Dictyostelium discoideum cDNA Clone VFN222

Sequence VFN222

AATTGTCACC TGACTTACAT AAAAGAAAAT GAAATTACTT ATTTTAACTT
TATTTTTAGC TACTATTGTT TTAGCTCAAG CTTTAACAGT ACCATTAAAC
TTCCATCAAG CTTCAAGAGA ATCTAGAAGA AGAGTTCCAC AAAAATGGTC
AAACAGATTA TCTGCTCTCA ATGCTGGTAC CACAATCCCA ATTTCAGATT
TTGAAGATGC TCAATACTAT GGTGCCATTA CCATTGGTAC CCCAGGTCAA
GCCTTCAAAG TAGTTTTCGA TACTGGTTCA TCCAACTTGT GGATTCCATC
AAAGAAATGT CCAATCACTG TTGTTGCATG TGATTTACAT AACAAATATA
ACAGCGGTGC CTCAAGCACA TATGTCGCCA ACGGAACTGA TTTCACCATC
CAATACGGTA GTGGTGCTAT GTCAGGTTTT GTCTCTCAAG ATTCCGTCAC
TGTTGGTTCA TTAACTGTTA AAGATCAATT ATTCGCTGAA GCCACTGCCG
AACCAGGTAT TGCTTTCGAT TTCGCCAAAT TCGATGGTAT TTTAGGTCTT
GCTTTCCAAT CCATCTCTGT TAATTCAATT CCACCAGTCT TTTACAACAT
GTTATCACAA GGTTTAGTTT CATCAACACT CTTCTCCTTC TGGTTATCAA
GAACTCCAGG TGCCAACGGT GGTGAACTCT CATTCGGTTC AATCGATAAC
ACCAAATACA CTGGTGACAT TACCTACGTC CCATTAACCA ACGAAACCTA
TTGGGAATTC GTTATGGATG ACTTTGCTAT CGATGGTCAA TCAGCTGGTT
TCTGTGGTAC TACTTGTCAC GCAATTTGCG ATTCAGGTAC ATCACTCATT
GCTGGTCCAA TGGCTGATAT TACTGCCCTC AATGAAAAAT TAGGTGCTGT
CATCTTAAAT GGTGAAGGTG TCTTCTCTGA TTGTAGCGTT ATCAACACCT
TACCAAATGT TACCATCACC GTTGCTGGTC GTGAATTTGT TTTAACTCCA
AAAGAATACG TTTTAGAAGT TACTGAGTTC GGAAAGACTG AATGTTTGAG
TGGATTTATG GGTATCGAGT TAAACATGGG AAATTTCTGG ATCCTTGGTG
ATGTTTTCAT CTCTGCTTAC TATACTGTAT TCGATTTTGG TAATAAACAA
GTTGGTTTCG CAACTGCCAT TCAAGGTTAA ATTTTTTTAA TTAATTTATA
TTTAAGNATA GAAATAAAAC TAAATAA

Translated Amino Acid Sequence VFN222

ivt*lt*KKMKLLILTLFLATIVLAQALTVPLNFHQASRESRRRVPQKWSNRLSALNAGT
TIPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVACDLHNKYNSGA
SSTYVANGTDFTIQYGSGAMSGFVSQDSVTVGSLTVKDQLFAEATAEPGIAFDFAKFDGI
LGLAFQSISVNSIPPVFYNMLSQGLVSSTLFSFWLSRTPGANGGELSFGSIDNTKYTGDI
TYVPLTNETYWEFVMDDFAIDGQSAGFCGTTCHAICDSGTSLIAGPMADITALNEKLGAV
ILNGEGVFSDCSVINTLPNVTITVAGREFVLTPKEYVLEVTEFGKTECLSGFMGIELNMG
NFWILGDVFISAYYTVFDFGNKQVGFATAIQG*iflinlylxieikln

Homology VFN222 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFN222 (VFN222Q) /CSM/VF/VFN2-A/VFN222Q.Seq.d/                       2385   0.0
VFF495 (VFF495Q) /CSM/VF/VFF4-D/VFF495Q.Seq.d/                       2385   0.0
VFE162 (VFE162Q) /CSM/VF/VFE1-C/VFE162Q.Seq.d/                       2385   0.0
VFD841 (VFD841Q) /CSM/VF/VFD8-B/VFD841Q.Seq.d/                       2385   0.0
VFN467 (VFN467Q) /CSM/VF/VFN4-C/VFN467Q.Seq.d/                       2379   0.0
VFD535 (VFD535Q) /CSM/VF/VFD5-B/VFD535Q.Seq.d/                       2379   0.0
VFL385 (VFL385Q) /CSM/VF/VFL3-D/VFL385Q.Seq.d/                       2377   0.0
VFD884 (VFD884Q) /CSM/VF/VFD8-D/VFD884Q.Seq.d/                       2377   0.0
VFM519 (VFM519Q) /CSM/VF/VFM5-A/VFM519Q.Seq.d/                       2375   0.0
VFL410 (VFL410Q) /CSM/VF/VFL4-A/VFL410Q.Seq.d/                       2375   0.0

Homology VFN222 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(Y16962) Dictyostelium discoideum mRNA for cathepsin D.          2327   0.0    3
(AJ243946) Dictyostelium discoideum ctsD gene for cathepsin ...  2169   0.0    3
(BJ373040) Dictyostelium discoideum cDNA clone:ddc15p12, 3' ...  1479   0.0    2
(BJ345649) Dictyostelium discoideum cDNA clone:dda28i09, 3' ...  1473   0.0    1
(BJ435614) Dictyostelium discoideum cDNA clone:ddv27n14, 3' ...  1465   0.0    3
(BJ430801) Dictyostelium discoideum cDNA clone:ddv8h22, 3' e...  1465   0.0    2
(BJ430875) Dictyostelium discoideum cDNA clone:ddv9i06, 3' e...  1463   0.0    2
(BJ428690) Dictyostelium discoideum cDNA clone:ddv12j21, 3' ...  1463   0.0    2
(BJ400399) Dictyostelium discoideum cDNA clone:dds13i02, 3' ...  1463   0.0    2
(BJ435313) Dictyostelium discoideum cDNA clone:ddv26b22, 3' ...  1459   0.0    2

Homology VFN222 vs Protein

Sequences producing significant alignments:                      (bits) Value


HM989012_1(HM989012|pid:none) Pteria penguin cathepsin D mRNA, c...   382   e-104
HM989013_1(HM989013|pid:none) Pinctada maxima cathepsin D mRNA, ...   376   e-102
(Q03168) RecName: Full=Lysosomal aspartic protease;          EC=...   376   e-102
EF070454_1(EF070454|pid:none) Maconellicoccus hirsutus clone WHM...   376   e-102
EF213114_1(EF213114|pid:none) Penaeus monodon cathepsin D mRNA, ...   375   e-102
DQ010007_1(DQ010007|pid:none) Bombyx mori CathD mRNA, complete c...   375   e-102
BT080419_1(BT080419|pid:none) Caligus clemensi clone ccle-evs-50...   374   e-102
AB106552_1(AB106552|pid:none) Todarodes pacificus tpaD mRNA for ...   368   e-100
DQ909010_1(DQ909010|pid:none) Clonorchis sinensis aspartic prote...   368   e-100
JF720347_1(JF720347|pid:none) Fasciola gigantica cathepsin D mRN...   365   3e-99

Homology VFN222 vs Genome