Dictyostelium discoideum cDNA Clone VFN308

Sequence VFN308

ATTATTATCT TTTTTCAAAA AAAAAANGTT ACATATATAT ACATAAAAAT
GATTTCAAAT ATTAGTAAAA AAATCCTTTC AAATTCATCA AAATTCATTC
AACAACAATC TTATTCCACA AAAAGAATTA AAGTAACAGG ACCAGTTGTT
GAAATGGATG GNGATGAACA AACTAGAATT ATGTGGGAAT CAATTAAATC
AAAATTAATT TTCCCATATG TTGATATTAC ACCAGAATAT TATGATTTAG
GTTTACCAAA TCGNGATGCA ACCAATGATC AAGTTACAAT TGATGCAGCC
AATGCAATTA ANAGAGCAAA GATTGGTGTT AAATGTGCAA CCATCACACC
GGATGAAGCA CGTGTAAAAG AGTTTGGATT AAAGGAGATG TGGAAATCAC
CAAACGGTNC CATTCGTAAT ATTTTGGATG GTNCAGTATT CAGAGGACCA
ATCATTTGTA AGAATTTACC ATTGTTAGTA CCAGGTTGGA AGAAACCAAT
CATCATTGGT CGTCATGCTC ATGGNGATCA ATACAAAGCC ACCGATTTCG
TTGTTAACGG TCCAGGTAAA TTAGAGATGA TTTTCACACC AAGTCAAGGC
GAGCCAATTA AAAA------ ----GTTCAG GTGTTGCAAT GGGTATGTAT
AATACAACTA GCTCAATCAC TGCTTTCGCT CATAGTTGTT TCCAATACGC
TATCGATAAA AAGTATCCAT TATATCTCTC CACAAAGAAC ACAATTCTCA
AGAAATACGA CGGGTCAATT CAAAGACATT TTCCAAGAGA TCTACGAAAG
AGAATACAGC ACTAAATTTG GTGAATTGGG TATTTGGTAT GAACATAGAC
TCATTGATGA TATGGTTGCT TTTGCACTCA AGAGTGAGGG TGGTTTCGTT
TGGGCTTGTA AAAACTATGA TGGTGATGTT CAATCAGATA TCGTCGCCCA
AGGTTATGGT AGTTTAGGTC TTATGACTTC AGTATTAACC AATGCTGATG
GAGTTTTCGC AAGTGAAGCC TCCCATGGTA CTGTCACTAG ACATTTCCGT
GAGCATCAAA AAGGTAATGA AACTAGTACC AATTCTGTTG CTTCCATTTT
CGCTTGGACA AGTGCACTTG GTCAACGTGG TAAATTAGAT AACAATAAAG
ATCTCGTTAA ATTCGCTCAA GATATGGAAA AAGCATGTGT TGAATCAATT
GAATCTGGTT TCATGACTAA AGATTTAGCA ATTTGTATCA AAGGAAACCA
AGTTAAAAGA TCAAATTACT TAAATACTGA AGAATATATT AACAAAGTTG
CTGAATTTTA TAATAAAATT AAATAAAAAT TTAAAATTTA AGTAAAATTA
ATAATAATAA TAATAATATC ATATATAAAT AGAAATAAAA ATTAAAAATT
TTAAAAAA

Translated Amino Acid Sequence VFN308

IIIFFQKKXVTYIYIKMISNISKKILSNSSKFIQQQSYSTKRIKVTGPVVEMDGDEQTRI
MWESIKSKLIFPYVDITPEYYDLGLPNRDATNDQVTIDAANAIXRAKIGVKCATITPDEA
RVKEFGLKEMWKSPNGXIRNILDGXVFRGPIICKNLPLLVPGWKKPIIIGRHAHGDQYKA
TDFVVNGPGKLEMIFTPSQGEPIK---

