Dictyostelium discoideum cDNA Clone VFM870

Sequence VFM870

AAACAATTTC ATCACATTAT AAATATAATA AAATAAAATG AAAATTAATA
TTATTTTATT ATTTGTTGGT TTGATTTTAG CTTTTGCAGT TTTATCAAAT
GCTATTTCTA TTAAAAATGA TGGTGGAGTA AATCCATTTG ATAATAATAA
TTCAGGAAGT GGAAGTGGTA GTGGTAGCGG TGGTGGATCA TCATCAAGTG
GGTCAGGAAC TGGTCAATCT TCAGGAACTG TTTCATCAAG TGGATCAGCT
TCAAATAATA CTAGTTCAGG TTCACAATCT GGTAATGCAT CATCAGGATC
ATCAAGTGGG TCATCAAGTG GATCATCAAG TGGATCATCA AGTGGATCAT
CATCAGGCTC ACAATCTGGT AATGCATCAT CAGGATCATC ATCATCAGGA
TCATCAGGTT CACAATCTGG TAATGCATCA TCAGGTACAT CAAGTGGATC
ATCATCATCA AGTGGATCAT CACAATCTGG TAATGCTTCA TCAGGCCCAT
CAAGTGGAAC AACTTCATCT TCAGGATCAT CACAATCTGA ATCATCACAA
TCTGGTAATG CTTCATCTGG TCCATCAAGT GGAACAACTT CATCTTCAGG
ATCATCACAA TCTGAATCAT CACAATCTGA ATCATCACAA TCTGGGTAGT
GCCTCATCTG GTCCATCAAG TGGGAACAAC TTCATCTTCA GGATCTTCAC
AATCTGATTC CTCATCTTTC ACTACTACCG GTTCTCAAGG ATCATCAGGA
TCATCAGGAT CATCACAATC TGATTCTTCA ---------- CAGATTCAAT
GAGTGGATCA GATTCAATGA GTGGATCAGA TTCAATGAGT GGATCATCAT
TTACAGGTGG AAATAGTGGT GGTAGTACAT CAACTGGTTC AGGTAGTTAT
TCAGGTAATC CATCATTAAC TGGTTCATCA GAATATAGTA GCAGTAGTAG
TGGTGGTGGT AGTGGTTCAC ATGGTGGTAG TAGTTCTCAC CCAAATGGTT
GGACCGATGT TGGTCAATTC CTTTTGGGTT TGGCAGAAGG TTTAGTTTCA
ACTGTTGCAT CAAATACTAA ACTTTGTTTC CAAAGTGTTG GTTCATCTAT
CACTGATTTC GAAAATGCAT TCCAATTAAT TGATTCAGGT TTTTCAAGAC
TTTCAAAACC ATTAATTGAA CAAGGTTTAA TGGATTTAGG TAGTGGTTTA
CTCGAAGTTG CTATTGCTTT TGAAACTTGT AATGTTCAAA ATCTCGCTAG
TGAAATTAAA GCACTTGCTA CAAATATAGA AAGTGGTGAA CTTGGTATCC
TCGAAGTAAT TGTCAAAGAA ACCATTAACA TTTTCCATAA TGGTAATCAA
CTTACCACTG AATTCAAATT AACAATCTCT GATTACAAGA GTCAAAATTA
CTTGGGTATG GGTTATAATA TTGGTGGTAT CGTCGGTATT TTACTTAAAG
NATTAAAATA

Translated Amino Acid Sequence VFM870

kqfhhiiniik*nen*yyfiicwfdfsfcsfikcyfy*k*wwsksi****frkwkw*w*r
wwiiikwvrnwsifrncfikwisfk*y*frftiw*ciiriikwvikwiikwiikwiiirl
tiw*ciiriiiiriirftiw*ciiryikwiiiikwiitiw*cfirpikwnnfifriiti*
iitiw*cfiwsikwnnfifriiti*iiti*IITIWVVPHLVHQVGTTSSSGSSQSDSSSF
TTTGSQGSSGSSGSSQSDSS---

---DSMSGSDSMSGSDSMSGSSFTGGNSGGSTSTGSGSYSGNPSLTGSSEYSSSSSGGGS
GSHGGSSSHPNGWTDVGQFLLGLAEGLVSTVASNTKLCFQSVGSSITDFENAFQLIDSGF
SRLSKPLIEQGLMDLGSGLLEVAIAFETCNVQNLASEIKALATNIESGELGILEVIVKET
INIFHNGNQLTTEFKLTISDYKSQNYLGMGYNIGGIVGILLKXLK

Homology VFM870 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFM870 (VFM870Q) /CSM/VF/VFM8-C/VFM870Q.Seq.d/                        938   0.0
SLG177 (SLG177Q) /CSM/SL/SLG1-D/SLG177Q.Seq.d/                        928   0.0
SLD303 (SLD303Q) /CSM/SL/SLD3-A/SLD303Q.Seq.d/                        928   0.0
VFN325 (VFN325Q) /CSM/VF/VFN3-B/VFN325Q.Seq.d/                        908   0.0
SSG591 (SSG591Q) /CSM/SS/SSG5-D/SSG591Q.Seq.d/                        886   0.0
VFI594 (VFI594Q) /CSM/VF/VFI5-D/VFI594Q.Seq.d/                        880   0.0
VFI345 (VFI345Q) /CSM/VF/VFI3-B/VFI345Q.Seq.d/                        864   0.0
CHD367 (CHD367Q) /CSM/CH/CHD3-C/CHD367Q.Seq.d/                        823   0.0
SFG266 (SFG266Q) /CSM/SF/SFG2-C/SFG266Q.Seq.d/                        799   0.0
VHB793 (VHB793Q) /CSM/VH/VHB7-D/VHB793Q.Seq.d/                         48   4e-04

Homology VFM870 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ435285) Dictyostelium discoideum cDNA clone:ddv26l18, 3' ...   938   0.0    2
(BJ435476) Dictyostelium discoideum cDNA clone:ddv27b07, 3' ...   906   0.0    2
(BJ432507) Dictyostelium discoideum cDNA clone:ddv18k23, 3' ...   783   0.0    3
(BJ432027) Dictyostelium discoideum cDNA clone:ddv17j11, 3' ...   783   0.0    4
(BJ376445) Dictyostelium discoideum cDNA clone:ddc28f17, 3' ...   823   0.0    2
(AU039683) Dictyostelium discoideum slug cDNA, clone SLG177.      924   0.0    2
(BJ400498) Dictyostelium discoideum cDNA clone:dds13c18, 3' ...   777   0.0    3
(C89896) Dictyostelium discoideum slug cDNA, clone SSG591.        924   0.0    2
(AU052429) Dictyostelium discoideum slug cDNA, clone SLD303.      924   0.0    1
(BJ416513) Dictyostelium discoideum cDNA clone:ddv26l18, 5' ...   444   0.0    4

Homology VFM870 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54KD5) RecName: Full=P17/29C-like protein DDB_G0287399; Flags:...   286   2e-75
(O77257) RecName: Full=Protein gp17; Flags: Precursor;  &Y17042_...   119   4e-25
(Q23911) RecName: Full=Protein 29C; Flags: Precursor;                 100   2e-19
AM270402_18(AM270402|pid:none) Aspergillus niger contig An18c010...    37   3.5

Homology VFM870 vs Genome