Dictyostelium discoideum cDNA Clone VFN289

Sequence VFN289

AAATTATAGG TCATCAATGG TATTGGAGTT ATGAATATGG AGATAATGCA
AGTAATTTAA TAGAATTTGA TAGTTATATG GTTTATGAAC GAGATTTAGC
AGAAGGACAA CTAAGATTAT TAGAAGTAGA TAATGCAATG GTAGTTCCAG
TAAAAACACA TATTAGATTA ATAATAACAT CAGGAGATGT TTTACATAGT
TGGGCGATTC CATCATTTGG AATAAAAGTA GATGCCGTAC CAGGACAATT
AAATCAAATT GGATTGTATG TAAAAAGAGA AGGTACATTC TATGGACAAT
GTAGTGAATT ATGTGGAGTA GATCATGGAT TTATGCCAAT TAAAGTTCAA
GCTGTTAAAT TAGGAGAGTA TTTTTCAAAA CTAAATGAAA AATAACATCA
ATAATAATAA AGTCCTAAAG GCAGCCGTCG ACCCATTCCT ATTACAAGCC
TTTGGATTTA CAGGATTGGG CGTAATGGGT GGCGTAATGG GTGTAATTAT
AGTTGTGGTT ACATTCAAGT ATGCGCTGGC ATCTTACGAG ATCCACGTAA
ATGTAATACA AAAGGGAACA CAAATGCTAT TAGAGGCGAC ATTAGGACAT
GAGGTAGGAG TAAAGAGAGA CGTATTTGAG AAAGTATTCG AATTATTTAA
AACGAGCCAA TTAAGCAATG GGCAGCAGGT AACGGCATTA AAGGCTTTAC
TGAATAACAT AATAGAATAC AGAGACACTC ATGCAATATC CGAATTGGAA
GGGAAAAAGC TACAACAAGT AGCGGATGAA CTAAGACGGT TATATGAGAG
GGAAGATCAA ATCGAAAAGG AAATAAATAA AATCTTAAGT AAGGCCTCTA
AAAGAGCAGG GGGAGGTTGG ATAAAAGAAG AATAATGAAA CAAAATTTAA
AAAAAACGGT TTTAAAAGCA GGATGGATAC CAGGAACGGA AACAGCTATT
GCAAAAATGG TTATAAGTAT TTGTGTTATC TTTGCAGGTT ATTATACATT
ATACTCTGCC TACGCAGAGT ATAACCAAAT TGTAGAACAA AATGCACAAG
CTGTTCTAAG CGAAGTAACA AGTAGTAATA TGCCCGTACC GCCATTAGAG
AGTTTAACTG ATATTTTAGT AGCATCTGAA AAATTATCTC CGCAAAGTAA
AGTAAATTTT TTATTAGAGC ATCAAACAAA GATAATCTCC TTACTAAAGG
TTACAGGGGG

Translated Amino Acid Sequence VFN289

kl*vingigvmnmeimqvi**nliviwfmnei*qkdn*dy*k*imqw*fq*khild***h
qemfyivgrfhhle*k*mpyqdn*ikldcm*kekvhsmdnvvnyve*imdlcqlkfklln
*esifqn*MKNNINNNKVLKAAVDPFLLQAFGFTGLGVMGGVMGVIIVVVTFKYALASYE
IHVNVIQKGTQMLLEATLGHEVGVKRDVFEKVFELFKTSQLSNGQQVTALKALLNNIIEY
RDTHAISELEGKKLQQVADELRRLYEREDQIEKEINKILSKASKRAGGGWIKEE**nki*
kkrf*kqdgyqerkqllqkwl*vfvlslqviihytlptqsitkl*nkmhklf*ak*qvvi
cpyrh*rv*lif**hlknylrkvk*ify*sikqr*spy*rlqg

Homology VFN289 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFN289 (VFN289Q) /CSM/VF/VFN2-D/VFN289Q.Seq.d/                       2351   0.0
MIT-GENOME (MIT-GENOMEQ) /CSM/OTHERS/MIT-GENOMEQ.Seq.d/              2212   0.0
VHB379 (VHB379Q) /CSM/VH/VHB3-D/VHB379Q.Seq.d/                       1518   0.0
VHD502 (VHD502Q) /CSM/VH/VHD5-A/VHD502Q.Seq.d/                       1283   0.0
CHQ235 (CHQ235Q) /CSM/CH/CHQ2-B/CHQ235Q.Seq.d/                       1136   0.0
VSK250 (VSK250Q) /CSM/VS/VSK2-C/VSK250Q.Seq.d/                       1021   0.0
VHF682 (VHF682Q) /CSM/VH/VHF6-D/VHF682Q.Seq.d/                        896   0.0
VSG767 (VSG767Q) /CSM/VS/VSG7-C/VSG767Q.Seq.d/                        698   0.0
VHP858 (VHP858Q) /CSM/VH/VHP8-C/VHP858Q.Seq.d/                        634   0.0
VHN576 (VHN576Q) /CSM/VH/VHN5-D/VHN576Q.Seq.d/                        587   e-166

Homology VFN289 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AB000109|AB000109.1 Dictyostelium discoideum mitochondrial D...  1326   0.0    8
D50297|D50297.1 Dictyostelium discoideum mitochondrial DNA f...   827   0.0    1
X81884|X81884.1 D.discoideum mitochondrial cox1 gene and cox...   805   0.0    1
AF196597|AF196597.1 Pythium insidiosum strain ATCC58643 cyto...    66   7e-26  5
AF196603|AF196603.1 Pythium iwagamai cytochrome c oxidase su...    82   3e-25  5
AF196596|AF196596.1 Pythium insidiosum strain ATCC28251 cyto...    66   3e-25  5
AF196625|AF196625.1 Pythium sylvaticum strain 1993-48 cytoch...    82   1e-24  4
AF196624|AF196624.1 Pythium sylvaticum strain ATCC96946 cyto...    82   1e-24  4
AF196623|AF196623.1 Pythium sylvaticum strain ATCC96937 cyto...    82   1e-24  4
AF196621|AF196621.1 Pythium sylvaticum strain ATCC18196 cyto...    82   1e-24  4

Homology VFN289 vs Protein

Sequences producing significant alignments:                      (bits) Value


X81884_2(X81884|pid:none) D.discoideum mitochondrial cox1 gene a...   270   2e-70
(O21042) RecName: Full=Cytochrome c oxidase subunit 1+2;        ...   270   2e-70
DQ336395_6(DQ336395|pid:none) Dictyostelium citrinum mitochondri...   247   8e-64
AY700145_35(AY700145|pid:none) Polysphondylium pallidum mitochon...   224   6e-57
EU275726_6(EU275726|pid:none) Polysphondylium pallidum strain PN...   222   3e-56
EU275727_7(EU275727|pid:none) Dictyostelium fasciculatum strain ...   221   8e-56
AF114794_21(AF114794|pid:none) Porphyra purpurea mitochondrion, ...   192   4e-47
AY534144_33(AY534144|pid:none) Saprolegnia ferax strain ATCC 360...   189   2e-46
AF288090_33(AF288090|pid:none) Rhodomonas salina mitochondrial D...   189   2e-46
GQ339576_27(GQ339576|pid:none) Helicosporidium sp. ex Simulium j...   189   3e-46

Homology VFN289 vs Genome