Dictyostelium discoideum cDNA Clone VFL734

Sequence VFL734

CGGGATTCCT GCGNGACACT GTTGGCCTAC TGGNAATTGT CACCTGACTT
ACATAAAAGA AAATGAAATT ACTTATTTTA ACTTTATTTT TAGCTACTAT
TGTTTTAGCT CAAGCTTTAA CAGTACCATT AAACTTCCAT CAAGCTTCAA
GAGAATCTAG AAGAAGAGTT CCACAAAAAT GGTCAAACAG ATTATCTGCT
CTCAATGCTG GTACCACAAT CCCAATTTCA GATTTTGAAG ATGCTCAATA
CTATGGTGCC ATTACCATTG GTACCCCAGG TCAAGCCTTC AAAGTAGTTT
TCGATACTGG TTCATCCAAC TTGTGGATTC CATCAAAGAA ATGTCCAATC
ACTGTTGTTG CATGTGATTT ACATAACAAA TATAACAGCG GTGCCTCAAG
CACATATGTC GCCAACGGAA CTGATTTCAC CATCCAATAC GGTAGTGGTG
CTATGTCAGG TTTTGTCTCT CAAGATTCCG TCACTGTTGG TTCATTAACT
GTTAAAGATC AATTATTCGC TGAAGCCACT GCCGAACCAG GTATTGCTTT
CGATTTCGCC AAATTCGATG GTATTTTAGG TCTTGCTTTC CAATCCATCT
CTGTTAATTC AATTCCACCA GTCTTTTACA ACATGTTATC ACAAGGTTTA
GTTTCATCAA CACTCTTCTC CTTCTGGTTA TCAAGAACTC CAGGTGCCAA
CGGTGGTGAA CTCTCATTCG GTTCAATCGA TAACACCAAA TACACTGGTG
ACATTACCTA CGTCCCATTA ACCAACGAAA CCTATTGGGA ATTCGTTATG
GATGACTTTG CTATCGATGG TCAATCAGCT GGTTTCTGTG GTACTACTTG
TCACGCAATT TGCGATTCAG GTACATCACT CATTGCTGGT CCAATGGCTG
ATATTACTGC CCTCAATGAA AAATTAGGTG CTGTCATCTT AAATGGTGAA
GGTGTCTTCT CTGATTGTAG CGTTATCAAC ACCTTACCAA ATGTTACCAT
CACCGTTGTT GGTCGTGAAT TTGTTTTAAC TCCAAAAGAA TACGTTTTAG
AAGTTACTGA GTTCGGAAAG ACTGAATGTT TGAGTGGATT TATGGGTATC
GAGTTAAACA TGGGAAATTT CTGGATCCTT GGTGATGTTT TCATCTCTGC
TTACTATACT GTATTCGATT TTGGTAATAA ACAAGTTGGT TTCGCAACTG
CCATTCAAGG TTAAATTTTT TTAATTAATT TATATTTAAG NATAGAAATA
AAACTAA

Translated Amino Acid Sequence VFL734

gflrdtvgllxivt*lt*KKMKLLILTLFLATIVLAQALTVPLNFHQASRESRRRVPQKW
SNRLSALNAGTTIPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVA
CDLHNKYNSGASSTYVANGTDFTIQYGSGAMSGFVSQDSVTVGSLTVKDQLFAEATAEPG
IAFDFAKFDGILGLAFQSISVNSIPPVFYNMLSQGLVSSTLFSFWLSRTPGANGGELSFG
SIDNTKYTGDITYVPLTNETYWEFVMDDFAIDGQSAGFCGTTCHAICDSGTSLIAGPMAD
ITALNEKLGAVILNGEGVFSDCSVINTLPNVTITVVGREFVLTPKEYVLEVTEFGKTECL
SGFMGIELNMGNFWILGDVFISAYYTVFDFGNKQVGFATAIQG*iflinlylxieikl

Homology VFL734 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFL734 (VFL734Q) /CSM/VF/VFL7-B/VFL734Q.Seq.d/                       2432   0.0
VFM401 (VFM401Q) /CSM/VF/VFM4-A/VFM401Q.Seq.d/                       2375   0.0
VFN222 (VFN222Q) /CSM/VF/VFN2-A/VFN222Q.Seq.d/                       2369   0.0
VFL385 (VFL385Q) /CSM/VF/VFL3-D/VFL385Q.Seq.d/                       2369   0.0
VFF495 (VFF495Q) /CSM/VF/VFF4-D/VFF495Q.Seq.d/                       2369   0.0
VFE162 (VFE162Q) /CSM/VF/VFE1-C/VFE162Q.Seq.d/                       2369   0.0
VFD884 (VFD884Q) /CSM/VF/VFD8-D/VFD884Q.Seq.d/                       2369   0.0
VFD841 (VFD841Q) /CSM/VF/VFD8-B/VFD841Q.Seq.d/                       2369   0.0
VFD535 (VFD535Q) /CSM/VF/VFD5-B/VFD535Q.Seq.d/                       2369   0.0
VFN467 (VFN467Q) /CSM/VF/VFN4-C/VFN467Q.Seq.d/                       2363   0.0

Homology VFL734 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(Y16962) Dictyostelium discoideum mRNA for cathepsin D.          2319   0.0    3
(AJ243946) Dictyostelium discoideum ctsD gene for cathepsin ...  2161   0.0    3
(BJ373040) Dictyostelium discoideum cDNA clone:ddc15p12, 3' ...  1471   0.0    2
(BJ345649) Dictyostelium discoideum cDNA clone:dda28i09, 3' ...  1465   0.0    1
(BJ435614) Dictyostelium discoideum cDNA clone:ddv27n14, 3' ...  1457   0.0    3
(BJ430801) Dictyostelium discoideum cDNA clone:ddv8h22, 3' e...  1457   0.0    2
(BJ430875) Dictyostelium discoideum cDNA clone:ddv9i06, 3' e...  1455   0.0    2
(BJ428690) Dictyostelium discoideum cDNA clone:ddv12j21, 3' ...  1455   0.0    2
(BJ400399) Dictyostelium discoideum cDNA clone:dds13i02, 3' ...  1455   0.0    2
(BJ435313) Dictyostelium discoideum cDNA clone:ddv26b22, 3' ...  1451   0.0    2

Homology VFL734 vs Protein

Sequences producing significant alignments:                      (bits) Value


HM989012_1(HM989012|pid:none) Pteria penguin cathepsin D mRNA, c...   381   e-104
EF070454_1(EF070454|pid:none) Maconellicoccus hirsutus clone WHM...   375   e-102
HM989013_1(HM989013|pid:none) Pinctada maxima cathepsin D mRNA, ...   375   e-102
(Q03168) RecName: Full=Lysosomal aspartic protease;          EC=...   375   e-102
EF213114_1(EF213114|pid:none) Penaeus monodon cathepsin D mRNA, ...   374   e-102
DQ010007_1(DQ010007|pid:none) Bombyx mori CathD mRNA, complete c...   374   e-102
BT080419_1(BT080419|pid:none) Caligus clemensi clone ccle-evs-50...   373   e-101
AB106552_1(AB106552|pid:none) Todarodes pacificus tpaD mRNA for ...   367   e-100
DQ909010_1(DQ909010|pid:none) Clonorchis sinensis aspartic prote...   367   e-99
JF720347_1(JF720347|pid:none) Fasciola gigantica cathepsin D mRN...   363   8e-99

Homology VFL734 vs Genome