---VQVLQWVCIIQLAQSLLSLIVVSNTLSIKSIHYISPQRTQFSRNTTGQFKDIFQEIY
EREYSTKFGELGIWYEHRLIDDMVAFALKSEGGFVWACKNYDGDVQSDIVAQGYGSLGLM
TSVLTNADGVFASEASHGTVTRHFREHQKGNETSTNSVASIFAWTSALGQRGKLDNNKDL
VKFAQDMEKACVESIESGFMTKDLAICIKGNQVKRSNYLNTEEYINKVAEFYNKIK*kfk
i*vkliiiiiisyinrnkn*kf*k

Homology VFN308 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFN308 (VFN308Q) /CSM/VF/VFN3-A/VFN308Q.Seq.d/                       2393   0.0
VFF802 (VFF802Q) /CSM/VF/VFF8-A/VFF802Q.Seq.d/                       1318   0.0
VFH683 (VFH683Q) /CSM/VF/VFH6-D/VFH683Q.Seq.d/                       1310   0.0
VFM875 (VFM875Q) /CSM/VF/VFM8-D/VFM875Q.Seq.d/                       1308   0.0
VFC732 (VFC732Q) /CSM/VF/VFC7-B/VFC732Q.Seq.d/                       1285   0.0
VFK662 (VFK662Q) /CSM/VF/VFK6-C/VFK662Q.Seq.d/                       1211   0.0
VFI275 (VFI275Q) /CSM/VF/VFI2-D/VFI275Q.Seq.d/                       1199   0.0
VFF175 (VFF175Q) /CSM/VF/VFF1-D/VFF175Q.Seq.d/                       1179   0.0
VFE656 (VFE656Q) /CSM/VF/VFE6-C/VFE656Q.Seq.d/                       1152   0.0
VFE691 (VFE691Q) /CSM/VF/VFE6-D/VFE691Q.Seq.d/                       1132   0.0

Homology VFN308 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ435465) Dictyostelium discoideum cDNA clone:ddv27p01, 3' ...  1344   0.0    1
(BJ435332) Dictyostelium discoideum cDNA clone:ddv26f20, 3' ...  1308   0.0    1
(BJ434415) Dictyostelium discoideum cDNA clone:ddv16e22, 3' ...  1287   0.0    2
(BJ433684) Dictyostelium discoideum cDNA clone:ddv22k16, 3' ...  1211   0.0    1
(BJ429350) Dictyostelium discoideum cDNA clone:ddv3n06, 3' e...  1112   0.0    1
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...  1065   0.0    3
(BJ435878) Dictyostelium discoideum cDNA clone:ddv28d21, 3' ...  1065   0.0    2
(BJ430209) Dictyostelium discoideum cDNA clone:ddv6p07, 3' e...  1063   0.0    2
(BJ428462) Dictyostelium discoideum cDNA clone:ddv12d02, 3' ...  1061   0.0    2
(BJ428082) Dictyostelium discoideum cDNA clone:ddv10o14, 3' ...  1057   0.0    4

Homology VFN308 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q75JR2) RecName: Full=Isocitrate dehydrogenase [NADP], mitochon...   704   0.0
(Q75JR3) RecName: Full=Isocitrate dehydrogenase [NADP] cytoplasm...   499   e-139
AY551096_1(AY551096|pid:none) Crassostrea gigas isocitrate dehyd...   493   e-137
BT070673_1(BT070673|pid:none) Picea sitchensis clone WS02743_C22...   479   e-133
BX842656_132(BX842656|pid:none) Bdellovibrio bacteriovorus compl...   477   e-133
AB109115_1(AB109115|pid:none) Lupinus albus LaICDH2;1 mRNA for N...   475   e-132
EF085570_1(EF085570|pid:none) Picea sitchensis clone WS02811_B16...   474   e-132
AB019327_1(AB019327|pid:none) Daucus carota mRNA for NADP specif...   473   e-131
T04356(T04356) isocitrate dehydrogenase (NADP) (EC 1.1.1.42) pre...   473   e-131
AJ437269_1(AJ437269|pid:none) Cucumis sativus mRNA for isocitrat...   473   e-131

Homology VFN308 vs Genome