Homology VFL837 vs Protein
Query= VFL837 (VFL837Q) /CSM/VF/VFL8-B/VFL837Q.Seq.d/
(526 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP000583_96(CP000583|pid:none) Ostreococcus lucimarinus CCE9901 ... 111 2e-23
CR954203_94(CR954203|pid:none) Ostreococcus tauri strain OTTH059... 108 9e-23
BT033317_1(BT033317|pid:none) Zea mays full-length cDNA clone ZM... 106 6e-22
EU958991_1(EU958991|pid:none) Zea mays clone 208647 unknown mRNA. 106 6e-22
AK069774_1(AK069774|pid:none) Oryza sativa Japonica Group cDNA c... 105 1e-21
AM451482_4(AM451482|pid:none) Vitis vinifera contig VV78X165379.... 104 2e-21
BT097590_1(BT097590|pid:none) Soybean clone JCVI-FLGm-22C16 unkn... 103 3e-21
EF147277_1(EF147277|pid:none) Populus trichocarpa clone WS0122_C... 103 4e-21
AB015477_4(AB015477|pid:none) Arabidopsis thaliana genomic DNA, ... 101 2e-20
CU329671_1318(CU329671|pid:none) Schizosaccharomyces pombe chrom... 84 2e-15
(O94673) RecName: Full=Uncharacterized membrane protein C776.05;... 84 4e-15
AL451017_5(AL451017|pid:none) Neurospora crassa DNA linkage grou... 74 3e-12
FM992688_968(FM992688|pid:none) Candida dubliniensis CD36 chromo... 74 3e-12
FQ857332_11(FQ857332|pid:none) Piriformospora indica PIRI_contig... 73 7e-12
FN393070_398(FN393070|pid:none) Saccharomyces cerevisiae EC1118 ... 72 2e-11
CP003003_382(CP003003|pid:none) Myceliophthora thermophila ATCC ... 71 2e-11
AE017342_480(AE017342|pid:none) Cryptococcus neoformans var. neo... 70 4e-11
(P48236) RecName: Full=Uncharacterized membrane protein YGR149W;... 70 5e-11
CP001575_307(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 69 8e-11
AM270031_11(AM270031|pid:none) Aspergillus niger contig An02c037... 69 8e-11
HE576754_542(HE576754|pid:none) Naumovozyma castellii CBS 4309 c... 69 1e-10
CR382134_634(CR382134|pid:none) Debaryomyces hansenii strain CBS... 67 4e-10
CP000497_420(CP000497|pid:none) Scheffersomyces stipitis CBS 605... 67 4e-10
AP007151_1250(AP007151|pid:none) Aspergillus oryzae RIB40 DNA, S... 66 9e-10
AM920435_705(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 64 3e-09
CP002497_391(CP002497|pid:none) Eremothecium cymbalariae DBVPG#7... 62 1e-08
CU640366_277(CU640366|pid:none) Podospora anserina S mat+ genomi... 62 1e-08
CU928169_298(CU928169|pid:none) Kluyveromyces thermotolerans str... 62 1e-08
FN392320_1240(FN392320|pid:none) Pichia pastoris GS115 chromosom... 59 9e-08
FQ790330_70(FQ790330|pid:none) Botryotinia fuckeliana isolate T4... 55 1e-06
FN357391_7(FN357391|pid:none) Schistosoma mansoni genome sequenc... 50 4e-05
FN357391_6(FN357391|pid:none) Schistosoma mansoni genome sequenc... 50 4e-05
FN357391_8(FN357391|pid:none) Schistosoma mansoni genome sequenc... 49 2e-04
AM502253_94(AM502253|pid:none) Leishmania infantum chromosome 35... 43 0.006
FR799622_79(FR799622|pid:none) Leishmania donovani BPK282A1 comp... 43 0.006
AM494971_84(AM494971|pid:none) Leishmania braziliensis chromosom... 43 0.006
FR799587_77(FR799587|pid:none) Leishmania mexicana MHOM/GT/2001/... 42 0.011
AP009493_2014(AP009493|pid:none) Streptomyces griseus subsp. gri... 37 0.45
CP002669_635(CP002669|pid:none) Mycoplasma hyorhinis MCLD, compl... 37 0.59
CP002170_486(CP002170|pid:none) Mycoplasma hyorhinis HUB-1, comp... 37 0.59
AP008211_497(AP008211|pid:none) Oryza sativa (japonica cultivar-... 35 1.7
FQ859185_741(FQ859185|pid:none) Streptomyces cattleya str. NRRL ... 35 2.3
FQ857340_4(FQ857340|pid:none) Piriformospora indica PIRI_contig_... 34 2.9
CP002993_4562(CP002993|pid:none) Streptomyces sp. SirexAA-E, com... 34 2.9
CP002475_1785(CP002475|pid:none) Streptomyces flavogriseus ATCC ... 34 2.9
CP000768_879(CP000768|pid:none) Campylobacter jejuni subsp. doyl... 33 6.6
CP000716_465(CP000716|pid:none) Thermosipho melanesiensis BI429,... 33 8.6
>CP000583_96(CP000583|pid:none) Ostreococcus lucimarinus CCE9901
chromosome 3, complete sequence.
Length = 345
Score = 111 bits (277), Expect = 2e-23
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Frame = +3
Query: 12 FKLVFALSNGPLAWGTIVWRNSLVFHDVDKLTSVFIHLCPPIVTYCLRWF-----PNVYP 176
F+ +FA +NGP+ +WRNSLVFH VDK++S+F+H P ++T+C RW+ N
Sbjct: 105 FRCIFAFANGPVLLAIPLWRNSLVFHSVDKVSSIFVHAMPCLMTWCGRWYGFGNDVNRLS 164
Query: 177 EQLACGGVECVLSFKEIFFVPFMVYAFWQVFYYIKTEVVDSDKLANDKEIMTSSRWMSVK 356
+ V + ++ P Y FWQ Y KTE++D KL +D +MTS RW++
Sbjct: 165 VRELGADVSVLTGCLDLMVYPMFAYLFWQALYLAKTELIDRVKLVSDPALMTSLRWLASD 224
Query: 357 QPHPIYRWCQK--------------NGYNVSPVVILILVQMLYTLATCISLPFLIQSFWL 494
+ ++ K + ++ + +++Q+ YT+ T I +P +++
Sbjct: 225 RNSSANKYALKMMRGIGLFGADEFFDAESIKTKFVFVMLQLGYTIVTFIPIPLCYSNYYA 284
Query: 495 HTVFM 509
HT M
Sbjct: 285 HTALM 289
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,674,281,571
Number of extensions: 36579205
Number of successful extensions: 74568
Number of sequences better than 10.0: 47
Number of HSP's gapped: 74535
Number of HSP's successfully gapped: 47
Length of query: 175
Length of database: 1,732,582,204
Length adjustment: 123
Effective length of query: 52
Effective length of database: 1,074,629,005
Effective search space: 55880708260
Effective search space used: 55880708260
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
Dictyostelium discoideum cDNA Project Home