Homology VFM557 vs Protein

Query= VFM557 (VFM557Q) /CSM/VF/VFM5-C/VFM557Q.Seq.d/
         (1169 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF421549_1(AF421549|pid:none) Gallus gallus CDH1-D mRNA, partial...    95   9e-18
BT055295_1(BT055295|pid:none) Zea mays full-length cDNA clone ZM...    62   8e-08
FP929128_286(FP929128|pid:none) Leptosphaeria maculans JN3 lm_Su...    61   1e-07
AM462492_6(AM462492|pid:none) Vitis vinifera contig VV78X177628....    60   2e-07
AB220473_1(AB220473|pid:none) Macaca fascicularis mRNA, clone Qf...    58   1e-06
CP003008_93(CP003008|pid:none) Myceliophthora thermophila ATCC 4...    47   9e-06
AY914930_1(AY914930|pid:none) Schistosoma japonicum SJCHGC01014 ...    53   4e-05
EU955514_1(EU955514|pid:none) Zea mays clone 1535262 hypothetica...    50   2e-04
AL844509_687(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    50   3e-04
FP929128_285(FP929128|pid:none) Leptosphaeria maculans JN3 lm_Su...    49   5e-04
AE014843_35(AE014843|pid:none) Plasmodium falciparum 3D7 chromos...    34   0.003
FQ311869_2(FQ311869|pid:none) Azospirillum lipoferum 4B plasmid ...    42   0.051
AM085146_9(AM085146|pid:none) Magnetospirillum gryphiswaldense m...    42   0.067
AB222159_1(AB222159|pid:none) Pan troglodytes verus actg1 mRNA f...    42   0.087
BT082605_1(BT082605|pid:none) Anoplopoma fimbria clone afim-evh-...    41   0.11
FN543107_181(FN543107|pid:none) Curvibacter putative symbiont of...    39   0.43
CP000890_242(CP000890|pid:none) Coxiella burnetii RSA 331, compl...    39   0.43
CP000930_2283(CP000930|pid:none) Heliobacterium modesticaldum Ic...    39   0.74
CP001087_1079(CP001087|pid:none) Desulfobacterium autotrophicum ...    38   1.3
FM179322_2504(FM179322|pid:none) Lactobacillus rhamnosus GG whol...    37   1.6
FM179322_816(FM179322|pid:none) Lactobacillus rhamnosus GG whole...    37   1.6
AP009386_1894(AP009386|pid:none) Burkholderia multivorans ATCC 1...    37   2.8
B72581(B72581)hypothetical protein APES063 - Aeropyrum pernix (s...    36   4.8
AY228468_281(AY228468|pid:none) Pinus koraiensis chloroplast, co...    36   4.8
CP002348_44(CP002348|pid:none) Calditerrivibrio nitroreducens DS...    35   6.2
DQ995340_1(DQ995340|pid:none) Saussurea involucrata antifreeze p...    35   6.2

>AF421549_1(AF421549|pid:none) Gallus gallus CDH1-D mRNA, partial cds.
          Length = 451

 Score = 94.7 bits (234), Expect = 9e-18
 Identities = 82/218 (37%), Positives = 97/218 (44%), Gaps = 8/218 (3%)
 Frame = -2

Query: 1057 NDPSAGSPTDTXXXXXXXLNNEI*IT---FNLYQCCHR*NDPLTLPYHSIGRSDGRCVQR 887
            NDPSAGSPT+T       L++++  +              DP T   H IG SDGRCVQR
Sbjct: 250  NDPSAGSPTETLLRLLLPLDSQVRPSSRRSGRAVADPAGADPRTSLNHPIGSSDGRCVQR 309

Query: 886  AGTYSA*GNDLRLQGIPRL*SIITKIKPSYVGNSNDYPILPDQEPFCFLH-----CSARA 722
            AGTYS    D  L GIPR   II    P +   S  YP LP +            CS R
Sbjct: 310  AGTYSTRAYDPHLLGIPRSWGIIAIPDPHHEWGSTGYPRLPAKGTHKLSQSVQRACSPRT 369

Query: 721  AQGI*GHHRPVIASDFRLLEAGSPSKKF*FVPIESDYTLLEAGDDRNHSKPQKSYRLYRL 542
            +Q   G  RPVIA   R+ E     K+    P+
Sbjct: 370  SQ---GRDRPVIAQS-RVAERHLSLKEVGRRPLGG------------------------- 400

Query: 541  INTTS*QVEVSSVIGIDQTNRSTN*ERPCTTTYRIMKD 428
               TS    VS VIGI+QTNRSTN ERPCTTT+ I K+
Sbjct: 401  -RVTSKHARVSFVIGINQTNRSTNKERPCTTTHGIEKE 437

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 3,497,945,891
Number of extensions: 74910393
Number of successful extensions: 170841
Number of sequences better than 10.0: 26
Number of HSP's gapped: 170825
Number of HSP's successfully gapped: 32
Length of query: 389
Length of database: 1,732,582,204
Length adjustment: 134
Effective length of query: 255
Effective length of database: 1,015,787,662
Effective search space: 259025853810
Effective search space used: 259025853810
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)