Homology VFM512 vs DNA
Query= VFM512 (VFM512Q) /CSM/VF/VFM5-A/VFM512Q.Seq.d/
(1292 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ435102) Dictyostelium discoideum cDNA clone:ddv26g03, 3' ... 1267 0.0 1
(BJ400696) Dictyostelium discoideum cDNA clone:dds14j08, 3' ... 1267 0.0 2
(BJ429591) Dictyostelium discoideum cDNA clone:ddv4h02, 3' e... 1263 0.0 1
(BJ432177) Dictyostelium discoideum cDNA clone:ddv17m22, 3' ... 1261 0.0 2
(BJ416644) Dictyostelium discoideum cDNA clone:ddv26g03, 5' ... 1259 0.0 1
(BJ399230) Dictyostelium discoideum cDNA clone:dds4o22, 3' e... 1259 0.0 1
(BJ411930) Dictyostelium discoideum cDNA clone:ddv6i12, 5' e... 1229 0.0 1
(BJ430181) Dictyostelium discoideum cDNA clone:ddv6i12, 3' e... 1205 0.0 3
(BJ398440) Dictyostelium discoideum cDNA clone:dds12o12, 3' ... 1203 0.0 3
(BJ347105) Dictyostelium discoideum cDNA clone:dda26j02, 3' ... 1203 0.0 3
(BJ387124) Dictyostelium discoideum cDNA clone:dds12o12, 5' ... 1181 0.0 1
(BJ329742) Dictyostelium discoideum cDNA clone:dda26j02, 5' ... 1168 0.0 1
(BJ390947) Dictyostelium discoideum cDNA clone:dds14j08, 5' ... 1164 0.0 1
(BJ431309) Dictyostelium discoideum cDNA clone:ddv13o17, 3' ... 1158 0.0 2
(BJ387781) Dictyostelium discoideum cDNA clone:dds4o22, 5' e... 1152 0.0 1
(BJ371831) Dictyostelium discoideum cDNA clone:ddc1m15, 3' e... 1152 0.0 2
(BJ412982) Dictyostelium discoideum cDNA clone:ddv13o17, 5' ... 1150 0.0 1
(BJ362490) Dictyostelium discoideum cDNA clone:ddc22d01, 5' ... 1140 0.0 1
(BJ416999) Dictyostelium discoideum cDNA clone:ddv29f04, 5' ... 1114 0.0 1
(BJ373194) Dictyostelium discoideum cDNA clone:ddc1j23, 3' e... 1106 0.0 2
(BJ376572) Dictyostelium discoideum cDNA clone:ddc29i03, 3' ... 1102 0.0 2
(BJ358465) Dictyostelium discoideum cDNA clone:ddc1m15, 5' e... 1080 0.0 2
(BJ377269) Dictyostelium discoideum cDNA clone:ddc23d01, 3' ... 1078 0.0 1
(BJ401374) Dictyostelium discoideum cDNA clone:dds23d05, 3' ... 678 0.0 5
(BJ399221) Dictyostelium discoideum cDNA clone:dds4i20, 3' e... 1051 0.0 2
(BJ340482) Dictyostelium discoideum cDNA clone:dda2f07, 3' e... 1059 0.0 1
(BJ430860) Dictyostelium discoideum cDNA clone:ddv9g01, 3' e... 771 0.0 3
(BJ390237) Dictyostelium discoideum cDNA clone:dds21m14, 5' ... 906 0.0 1
(AU038509) Dictyostelium discoideum slug cDNA, clone SSH808. 694 0.0 3
(AU053504) Dictyostelium discoideum slug cDNA, clone SLI787. 722 0.0 2
(BJ387774) Dictyostelium discoideum cDNA clone:dds4i20, 5' e... 753 0.0 1
(BJ414058) Dictyostelium discoideum cDNA clone:ddv17m22, 5' ... 710 0.0 1
(BJ390605) Dictyostelium discoideum cDNA clone:dds23d05, 5' ... 618 0.0 2
(BJ412571) Dictyostelium discoideum cDNA clone:ddv9g01, 5' e... 698 0.0 1
(BJ325793) Dictyostelium discoideum cDNA clone:dda2f07, 5' e... 660 0.0 1
(AU271980) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 618 e-172 1
(AU271979) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 618 e-172 1
(AU053811) Dictyostelium discoideum slug cDNA, clone SLJ730. 468 e-137 2
