-C/SLH858Q.Seq.d/                       1287   0.0
SLH735 (SLH735Q) /CSM/SL/SLH7-B/SLH735Q.Seq.d/                       1287   0.0
SLH567 (SLH567Q) /CSM/SL/SLH5-C/SLH567Q.Seq.d/                       1287   0.0
SLH448 (SLH448Q) /CSM/SL/SLH4-B/SLH448Q.Seq.d/                       1287   0.0
SLH434 (SLH434Q) /CSM/SL/SLH4-B/SLH434Q.Seq.d/                       1287   0.0

Homology VFN362 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU052239) Dictyostelium discoideum slug cDNA, clone SLA406.     1287   0.0    2
(AU052238) Dictyostelium discoideum slug cDNA, clone SLA404.     1287   0.0    2
(AU052190) Dictyostelium discoideum slug cDNA, clone SLA204.     1287   0.0    2
(AU040016) Dictyostelium discoideum slug cDNA, clone SLH448.     1287   0.0    2
(AU040010) Dictyostelium discoideum slug cDNA, clone SLH434.     1287   0.0    2
(AU039961) Dictyostelium discoideum slug cDNA, clone SLG843.     1287   0.0    2
(AU039914) Dictyostelium discoideum slug cDNA, clone SLG735.     1287   0.0    2
(AU039874) Dictyostelium discoideum slug cDNA, clone SLG632.     1287   0.0    1
(AU039555) Dictyostelium discoideum slug cDNA, clone SLE743.     1287   0.0    2
(AU039545) Dictyostelium discoideum slug cDNA, clone SLE726.     1287   0.0    2

Homology VFN362 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P34113) RecName: Full=60S ribosomal protein L3;  &JC4254(JC4254...   414   0.0
AM471157_1(AM471157|pid:none) Vitis vinifera contig VV78X211407....   288   e-147
EF144245_1(EF144245|pid:none) Populus trichocarpa clone PX0011_L...   286   e-147
DQ241849_1(DQ241849|pid:none) Solanum tuberosum clone 187E04 rib...   283   e-146
BC158279_1(BC158279|pid:none) Xenopus tropicalis hypothetical pr...   283   e-146
AM452874_1(AM452874|pid:none) Vitis vinifera contig VV78X187512....   283   e-146
EF146052_1(EF146052|pid:none) Populus trichocarpa clone WS0115_D...   286   e-146
AJ720292_1(AJ720292|pid:none) Gallus gallus mRNA for hypothetica...   283   e-145
EF145479_1(EF145479|pid:none) Populus trichocarpa clone WS01125_...   285   e-145
AC125473_1(AC125473|pid:none) Medicago truncatula clone mth2-8j1...   283   e-145

Homology VFN362 vs Genome