Homology VFM870 vs Protein

Query= VFM870 (VFM870Q) /CSM/VF/VFM8-C/VFM870Q.Seq.d/
         (1460 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54KD5) RecName: Full=P17/29C-like protein DDB_G0287399; Flags:...   286   2e-75
(O77257) RecName: Full=Protein gp17; Flags: Precursor;  &Y17042_...   119   4e-25
(Q23911) RecName: Full=Protein 29C; Flags: Precursor;                 100   2e-19
AM270402_18(AM270402|pid:none) Aspergillus niger contig An18c010...    37   3.8

>(Q54KD5) RecName: Full=P17/29C-like protein DDB_G0287399; Flags:
            Precursor;
          Length = 486

 Score =  286 bits (733), Expect = 2e-75
 Identities = 149/171 (87%), Positives = 149/171 (87%)
 Frame = +1

Query: 907  NPSLTXXXXXXXXXXXXXXXXXXXXXXHPNGWTDVGQFLLGLAEGLVSTVASNTKLCFQS 1086
            NPSLT                      HPNGWTDVGQFLLGLAEGLVSTVASNTKLCFQS
Sbjct: 305  NPSLTGSSEYSSSSSGGGSGSHGGSSSHPNGWTDVGQFLLGLAEGLVSTVASNTKLCFQS 364

Query: 1087 VGSSITDFENAFQLIDSGFSRLSKPLIEQGLMDLGSGLLEVAIAFETCNVQNLASEIKAL 1266
            VGSSITDFENAFQLIDSGFSRLSKPLIEQGLMDLGSGLLEVAIAFETCNVQNLASEIKAL
Sbjct: 365  VGSSITDFENAFQLIDSGFSRLSKPLIEQGLMDLGSGLLEVAIAFETCNVQNLASEIKAL 424

Query: 1267 ATNIESGELGILEVIVKETINIFHNGNQLTTEFKLTISDYKSQNYLGMGYN 1419
            ATNIESGELGILEVIVKETINIFHNGNQLTTEFKLTISDYKSQNYLGMGYN
Sbjct: 425  ATNIESGELGILEVIVKETINIFHNGNQLTTEFKLTISDYKSQNYLGMGYN 475

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +2

Query: 56  LLFVGLILAFAVLSNAISIKNDGGVNPFD 142
           LLFVGLILAFAVLSNAISIKNDGGVNPFD
Sbjct: 7   LLFVGLILAFAVLSNAISIKNDGGVNPFD 35

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,134,119,200
Number of extensions: 33754239
Number of successful extensions: 79289
Number of sequences better than 10.0: 4
Number of HSP's gapped: 79234
Number of HSP's successfully gapped: 5
Length of query: 486
Length of database: 1,732,582,204
Length adjustment: 136
Effective length of query: 350
Effective length of database: 1,005,089,236
Effective search space: 351781232600
Effective search space used: 351781232600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)




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