(BJ358509) Dictyostelium discoideum cDNA clone:ddc1j23, 5' e... 482 e-131 1
(AU062263) Dictyostelium discoideum slug cDNA, clone SLI787. 446 e-120 1
(AU073676) Dictyostelium discoideum slug cDNA, clone SSH808. 442 e-119 1
(AU053579) Dictyostelium discoideum slug cDNA, clone SLJ149. 394 e-115 2
(BJ411359) Dictyostelium discoideum cDNA clone:ddv4h02, 5' e... 226 2e-54 1
(BJ401513) Dictyostelium discoideum cDNA clone:dds23d17, 3' ... 174 5e-39 1
(FC661820) CAXW2285.fwd CAXW Lottia gigantea from female gon... 52 2e-19 4
(EA391476) Sequence 40300 from patent US 7314974. 56 4e-08 2
(AM139592) Oryzias latipes EST, clone McF0020E02-MGRbd1. 60 2e-04 1
(U17110) Clostridium acetobutylicum crotonase (crt), putativ... 48 3e-04 4
(DT343130) JGI_CAAX8056.fwd CAAX Pimephales promelas testis ... 48 3e-04 3
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 40 6e-04 2
(DT183819) JGI_ANNO49825.fwd ANNO Pimephales promelas Whole ... 46 9e-04 3
(DT264902) JGI_CAAU13372.fwd CAAU Pimephales promelas brain ... 46 0.001 3
(DT344183) JGI_CAAX8658.fwd CAAX Pimephales promelas testis ... 46 0.001 3
(CV454960) EST908869 BEA Rhipicephalus microplus cDNA clone ... 52 0.001 2
(CK176372) EST765692 BEA Rhipicephalus microplus cDNA clone ... 52 0.001 2
(DV997201) GQ027123.B3_C10 GQ099: Mixed spruce tissues Picea... 46 0.001 2
(CO479968) GQ01813.T24_D08 GQ018: Clean ROOTS systems - N tr... 46 0.001 2
(DV988271) GQ02014.TB_E24 GQ020: Clean ROOTS systems -Diurna... 46 0.002 2
(GE480565) GQ02014.B3.r_E24 GQ020: Clean ROOTS systems -Diur... 46 0.002 2
(GM665887) Sequence 8 from Patent WO2008074794. 48 0.002 3
(GM040823) Sequence 8 from Patent WO2008052991. 48 0.002 3
(FE347097) CBIB7007.rev CBIB_Daphnia_pulex_Chosen_One_Librar... 38 0.003 2
(FE375040) CBNP4591.rev CBNP_Daphnia_pulex_Chosen_One_Librar... 38 0.003 2
(EJ715747) 1092959415142 Global-Ocean-Sampling_GS-30-02-01-1... 56 0.003 1
(EJ689820) 1092955410440 Global-Ocean-Sampling_GS-30-02-01-1... 56 0.003 1
(EL558940) EST_otsh_rgd_1380 otshrgd mixed_tissue Oncorhynch... 56 0.003 1
(BX866308) AGENAE Rainbow trout multi-tissues - normalized +... 56 0.003 1
(EV379629) EST_oner_rge_729565 onerrge mixed_tissue Oncorhyn... 56 0.003 1
(EV378880) EST_oner_rge_728741 onerrge mixed_tissue Oncorhyn... 56 0.003 1
(AE017194) Bacillus cereus ATCC 10987, complete genome. 56 0.003 1
(DW578515) EST_ssal_rgb2_42934 rgb2 Salmo salar cDNA clone s... 54 0.014 1
(CP000817) Lysinibacillus sphaericus C3-41, complete genome. 54 0.014 1
(DT302768) JGI_CAAW11658.fwd CAAW Pimephales promelas testis... 46 0.019 2
(FE295982) CANN838.fwd CANN_Daphnia_pulex_Log50_Library_17 D... 52 0.055 1
(EW933530) G894P5183RI2.T0 Ixodes scapularis Pooled Non-infe... 52 0.055 1
(EW922827) G894P5165RF21.T0 Ixodes scapularis Pooled Non-inf... 52 0.055 1
(EW917187) G894P5157RE2.T0 Ixodes scapularis Pooled Non-infe... 52 0.055 1
(EW899779) G894P5132RD9.T0 Ixodes scapularis Pooled Non-infe... 52 0.055 1
