Homology VFM273 vs DNA
Query= VFM273 (VFM273Q) /CSM/VF/VFM2-D/VFM273Q.Seq.d/
(1259 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ434997) Dictyostelium discoideum cDNA clone:ddv25a20, 3' ... 1205 0.0 1
(BJ401316) Dictyostelium discoideum cDNA clone:dds22i22, 3' ... 1181 0.0 1
(Y13097) Dictyostelium discoideum dstA mRNA for STATa protei... 1148 0.0 2
(BJ416307) Dictyostelium discoideum cDNA clone:ddv25a20, 5' ... 1142 0.0 1
(BJ389946) Dictyostelium discoideum cDNA clone:dds20k16, 5' ... 1142 0.0 1
(C92620) Dictyostelium discoideum slug cDNA, clone SSF533. 1025 0.0 2
(BJ381119) Dictyostelium discoideum cDNA clone:ddc40m12, 3' ... 1049 0.0 1
(AU034115) Dictyostelium discoideum slug cDNA, clone SLB759. 787 0.0 3
(BJ402149) Dictyostelium discoideum cDNA clone:dds20k16, 3' ... 1013 0.0 1
(BJ408238) Dictyostelium discoideum cDNA clone:dds45m01, 3' ... 967 0.0 1
(BJ445333) Dictyostelium discoideum cDNA clone:ddv59l06, 3' ... 916 0.0 1
(BJ378261) Dictyostelium discoideum cDNA clone:ddc31g12, 3' ... 866 0.0 1
(BJ383603) Dictyostelium discoideum cDNA clone:ddc53i15, 3' ... 860 0.0 1
(BJ390557) Dictyostelium discoideum cDNA clone:dds22i22, 5' ... 821 0.0 1
(BJ407968) Dictyostelium discoideum cDNA clone:dds44b09, 3' ... 811 0.0 1
(BJ381307) Dictyostelium discoideum cDNA clone:ddc41i03, 3' ... 811 0.0 1
(BJ350631) Dictyostelium discoideum cDNA clone:dda40c17, 3' ... 783 0.0 1
(BJ380986) Dictyostelium discoideum cDNA clone:ddc39p20, 3' ... 775 0.0 1
(BJ378302) Dictyostelium discoideum cDNA clone:ddc31a18, 3' ... 775 0.0 1
(BJ442820) Dictyostelium discoideum cDNA clone:ddv51f05, 3' ... 767 0.0 1
(BJ440956) Dictyostelium discoideum cDNA clone:ddv45a10, 3' ... 747 0.0 1
(BJ381646) Dictyostelium discoideum cDNA clone:ddc42o05, 3' ... 658 0.0 1
(AU060856) Dictyostelium discoideum slug cDNA, clone SLB759. 339 0.0 2
(AU051877) Dictyostelium discoideum slug cDNA, clone SSB393. 583 e-170 2
(BJ357066) Dictyostelium discoideum cDNA clone:dda62i07, 3' ... 559 e-155 1
(AU072024) Dictyostelium discoideum slug cDNA, clone SSD210. 468 e-127 1
(AU060105) Dictyostelium discoideum slug cDNA, clone SLA322. 274 8e-69 1
(C92189) Dictyostelium discoideum slug cDNA, clone SSD210. 252 6e-67 2
(AU072980) Dictyostelium discoideum slug cDNA, clone SSF621. 184 7e-51 2
(BJ347519) Dictyostelium discoideum cDNA clone:dda27h10, 3' ... 137 1e-27 1
(AJ581661) Dictyostelium discoideum partial dstB gene for Dd... 48 4e-07 2
(AJ301670) Dictyostelium discoideum mRNA for STATc transcrip... 34 0.008 4
(DX096695) AU_BAC011B1C05_T7 CHORI212 Ictalurus punctatus ge... 42 0.21 2
(CR384105) Zebrafish DNA sequence from clone CH211-186K13 in... 38 0.43 6
(CT954299) N.leucogenys DNA sequence from clone CH271-261H3. 48 0.81 1
(AC207026) Pongo abelii BAC clone CH276-157D24 from chromoso... 48 0.81 1
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 48 0.81 1
(EJ405969) 1093012093431 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.81 1
(AU052902) Dictyostelium discoideum slug cDNA, clone SLF293. 48 0.81 1
(BJ324368) Dictyostelium discoideum cDNA clone:dda6a01, 5' e... 48 0.81 1
(AC181546) Strongylocentrotus purpuratus clone R3-1109O20, W... 42 0.89 3
(CT027672) Zebrafish DNA sequence from clone DKEYP-97B10 in ... 36 1.7 2
(EJ030884) 1095454046863 Global-Ocean-Sampling_GS-26-01-01-1... 38 2.1 3
(AY186735) Lycopersicon esculentum SP3D (SP3D) gene, complet... 46 3.2 1
(CW148663) 104_547_11142072_148_35009_090 Sorghum methylatio... 46 3.2 1
(BZ330523) hv93b11.b1 WGS-SbicolorF (JM107 adapted methyl fi... 46 3.2 1
(BZ329136) hv84a06.b1 WGS-SbicolorF (JM107 adapted methyl fi... 46 3.2 1
(BH760637) BMBAC315D12SP6_PSU Brugia malayi Genomic Bac Libr... 46 3.2 1
(BE653633) UI-M-AH1-agv-e-07-0-UI.r1 NIH_BMAP_MCE_N Mus musc... 46 3.2 1
(CU184798) Zebrafish DNA sequence from clone CH211-100M16 in... 38 3.9 6
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 34 4.3 16
(AL121996) Human DNA sequence from clone GS1-118G19 on chrom... 34 4.5 4
(CT583705) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 4.9 5
(AC201687) Strongylocentrotus purpuratus clone R3-3121J19, W... 34 5.5 7
