Homology VFL837 vs DNA
Query= VFL837 (VFL837Q) /CSM/VF/VFL8-B/VFL837Q.Seq.d/
(526 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ434599) Dictyostelium discoideum cDNA clone:ddv24j10, 3' ... 1023 0.0 1
(BJ401456) Dictyostelium discoideum cDNA clone:dds23f09, 3' ... 1023 0.0 1
(BJ382839) Dictyostelium discoideum cDNA clone:ddc46d05, 3' ... 1023 0.0 1
(BJ375462) Dictyostelium discoideum cDNA clone:ddc18e24, 3' ... 1023 0.0 1
(BJ445646) Dictyostelium discoideum cDNA clone:ddv60m05, 3' ... 1015 0.0 1
(BJ378070) Dictyostelium discoideum cDNA clone:ddc27a04, 3' ... 999 0.0 1
(BJ430962) Dictyostelium discoideum cDNA clone:ddv9l08, 3' e... 985 0.0 1
(BJ379384) Dictyostelium discoideum cDNA clone:ddc34o15, 3' ... 977 0.0 1
(BJ339833) Dictyostelium discoideum cDNA clone:dda10g17, 3' ... 912 0.0 1
(C92384) Dictyostelium discoideum slug cDNA, clone SSE723. 815 0.0 2
(AU052436) Dictyostelium discoideum slug cDNA, clone SLD316. 753 0.0 1
(C23726) Dictyostelium discoideum gamete cDNA, clone FC-AB35. 412 e-111 1
(AU074219) Dictyostelium discoideum slug cDNA, clone SSJ833. 299 5e-77 1
(AU272277) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 92 2e-14 1
(AU272276) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 92 2e-14 1
(AU072498) Dictyostelium discoideum slug cDNA, clone SSE723. 64 6e-06 1
(AC125517) Mus musculus BAC clone RP24-261P6 from chromosome... 48 0.33 1
(AC144222) Macaca mulatta clone CH250-272E23, *** SEQUENCING... 46 1.3 1
(ED443121) AUAC-aal09c08.g1 Ascaris suum whole genome shotgu... 36 2.0 2
(ED329152) AUAC-aae71e09.g1 Ascaris suum whole genome shotgu... 36 2.0 2
(ED325785) AUAC-aad49h01.b1 Ascaris suum whole genome shotgu... 36 2.3 2
(ED173891) AUAC-aau33f03.b1 Ascaris suum whole genome shotgu... 36 2.4 2
(CU459009) Zebrafish DNA sequence from clone CH73-47C6 in li... 44 5.1 1
(AM442325) Vitis vinifera contig VV78X216206.5, whole genome... 44 5.1 1
(FP017208) Medicago truncatula chromosome 5 clone mth2-87k22... 44 5.1 1
(FP016158) Medicago truncatula chromosome 5 clone mth2-46i6,... 44 5.1 1
(AC198692) Zea mays chromosome unknown clone CH201-507K5; ZM... 44 5.1 1
(AC196094) Zea mays chromosome unknown clone CH201-350J18; Z... 44 5.1 1
(AQ679050) HS_2125_B1_G06_MR CIT Approved Human Genomic Sper... 44 5.1 1
(FI144143) Fragment_1365 Pseudomonas syringae strain NPS3121... 44 5.1 1
(CG948093) MBEFR51TF mth2 Medicago truncatula genomic clone ... 44 5.1 1
(CP000075) Pseudomonas syringae pv. syringae B728a, complete... 44 5.1 1
(CP000058) Pseudomonas syringae pv. phaseolicola 1448A, comp... 44 5.1 1
(CP000013) Borrelia garinii PBi, complete genome. 44 5.1 1
(EC315258) REPROTRACTF091692K5 POSSUM_01-POSSUM-C-REPROTRACT... 36 8.5 2
(AC027238) Homo sapiens chromosome 8, clone RP11-377F20, com... 32 9.2 2
(AC011626) Homo sapiens chromosome 8, clone RP11-369K17, com... 32 9.2 2
(AC022873) Homo sapiens chromosome 8 clone RP11-391B20 map 8... 32 9.3 2
(AC212384) Nomascus leucogenys chromosome UNK clone CH271-38... 30 9.3 2
(AC067984) Homo sapiens chromosome 8 clone RP11-551A23 map 8... 32 9.3 2
(EJ448905) 1093015395532 Global-Ocean-Sampling_GS-28-01-01-1... 34 9.4 2
>(BJ434599) Dictyostelium discoideum cDNA clone:ddv24j10, 3' end,
single read.
Length = 516
Score = 1023 bits (516), Expect = 0.0
Identities = 516/516 (100%)
Strand = Plus / Minus
Query: 11 attcaaattggtatttgcactaagtaatggtccattggcatggggtacaatcgtatggag 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 attcaaattggtatttgcactaagtaatggtccattggcatggggtacaatcgtatggag 457
Query: 71 aaatagtttagtattccatgatgttgacaagttgacatcggttttcattcatctttgtcc 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aaatagtttagtattccatgatgttgacaagttgacatcggttttcattcatctttgtcc 397
Query: 131 accaattgtaacctattgtttgcgttggttcccaaacgtttatccagagcaattggcatg 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 accaattgtaacctattgtttgcgttggttcccaaacgtttatccagagcaattggcatg 337
Query: 191 tggtggtgtagagtgtgttttatcctttaaagagattttctttgttccattcatggtgta 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tggtggtgtagagtgtgttttatcctttaaagagattttctttgttccattcatggtgta 277
Query: 251 tgcattttggcaagtcttttactacattaaaactgaggtggtcgatagtgacaaattagc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgcattttggcaagtcttttactacattaaaactgaggtggtcgatagtgacaaattagc 217
Query: 311 caatgacaaggaaataatgacctcttcaagatggatgtctgtaaaacaaccccacccaat 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 caatgacaaggaaataatgacctcttcaagatggatgtctgtaaaacaaccccacccaat 157
Query: 371 ctatagatggtgtcaaaagaatggttacaacgttagtcctgtggttattttaattttagt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ctatagatggtgtcaaaagaatggttacaacgttagtcctgtggttattttaattttagt 97
Query: 431 tcaaatgctttacactttggccacttgtatctctttacctttcttaattcaatcattttg 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 tcaaatgctttacactttggccacttgtatctctttacctttcttaattcaatcattttg 37
Query: 491 gttacacactgtctttatgatttacatctttgtcac 526
||||||||||||||||||||||||||||||||||||
Sbjct: 36 gttacacactgtctttatgatttacatctttgtcac 1
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 593,546,969
Number of extensions: 34160326
Number of successful extensions: 2636725
Number of sequences better than 10.0: 41
Length of query: 526
Length of database: 98,766,808,389
Length adjustment: 23
Effective length of query: 503
Effective length of database: 96,507,600,660
Effective search space: 48543323131980
Effective search space used: 48543323131980
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home