(EW885317) G894P553FD3.T0 Ixodes scapularis Pooled Non-infec... 52 0.055 1
(EW884274) G894P551RK14.T0 Ixodes scapularis Pooled Non-infe... 52 0.055 1
(EW872773) G894P530RD10.T0 Ixodes scapularis Pooled Non-infe... 52 0.055 1
(EW868622) G894P525RE9.T0 Ixodes scapularis Pooled Non-infec... 52 0.055 1
(EW853606) G894P5118RI1.T0 Ixodes scapularis Pooled Non-infe... 52 0.055 1
(EW838349) G894P596RI18.T0 Ixodes scapularis Pooled Non-infe... 52 0.055 1
(EW835317) G894P591RB6.T0 Ixodes scapularis Pooled Non-infec... 52 0.055 1
(EW830807) G894P581RI13.T0 Ixodes scapularis Pooled Non-infe... 52 0.055 1
(EW797192) G893P528RO1.T0 Ixodes scapularis Pooled Non-infec... 52 0.055 1
(EA391312) Sequence 40136 from patent US 7314974. 34 0.088 3
(EA385322) Sequence 34146 from patent US 7314974. 40 0.088 3
(DT250012) JGI_CAAU4025.fwd CAAU Pimephales promelas brain 7... 38 0.18 3
(CR682236) Tetraodon nigroviridis full-length cDNA. 50 0.22 1
(AL331969) Tetraodon nigroviridis genome survey sequence T3 ... 50 0.22 1
(CP000903) Bacillus weihenstephanensis KBAB4, complete genome. 50 0.22 1
(BA000028) Oceanobacillus iheyensis HTE831 DNA, complete gen... 50 0.22 1
(DR050226) RTBOR1_22_C10.b1_A029 Roots plus added boron Pinu... 38 0.22 2
(DR098256) STRR1_40_E03.b1_A033 Stem Response Resistant Pinu... 38 0.24 2
(FK904892) EST_lsal_evj_948480 lsalevj mixed_tissue_mixed_st... 40 0.26 2
(ES258663) WS0377.C21_M10 SS-B-N-22 Picea sitchensis cDNA cl... 46 0.29 2
(AE015927) Clostridium tetani E88, complete genome. 36 0.40 2
(EF520328) Pseudo-nitzschia galaxiae strain CLA1.D5 PsbC (ps... 48 0.85 1
(EF520327) Pseudo-nitzschia galaxiae strain MOZ06 PsbC (psbC... 48 0.85 1
(EF520326) Pseudo-nitzschia galaxiae strain FB06 PsbC (psbC)... 48 0.85 1
(EF520316) Pseudo-nitzschia pseudodelicatissima strain AL20 ... 48 0.85 1
(EF520315) Pseudo-nitzschia cuspidata strain AL28 PsbC (psbC... 48 0.85 1
(EF520314) Pseudo-nitzschia fraudulenta strain BB19 PsbC (ps... 48 0.85 1
(EF520313) Pseudo-nitzschia fraudulenta strain AL50 PsbC (ps... 48 0.85 1
(AC117441) Homo sapiens 3 BAC RP11-803L18 (Roswell Park Canc... 48 0.85 1
(AC225655) Muntiacus muntjak vaginalis clone CH244-320B4, WO... 48 0.85 1
(ER728069) SB_BBc204-L09.R SB_BBc Sorghum bicolor genomic 3'... 48 0.85 1
(ED675262) GM_WBb0005J18.r GM_WBb Glycine max genomic clone ... 48 0.85 1
(CZ500303) GMW2-5J18a.g1 GMW2 Glycine max genomic, genomic s... 48 0.85 1
(EG834801) EST_ssal_eve_46614 ssaleve thyroid Salmo salar cD... 48 0.85 1
(CA347210) 678289 NCCCWA 1RT Oncorhynchus mykiss cDNA clone ... 48 0.85 1
(CP001186) Bacillus cereus G9842, complete genome. 48 0.85 1
(CP001010) Polynucleobacter necessarius subsp. necessarius S... 48 0.85 1
(CP000485) Bacillus thuringiensis str. Al Hakam, complete ge... 48 0.85 1
(CP000001) Bacillus cereus E33L, complete genome. 48 0.85 1
(AE017355) Bacillus thuringiensis serovar konkukian str. 97-... 48 0.85 1
(AE001437) Clostridium acetobutylicum ATCC 824, complete gen... 48 0.85 1
