Dictyostelium discoideum cDNA Clone VFM284

Sequence VFM284

CACTGTTGGC CTACTGGCAA TTTTTGTAAA AATTGTGGGA TATTATTTAA
TTAAAGATGG ACGCATCGTC AACAACAATA AATGAACCAA AAGATATTGA
TATGACAGAA ACAACAAAAT CACCACATAA AACAACAACT ACAACTACAA
CTACAACAAC AACAACAAAT ACAAATACAG ATAAAGCAAC AATTGAATTG
GATGAATTAG ATGAATATGA AGAAGAGAAA ATACCACCAC CACCAAAAAC
CAAAGTAATA ATAAATGGAG TTGAAGAAGA GGAAGAAGAA GAAGATTATG
TTATACATGA AATACCAGTT TATTTATCAC AATCATTATC AGATTATTTA
TATTTATTTC AATATCCATT AAGACAACCA TGGAGACCTT ATGATATGAG
TAAATTGGAA GAACTTAGAA TTAAACCAAA GCAACAAAAA GTTGAAATGG
ATTTATCAAT TGATCC---- ------GNCA TTCAATATTT GGATTTCCAA
GAATTCCAAG TAATTATCGT GAAGGTAACA CTGTTGAACA TCAATTACTC
TTCCTTTTAT ACAATTTCTT TAAACAACAA GGTGTTTGTT CAATTGAACT
CATTAAGACA ATATATAGCA TCACAAAGAG ATTTAAAAAC TGAAAATAAT
TTATTAAATC AAGTTAATGA TAAAATGGTT GATGAACAAT TAAAGAAAAT
GGCAACAATA GTTCGTTATA GTTATGTTTT AAAAACAACT GGTAATCAAA
AAGTTGATAA ATATCGTGAT ATTATTTTAG AAGCATTTAA TAAGAGTGGT
GGTTTAAAGA AAGATGATAT TATAAATTTA TTAAGAGAAA AAATGGATAC
AAATTATGTT GAAATACCTC AAAATATTTT CATTCAAGTT TTAACTGAAT
TAGCTGAAGC TAAAGGTAAA GTTTGGGTTT TAAA

Translated Amino Acid Sequence VFM284

llaywqfl*klwdii*LKMDASSTTINEPKDIDMTETTKSPHKTTTTTTTTTTTTNTNTD
KATIELDELDEYEEEKIPPPPKTKVIINGVEEEEEEEDYVIHEIPVYLSQSLSDYLYLFQ
YPLRQPWRPYDMSKLEELRIKPKQQKVEMDLSID---

---XIQYLDFQEFQVIIVKVTLLNINYSSFYTISLNNKVFVQLNSLRQYIASQRDLKTEN
NLLNQVNDKMVDEQLKKMATIVRYSYVLKTTGNQKVDKYRDIILEAFNKSGGLKKDDIIN
LLREKMDTNYVEIPQNIFIQVLTELAEAKGKVWVL

Homology VFM284 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFM284 (VFM284Q) /CSM/VF/VFM2-D/VFM284Q.Seq.d/                       1201   0.0
CHL425 (CHL425Q) /CSM/CH/CHL4-B/CHL425Q.Seq.d/                        860   0.0
SFB613 (SFB613Q) /CSM/SF/SFB6-A/SFB613Q.Seq.d/                        773   0.0
CHJ160 (CHJ160Q) /CSM/CH/CHJ1-C/CHJ160Q.Seq.d/                        628   e-179
VHH277 (VHH277Q) /CSM/VH/VHH2-D/VHH277Q.Seq.d/                        339   5e-92
SFI390 (SFI390Q) /CSM/SF/SFI3-D/SFI390Q.Seq.d/                         48   2e-04
AFO239 (AFO239Q) /CSM/AF/AFO2-B/AFO239Q.Seq.d/                         48   2e-04
VFH723 (VFH723Q) /CSM/VF/VFH7-A/VFH723Q.Seq.d/                         42   0.015
VFE580 (VFE580Q) /CSM/VF/VFE5-D/VFE580Q.Seq.d/                         42   0.015
SHJ571 (SHJ571Q) /CSM/SH/SHJ5-C/SHJ571Q.Seq.d/                         42   0.015

Homology VFM284 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...   339   0.0    6
(BJ435028) Dictyostelium discoideum cDNA clone:ddv25g22, 3' ...   904   0.0    1
(BJ382283) Dictyostelium discoideum cDNA clone:ddc44b08, 3' ...   628   0.0    2
(BJ399095) Dictyostelium discoideum cDNA clone:dds4i04, 3' e...   555   0.0    2
(BJ416332) Dictyostelium discoideum cDNA clone:ddv25g22, 5' ...   339   0.0    3
(BJ381159) Dictyostelium discoideum cDNA clone:ddc40g15, 3' ...   402   e-173  2
(BJ422416) Dictyostelium discoideum cDNA clone:ddv45i20, 5' ...   339   e-171  3
(BJ367784) Dictyostelium discoideum cDNA clone:ddc44b08, 5' ...   339   e-169  3
(BJ366878) Dictyostelium discoideum cDNA clone:ddc40g15, 5' ...   339   e-164  3
(BJ387667) Dictyostelium discoideum cDNA clone:dds4i04, 5' e...   170   e-130  4

Homology VFM284 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC147178_12(AC147178|pid:none) Medicago truncatula clone mth2-14...    47   0.001
AC147178_11(AC147178|pid:none) Medicago truncatula clone mth2-14...    44   0.012
AB023033_7(AB023033|pid:none) Arabidopsis thaliana genomic DNA, ...    42   0.044
AM424178_2(AM424178|pid:none) Vitis vinifera contig VV78X111729....    42   0.057
AL844509_312(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    41   0.075
AK364133_1(AK364133|pid:none) Hordeum vulgare subsp. vulgare mRN...    41   0.075
CP002416_1668(CP002416|pid:none) Clostridium thermocellum DSM 13...    39   0.37
CP000581_222(CP000581|pid:none) Ostreococcus lucimarinus CCE9901...    38   0.63
EF517792_9(EF517792|pid:none) Capsicum frutescens BAC 215H17, co...    38   0.83
EF517794_9(EF517794|pid:none) Solanum bulbocastanum BAC 27I18, c...    38   0.83

Homology VFM284 vs Genome