Dictyostelium discoideum cDNA Clone VFM808

Sequence VFM808

---------- TATTTATAAT ACACCAATTA CAGTACTTGA TGCAATGAAA
TCATCACCAA AAGAAGAGGA GATGATAACA GTTTCAGCAG AAATTCCAAC
CATTTTCTTT GCTGTAGAAT TGGAAGAATC TTTTAAAACT GCCAAAGAAA
AAGGTATTCC ACATCTTTTA AAAGTTTGCA TTGAATTCAT TTCAAGAAGA
AAAAATATTG AAGGAATCTT TAGGATTAGC GGATCAAAAT TTTTAATCGA
CGAAATTCAA TCAAAATTCG ATAAAGGTTT AATTACTTCA GTTGAAGATT
TAGATCCAAA TTGGATTTAT GAAGTTGCAT GTATTTTCAA ATCATATTTT
AGATATTTAC CTCATTCAGT TATTCCAGAT GAACAAATTA CAGAATTTTA
TAGAATTCAA AATAATATTA CAGATGCAAC TGAAAAAGCA GCAGCATTAA
AAGCAGTTGT TAATTCAATT CCAAATTTCC AATATACAAT TCTTTATGAA
TGTATATCTT TATTACATGA TATTTCATTA AACTCTAAAG AAAATTTAAT
GACTCCAAGT AATTTATCAA TTGTATATGG CCCTAGTTTA TTAAGACCAA
ATATTGAAAA AGGTGACATC CAAGAAATTG CAAATGCAAA TACTATTGTA
TTTAATTTAA TTTCATTCTT TCAACAAATT TTTATCAAAA ATCCTGATCC
TTCAATTTTA GAGATTGAAC ATCCAATTAC TCCAATTAAA CCAANATTCA
AAAATAATA

Translated Amino Acid Sequence VFM808

---IYNTPITVLDAMKSSPKEEEMITVSAEIPTIFFAVELEESFKTAKEKGIPHLLKVCI
EFISRRKNIEGIFRISGSKFLIDEIQSKFDKGLITSVEDLDPNWIYEVACIFKSYFRYLP
HSVIPDEQITEFYRIQNNITDATEKAAALKAVVNSIPNFQYTILYECISLLHDISLNSKE
NLMTPSNLSIVYGPSLLRPNIEKGDIQEIANANTIVFNLISFFQQIFIKNPDPSILEIEH
PITPIKPXFKNN

Homology VFM808 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFM808 (VFM808Q) /CSM/VF/VFM8-A/VFM808Q.Seq.d/                       1479   0.0
AFO490 (AFO490Q) /CSM/AF/AFO4-D/AFO490Q.Seq.d/                       1150   0.0
SSE288 (SSE288Q) /CSM/SS/SSE2-D/SSE288Q.Seq.d/                       1041   0.0
VSC242 (VSC242Q) /CSM/VS/VSC2-B/VSC242Q.Seq.d/                        894   0.0
SSF555 (SSF555Q) /CSM/SS/SSF5-C/SSF555Q.Seq.d/                        785   0.0
VHO791 (VHO791Q) /CSM/VH/VHO7-D/VHO791Q.Seq.d/                         38   0.19
CHF820 (CHF820Q) /CSM/CH/CHF8-A/CHF820Q.Seq.d/                         38   0.19
VHO671 (VHO671Q) /CSM/VH/VHO6-C/VHO671Q.Seq.d/                         36   0.75
VHK271 (VHK271Q) /CSM/VH/VHK2-C/VHK271Q.Seq.d/                         36   0.75
VHJ536 (VHJ536Q) /CSM/VH/VHJ5-B/VHJ536Q.Seq.d/                         36   0.75

Homology VFM808 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ435137) Dictyostelium discoideum cDNA clone:ddv26p02, 3' ...  1479   0.0    1
(BJ346007) Dictyostelium discoideum cDNA clone:dda29d24, 3' ...  1150   0.0    1
(AU037784) Dictyostelium discoideum slug cDNA, clone SSE288.     1031   0.0    1
(AU262425) Dictyostelium discoideum vegetative cDNA clone:VS...   884   0.0    1
(C84766) Dictyostelium discoideum slug cDNA, clone SSF555.        775   0.0    2
(AE017308) Mycoplasma mobile 163K complete genome.                 34   6e-05  18
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    36   0.002  19
(EJ624978) 1092963140511 Global-Ocean-Sampling_GS-29-01-01-1...    38   0.003  3
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    38   0.009  13
(AC180474) Strongylocentrotus purpuratus clone R3-3100E24, W...    42   0.014  3

Homology VFM808 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54PG5) RecName: Full=Rho GTPase-activating protein gacC; AltNa...   484   e-135
AF159851_1(AF159851|pid:none) Homo sapiens Rho GAP p190-A mRNA, ...    89   2e-16
BC035541_1(BC035541|pid:none) Mus musculus glucocorticoid recept...    89   3e-16
(Q91YM2) RecName: Full=Glucocorticoid receptor DNA-binding facto...    89   3e-16
BX005226_1(BX005226|pid:none) Zebrafish DNA sequence from clone ...    88   4e-16
BT072468_1(BT072468|pid:none) Salmo salar clone ssal-rgf-526-265...    88   4e-16
AK298356_1(AK298356|pid:none) Homo sapiens cDNA FLJ56603 complet...    88   5e-16
(Q9NRY4) RecName: Full=Glucocorticoid receptor DNA-binding facto...    88   5e-16
(P83509) RecName: Full=Glucocorticoid receptor DNA-binding facto...    88   5e-16
AB007925_1(AB007925|pid:none) Homo sapiens mRNA for KIAA0456 pro...    87   1e-15

Homology VFM808 vs Genome