(EK158330) 1095458014070 Global-Ocean-Sampling_GS-31-01-01-1... 34 2.1 3
(CK025118) AGENCOURT_16619117 NIH_ZGC_10 Danio rerio cDNA cl... 38 3.3 2
(AC187604) Pan troglodytes BAC clone CH251-739K24 from chrom... 46 3.4 1
(AC146346) Pan troglodytes clone rp43-26h17, complete sequence. 46 3.4 1
(AC146049) Pan troglodytes BAC clone RP43-72L7 from chromoso... 46 3.4 1
(AL049536) Human DNA sequence from clone RP1-205F14P on chro... 46 3.4 1
(AC024293) Homo sapiens chromosome 11, clone RP11-425L10, co... 46 3.4 1
(AC158509) Pan troglodytes clone rp43-71i19, WORKING DRAFT S... 46 3.4 1
(AC156318) Bos taurus clone CH240-51F24, WORKING DRAFT SEQUE... 46 3.4 1
(AC148411) Otolemur garnettii clone CH256-154D24, WORKING DR... 46 3.4 1
(AC146137) Pan troglodytes chromosome UNK clone RP43-37P5, *... 46 3.4 1
(ER675867) SB_BBc77-O02.R SB_BBc Sorghum bicolor genomic 3',... 46 3.4 1
(EK251346) 1095460281493 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.4 1
(AM337094) Oryzias latipes EST, clone FOE002-P00115-DPE-F_E02. 46 3.4 1
(BE886020) 601507149F1 NIH_MGC_71 Homo sapiens cDNA clone IM... 46 3.4 1
(FG301839) MPOA278TR B. bovis infected B. microplus Ovary 40... 46 3.4 1
(FE350756) CBIC10105.rev CBIC_Daphnia_pulex_Chosen_One_Libra... 46 3.4 1
(CR543861) Acinetobacter sp. ADP1 complete genome. 46 3.4 1
(CF998182) AGENCOURT_16393543 NIH_ZGC_7 Danio rerio cDNA clo... 38 3.5 2
(CK688093) ZF101-P00045-DEPE-F2_I03 GISZF001_ra Danio rerio ... 38 3.6 2
(DN770688) AGENCOURT_48360542 NIH_ZGC_16 Danio rerio cDNA cl... 38 3.6 2
(CO802612) AGENCOURT_30340761 NIH_ZGC_14 Danio rerio cDNA cl... 38 3.7 2
(EH439027) FDR103-P00021-DEPE-F_G11 FDR103 Danio rerio cDNA ... 38 3.7 2
(EH589656) FDR306-P00031-DEPE-F_G23 FDR306 Danio rerio cDNA ... 38 3.8 2
(EE314071) AGENCOURT_85422488 NIH_ZGC_28 Danio rerio cDNA cl... 38 3.8 2
(EA391477) Sequence 40301 from patent US 7314974. 40 3.8 3
(CN170023) AGENCOURT_21021653 NIH_ZGC_8 Danio rerio cDNA clo... 38 3.9 2
(EH432300) FDR103-P00002-DEPE-F_H13 FDR103 Danio rerio cDNA ... 38 3.9 2
(EE710999) AGENCOURT_90002972 NIH_ZGC_29 Danio rerio cDNA cl... 38 3.9 2
(AC178322) Strongylocentrotus purpuratus clone R3-3101N18, W... 40 3.9 5
(EJ977721) 1093022130799 Global-Ocean-Sampling_GS-30-02-01-1... 44 4.0 2
(CN015419) AGENCOURT_20807644 NIH_ZGC_17 Danio rerio cDNA cl... 38 4.0 2
(EH436749) FDR103-P00015-DEPE-F_A02 FDR103 Danio rerio cDNA ... 38 4.1 2
(CP000737) Staphylococcus aureus subsp. aureus JH1 plasmid p... 38 4.1 4
(EJ943167) 1093018898218 Global-Ocean-Sampling_GS-30-02-01-1... 44 4.2 2
(EH547415) FDR202-P00031-DEPE-F_O12 FDR202 Danio rerio cDNA ... 38 4.3 2
(EH548038) FDR202-P00033-DEPE-F_J18 FDR202 Danio rerio cDNA ... 38 4.3 2
(EH554265) FDR202-P00050-DEPE-F_H23 FDR202 Danio rerio cDNA ... 38 4.4 2
(EH496929) FDR107-P00037-DEPE-F_I21 FDR107 Danio rerio cDNA ... 38 4.4 2
(CT962510) Zebrafish DNA sequence from clone CH73-170D1 in l... 34 4.8 4
(BC044203) Danio rerio acyl-Coenzyme A dehydrogenase family,... 38 7.0 2
