Dictyostelium discoideum cDNA Clone VFL835

Sequence VFL835

GCCTACTGGA GTCACTTCTA AACAACAATA ACAATATGAG TCATCGTAAA
TTTGAAGCTC CACGTCACGG TAATCTCGGT TTCAGACCAA GAAAGAGAGC
CGCCAGACAT CAAGGTAAAG TCAAGTCATT CCCAAAGGAT GACCGTACCC
AAAAAGTCCA CTTAACTGCA TTCATGGGTT ACAAAGCTGG TATGACTCAC
GTTGTCAGAG ATTTAGAAAA ACCAGGTTCA AAGATGCACA AAAAAGAAAT
CGTTGAAGCC GTCACCATCA TTGAATGTCC ACCAATGTAC ATTGTTGGTT
TAGTTGGTTA TGTTGAAACC GCTCAAGGTC TCAAAACCTA CAAAACCGTC
TGGGCTCAAC ATTTAAGTGA TAACTTCCGT AGAAGATTAT ACAAAAACTG
GTACAAATCA AAATCAAAGA AAGCTTTCAC CAAATACGTT AAACAATACG
AAACTGAAGA AGGTAAAAAA TCAATTGAAG CCTCTCTCCA AGCCATCAAA
AAGAGATGTT CAGTCGTCCG TGTCATTGCT CACACTCAAG TTCACAAATT
AAAATTAACT CAAAAGAAAG CACACGTCCC TTGAAATCCA AGTCAATGGT
GGTTCGATCG TCGAAAAAGT TAACTTTGCT GTTGCCAACT TTGAAAAGAC
CGTCAACGTC ACTGGTGTCT TTGCCGAAAA TGAATTAATC GATGTTATCG
GTGTAACCAA AGGTAAAGGT TTCAATGGTG TCATTAAAAG ATGGGGTGTC
CGTAAATTAC CAAGAAAGAC CCATAAAGGT TTAAGAAAGG TTGCCTGTAT
TGGTGCATGG CATCCATCCC GTGTTAGTAC CACCGTCCCA AGAGCTGGTC
AACTCGGTTA CCATCATCGT GTCGAAAGAA ACAAGAAGAT TTACAGAATC
GGTCAAGCTC AACCAGAAGA CGGTAAACAA ATCTCAACCG GTAAGACTGA
ATTCGATTTA ACTGAAAAGA CTATCAATCC AATGGGTGGT TTCGCTCACT
ACGGTATGGT TAAACATGAA TTCTTAATGC TTAAAGGTTG TGTTGCTGGT
CCAAGAAAGA GAGCCTTAAC CTTAAGAAAG AGTATCACCA CTCAAACTGG
TCGTGCTGCC CTCGAGAAAA TCACTCTCAA ATTCATCGAT ACCTCCAGCA
AGTTTGGTCA CGGTCTTCAT CAAACCGCTG AAGATAAGAC TAAATATTTC
GGCGTCAAGA AATCAAGATC AACTAAGGCT TAAATTCAAT AAATTAGATT
TCAGAGAGTT ATCAAACA

Translated Amino Acid Sequence VFL835

aywshf*ttiti*vivnlklhvtvisvsdqereppdikvksshsqrmtvpkkst*lhswv
tklv*ltlsei*knqvqrctkkkslkpspslnvhqctllv*lvmlkplkvskptkpsgln
i*vitsvedytktgtnqnqrklspntlnntklkkvknqlkplskpskrdvqssvslltlk
ftn*n*LKRKHTSLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKG
FNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRI
GQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRK
SITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTKYFGVKKSRSTKA*iq*irfqrv
ik

Homology VFL835 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFL835 (VFL835Q) /CSM/VF/VFL8-B/VFL835Q.Seq.d/                       2514   0.0
VFI645 (VFI645Q) /CSM/VF/VFI6-B/VFI645Q.Seq.d/                       2468   0.0
VFF223 (VFF223Q) /CSM/VF/VFF2-A/VFF223Q.Seq.d/                       2466   0.0
VFC883 (VFC883Q) /CSM/VF/VFC8-D/VFC883Q.Seq.d/                       2464   0.0
VFF417 (VFF417Q) /CSM/VF/VFF4-A/VFF417Q.Seq.d/                       2462   0.0
VFI188 (VFI188Q) /CSM/VF/VFI1-D/VFI188Q.Seq.d/                       2458   0.0
VFF634 (VFF634Q) /CSM/VF/VFF6-B/VFF634Q.Seq.d/                       2456   0.0
VFC683 (VFC683Q) /CSM/VF/VFC6-D/VFC683Q.Seq.d/                       2456   0.0
VFI571 (VFI571Q) /CSM/VF/VFI5-C/VFI571Q.Seq.d/                       2452   0.0
VFD410 (VFD410Q) /CSM/VF/VFD4-A/VFD410Q.Seq.d/                       2452   0.0

Homology VFL835 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ430959) Dictyostelium discoideum cDNA clone:ddv9k11, 3' e...  1511   0.0    1
(BJ398036) Dictyostelium discoideum cDNA clone:dds10o17, 3' ...  1509   0.0    1
(BJ430416) Dictyostelium discoideum cDNA clone:ddv7n04, 3' e...  1503   0.0    1
(BJ431972) Dictyostelium discoideum cDNA clone:ddv17o04, 3' ...  1501   0.0    1
(BJ432572) Dictyostelium discoideum cDNA clone:ddv19h02, 3' ...  1493   0.0    1
(BJ434578) Dictyostelium discoideum cDNA clone:ddv24f10, 3' ...  1489   0.0    1
(BJ432435) Dictyostelium discoideum cDNA clone:ddv18m17, 3' ...  1483   0.0    1
(BJ428776) Dictyostelium discoideum cDNA clone:ddv1o06, 3' e...  1479   0.0    2
(BJ432325) Dictyostelium discoideum cDNA clone:ddv18i12, 3' ...  1473   0.0    1
(BJ431479) Dictyostelium discoideum cDNA clone:ddv14g09, 3' ...  1473   0.0    1

Homology VFL835 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P34113) RecName: Full=60S ribosomal protein L3;  &JC4254(JC4254...   439   0.0
AM471157_1(AM471157|pid:none) Vitis vinifera contig VV78X211407....   281   e-147
EF144245_1(EF144245|pid:none) Populus trichocarpa clone PX0011_L...   281   e-147
DQ241849_1(DQ241849|pid:none) Solanum tuberosum clone 187E04 rib...   285   e-147
BC158279_1(BC158279|pid:none) Xenopus tropicalis hypothetical pr...   284   e-146
AM452874_1(AM452874|pid:none) Vitis vinifera contig VV78X187512....   280   e-146
EF146052_1(EF146052|pid:none) Populus trichocarpa clone WS0115_D...   276   e-146
AJ720292_1(AJ720292|pid:none) Gallus gallus mRNA for hypothetica...   280   e-145
EF145479_1(EF145479|pid:none) Populus trichocarpa clone WS01125_...   276   e-145
AC125473_1(AC125473|pid:none) Medicago truncatula clone mth2-8j1...   278   e-145

Homology VFL835 vs Genome