Dictyostelium discoideum cDNA Clone VFM545

Sequence VFM545

ACTGGAAAAA TTTATTTATC ACCAACACCT TCACCTTTTT TTTATACATT
AAACTAATAT AATTTGTAAT TTAATTAGTT TTAATTTTTT TTTTTTATAT
TTTTATTTCC TCATCAAANC AAAACAATNT NTAGCAAAAT AAAANGAGAG
AAATTGTCCA AATTCAAGCA GGTCAATGNG GTAATCAAAT TGGTTCCAAA
TTTTGGGAAG TAATTTNTGA ANAACACGGT NTCCAAAGCG ANGGTTTCCA
CNCT------ ----CAACCA AACTATGGTG ATTTAAATCA TCTCATCTCA
TCAGTTATGT CTGGTATCAC CTGTTGTCTT CGTTTCCCAG GTCAATTGAA
CTCTGATCTT CGTAAATTAG CTGTAAATTT AATTCCATTC CCACGTCTTC
ACTTCTTTTT GGTTGGTTTC GCTCCACTCA CTGCCAAAGG TGCCTCGTCA
TACAATCGTA TCACCGTACC AGAACTCACC CAACAAATGT TTGATGCCAA
GAATATGATG GCTGCTTCCG ATCCACACAA TGGTAAATAC TTGACTGCCT
CTGCTCTCTT TAGAGGTAAA ATCTTCACCA AGGAAGTCGA TGAACAAATG
CACAACATTC AAACCAAAAA TAGCAGTTAC TTTGTCGAAT GGATTCCACA
CAACATTAAA TCCTCCATTT GTGATATCCC ACCAAAAGGT ACCCCAATGG
CCGTCACCTT CATCGGTAAC AACACTGCCA TCCAAGATCT CTTCAAACGT
ATCTCAATTC ACTTCCAAGC TATGTTCCGT AGAAAGGCTT TCCTTCATTG
GTACACCCTC GAAGGTATGG AAGAATTGGA ATTTACTGAA GCTGAATCAA
ACATGAACGA TTTAGTTTAC GAATATCAAC AATATTCTAA CCAAGAAACG
AAGAAGATGG TGGTNAATAT CAAGAAGAAC ATGAAGAACA NAAGAACAAG
CNAAAATTAA AT

Translated Amino Acid Sequence VFM545

wknlfitntftfflyikli*fvi*lvlifffyifisssxqnnx*QNKXREIVQIQAGQXG
NQIGSKFWEVIXEXHGXQSXGFHX---

---QPNYGDLNHLISSVMSGITCCLRFPGQLNSDLRKLAVNLIPFPRLHFFLVGFAPLTA
KGASSYNRITVPELTQQMFDAKNMMAASDPHNGKYLTASALFRGKIFTKEVDEQMHNIQT
KNSSYFVEWIPHNIKSSICDIPPKGTPMAVTFIGNNTAIQDLFKRISIHFQAMFRRKAFL
HWYTLEGMEELEFTEAESNMNDLVYEYQQYSNQETKKMVVNIKKNMKNXRTSXN*

Homology VFM545 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFM545 (VFM545Q) /CSM/VF/VFM5-B/VFM545Q.Seq.d/                       1651   0.0
SFK751 (SFK751Q) /CSM/SF/SFK7-C/SFK751Q.Seq.d/                       1366   0.0
VFI534 (VFI534Q) /CSM/VF/VFI5-B/VFI534Q.Seq.d/                       1330   0.0
VFC748 (VFC748Q) /CSM/VF/VFC7-B/VFC748Q.Seq.d/                       1326   0.0
SFC259 (SFC259Q) /CSM/SF/SFC2-C/SFC259Q.Seq.d/                       1324   0.0
VFC612 (VFC612Q) /CSM/VF/VFC6-A/VFC612Q.Seq.d/                       1320   0.0
VFI185 (VFI185Q) /CSM/VF/VFI1-D/VFI185Q.Seq.d/                       1304   0.0
CFH427 (CFH427Q) /CSM/CF/CFH4-B/CFH427Q.Seq.d/                       1279   0.0
VFF673 (VFF673Q) /CSM/VF/VFF6-D/VFF673Q.Seq.d/                       1275   0.0
AFM680 (AFM680Q) /CSM/AF/AFM6-D/AFM680Q.Seq.d/                       1189   0.0

Homology VFM545 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(L14000) Dictyostelium discoideum beta tubulin (TUBB) mRNA, ...  1245   0.0    1
(AF030823) Dictyostelium discoideum beta tubulin gene, compl...  1245   0.0    1
(BJ435188) Dictyostelium discoideum cDNA clone:ddv26i11, 3' ...  1245   0.0    1
(BJ432290) Dictyostelium discoideum cDNA clone:ddv18c09, 3' ...  1245   0.0    1
(BJ430213) Dictyostelium discoideum cDNA clone:ddv6p11, 3' e...  1245   0.0    1
(BJ430096) Dictyostelium discoideum cDNA clone:ddv6g04, 3' e...  1245   0.0    1
(BJ401226) Dictyostelium discoideum cDNA clone:dds22f13, 3' ...  1245   0.0    1
(BJ373009) Dictyostelium discoideum cDNA clone:ddc15f08, 3' ...  1245   0.0    1
(BJ399344) Dictyostelium discoideum cDNA clone:dds5e16, 3' e...  1237   0.0    1
(BJ432160) Dictyostelium discoideum cDNA clone:ddv17i21, 3' ...  1231   0.0    1

Homology VFM545 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P32256) RecName: Full=Tubulin beta chain; AltName: Full=Beta-tu...   439   e-121
L14000_1(L14000|pid:none) Dictyostelium discoideum beta tubulin ...   439   e-121
A44848(A44848)beta 1A tubulin - slime mold (Physarum polycephalum)    363   1e-98
AF182554_1(AF182554|pid:none) Euglena gracilis beta-tubulin mRNA...   360   6e-98
AB576857_1(AB576857|pid:none) Tsukubamonas globosa mRNA for beta...   357   7e-97
(P41352) RecName: Full=Tubulin beta chain; AltName: Full=Beta-tu...   357   7e-97
(P34108) RecName: Full=Tubulin beta chain; AltName: Full=Beta-tu...   357   7e-97
S01769(S01769)tubulin beta-2 chain - Tetrahymena pyriformis           355   2e-96
X12769_1(X12769|pid:none) Tetrahymena pyriformis beta-tubulin ge...   355   2e-96
JQ0120(JQ0120) tubulin beta chain - malaria parasite (Plasmodium...   355   3e-96

Homology VFM545 vs Genome