(CE806362) tigr-gss-dog-17000331483858 Dog Library Canis lup... 36 5.7 3
(AC232664) Lama pacos clone CH246-208J9, WORKING DRAFT SEQUE... 32 5.8 2
(BZ730263) OGFAW91TM ZM_0.7_1.5_KB Zea mays genomic clone ZM... 32 6.5 3
(EU523756) Uroctonus mordax mitochondrion, complete genome. 34 6.8 4
(AL121871) Human DNA sequence from clone RP13-258O15 on chro... 40 6.8 7
(ER452509) 1092963854686 Global-Ocean-Sampling_GS-35-01-01-1... 30 7.2 3
(AC192006) Pan troglodytes BAC clone CH251-598J20 from chrom... 40 7.8 7
(CT824395) Equus caballus GSS, BAC clone CH241-4C20, T7 end ... 32 8.0 2
(EK127440) 1092991300495 Global-Ocean-Sampling_GS-31-01-01-1... 30 8.2 4
(AC150889) Medicago truncatula chromosome 7 clone mte1-61j12... 32 8.3 8
(BB143528) Mus musculus adult female vagina cDNA, RIKEN full... 32 8.4 2
(AC168437) Strongylocentrotus purpuratus clone R3-39F19, WOR... 34 8.4 5
(CU326366) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 8.5 5
(AM462749) Vitis vinifera contig VV78X251594.2, whole genome... 40 8.5 3
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 36 8.9 5
(ER997825) ZMMBHo0004L15.r ZMMBHo Zea mays genomic clone ZMM... 34 9.1 3
(AC209447) Macaca mulatta Y BAC CH250-317A11 (Children's Hos... 36 9.3 5
(CZ122290) OA_BBa0010D10.f OA_BBa Oryza alta genomic clone O... 42 9.7 2
(AP008971) Finegoldia magna ATCC 29328 DNA, complete genome. 34 9.8 21
(BJ400137) Dictyostelium discoideum cDNA clone:dds8n20, 3' e... 34 9.8 2
>(BJ434997) Dictyostelium discoideum cDNA clone:ddv25a20, 3' end,
single read.
Length = 635
Score = 1205 bits (608), Expect = 0.0
Identities = 608/608 (100%)
Strand = Plus / Minus
Query: 625 aaatcacttgggctcaattcatcaatacccttcaaagacatttcttaattgccactaaac 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aaatcacttgggctcaattcatcaatacccttcaaagacatttcttaattgccactaaac 576
Query: 685 aagatcctgtaagaccaaaacgtccactctcttcctatgatttgaaatatattcaaactc 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aagatcctgtaagaccaaaacgtccactctcttcctatgatttgaaatatattcaaactc 516
Query: 745 atttctttggtaatcgttcaatcattcaccaacaagatttcgataaattttgggtttggt 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 atttctttggtaatcgttcaatcattcaccaacaagatttcgataaattttgggtttggt 456
Query: 805 tcggtaaatcaatgcaaactcttagatatcaaagacatatttcaactttatggcaagaag 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tcggtaaatcaatgcaaactcttagatatcaaagacatatttcaactttatggcaagaag 396
Query: 865 gtatcatttatggctatatgggtagacaagaagttaatgatgctttacaaaatcaagatc 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtatcatttatggctatatgggtagacaagaagttaatgatgctttacaaaatcaagatc 336
Query: 925 caggcacatttattataagatttagtgaaagaaatcctggtcaatttggtattgcttata 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 caggcacatttattataagatttagtgaaagaaatcctggtcaatttggtattgcttata 276
Query: 985 ttggtgttgaaatgccagctcgaattaaacattatttggttcaaccaaatgatactgctg 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttggtgttgaaatgccagctcgaattaaacattatttggttcaaccaaatgatactgctg 216
Query: 1045 ccgcaaagaaaactttccctgactttttatcagagcattctcaattcgtaaacttacttc 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ccgcaaagaaaactttccctgactttttatcagagcattctcaattcgtaaacttacttc 156
Query: 1105 aatggactaaggatacaaatggtgcaccaagatttttaaaattacacaaagatactgctt 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aatggactaaggatacaaatggtgcaccaagatttttaaaattacacaaagatactgctt 96
Query: 1165 taggttcctttgctccaaaaagaacagctcctgtacctgttggggttatgaacctttaaa 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 taggttcctttgctccaaaaagaacagctcctgtacctgttggggttatgaacctttaaa 36
Query: 1225 tagttaaa 1232
||||||||
Sbjct: 35 tagttaaa 28
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,549,438,430
Number of extensions: 91766908
Number of successful extensions: 7358474
Number of sequences better than 10.0: 75
Length of query: 1259
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1235
Effective length of database: 96,409,374,237
Effective search space: 119065577182695
Effective search space used: 119065577182695
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home