(BC066503) Danio rerio acyl-Coenzyme A dehydrogenase family,... 38 7.7 2
(EJ174851) 1092344096879 Global-Ocean-Sampling_GS-27-01-01-1... 32 8.4 2
(EC679561) ELE00010662 High light non-normalized long fracti... 34 8.5 2
(AC182067) Bos taurus clone CH240-512E2, WORKING DRAFT SEQUE... 38 9.2 6
>(BJ435102) Dictyostelium discoideum cDNA clone:ddv26g03, 3' end,
single read.
Length = 639
Score = 1267 bits (639), Expect = 0.0
Identities = 639/639 (100%)
Strand = Plus / Minus
Query: 654 tcatggtcagaacgggcgcggagaagggaccaaaggggatctcctgtctcttggtggaga 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tcatggtcagaacgggcgcggagaagggaccaaaggggatctcctgtctcttggtggaga 580
Query: 714 aggacaccccaggccttagcttcggcaaaaaggaggagaaactaggctggaacacccaac 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aggacaccccaggccttagcttcggcaaaaaggaggagaaactaggctggaacacccaac 520
Query: 774 caactcgtgcattgattttcgaagattgtcgtgtaccagttggcaatttaattggcaaag 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 caactcgtgcattgattttcgaagattgtcgtgtaccagttggcaatttaattggcaaag 460
Query: 834 agggtcaaggcttttccattgctatgaacgctttaaacggcggtcgtatcaacattggtg 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agggtcaaggcttttccattgctatgaacgctttaaacggcggtcgtatcaacattggtg 400
Query: 894 cttgtagtttgggtggggcccaatcttgtttggtggccgctagagatcatgttaaagtta 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cttgtagtttgggtggggcccaatcttgtttggtggccgctagagatcatgttaaagtta 340
Query: 954 gaaaacaattcaatcaaccattggaacatttccaagccgttcaatttaaaatggcagata 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gaaaacaattcaatcaaccattggaacatttccaagccgttcaatttaaaatggcagata 280
Query: 1014 tggccactaaattacatgcatctcgtattatgattagaaatgccgctgcaatgttggatg 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tggccactaaattacatgcatctcgtattatgattagaaatgccgctgcaatgttggatg 220
Query: 1074 caaaagatccatctgctcatgtttacattgcaatggcaaaattatttgcttgtgatgaat 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 caaaagatccatctgctcatgtttacattgcaatggcaaaattatttgcttgtgatgaat 160
Query: 1134 gtttcaaagttaccgatgattcacttcaattatttggtggttatggttatcttaaagatt 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gtttcaaagttaccgatgattcacttcaattatttggtggttatggttatcttaaagatt 100
Query: 1194 atccagttgaaagatatttacgtgatcttcgtgttcatcgtattttggaaggttctgatg 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atccagttgaaagatatttacgtgatcttcgtgttcatcgtattttggaaggttctgatg 40
Query: 1254 ctgttatgagataatcatttcaagagaattaagtaaaga 1292
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 ctgttatgagataatcatttcaagagaattaagtaaaga 1
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,487,064,926
Number of extensions: 84062667
Number of successful extensions: 6522603
Number of sequences better than 10.0: 164
Length of query: 1292
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1268
Effective length of database: 99,340,224,878
Effective search space: 125963405145304
Effective search space used: 125963405145304
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home