Dictyostelium discoideum cDNA Clone VFL168

Sequence VFL168

AGTTAAATTT TAAGAAAATG CCTCACTCAT TCGGTCTCCG TGCTCGTACC
AGATACTTGT TCTCTCGTGG TTTCAGAAAC CATGGTCTCT TACAAACCAC
CACCTTCTTA AGAACTTTCC GTTTAGGTGA TTACGTTGAT ATCAAAGCCA
CCGGTAATGT ACACAAAGGT ATGCCACACA AATTCTACCA CGGTCGTACC
GGTCGTGTTT GGAATGTTAC TCCACGTGCT GTTGGTGTCA TCATCAACAA
ACGTGTTGGT CCAAGAATCA TTGCCAAGAA AATCCACGTC AGAACTGAAC
ACGTCAAACC ATCAAACTCC ATGGCTGCTC ACTTAAAACG TATCCAAGAA
AACAAAAAAG CTGTCGTTGA AGCCAAGAAA GCCGGTAAAT GGGTCGATGT
TAGACGTAAC CCAGCTGCAC CAAAGGACGG TTTCTTTGTC AACCCAAGAA
ACACTGAATT CGTTGAAGTC AAACCAGTCA AATACGAACT TTTATTATAA
ATTAATTTAA AAGAGTGGTG GCTAATATGG TTCAATCGCA ATCCTTTGAT
TATCCAAATT TGTCTTATTT AAAAAAGAAA AATAAAAAAA AATNTAAAAA
AAAAAAANTT TNAAAAAAAA A--------- -CCAAATTTT TTTTTTTTTA
AAAANNAAAA TTNAAAAAAA TTTTNAAAAA AAAAAATNTT AAAAAAAAAA
AAAATATAAA TAAATAAATA TATACACAAA ATGTCAGATA TTATTGCAAG
AGGTAACGTC GAAAACGGTG ACAAACTTTT CAAAGCAAGA TGTGCTCAAT
GTCACACCAC TGCTAATGGT GCACCAAACA AACAAGGTCC AAATCTTTAC
GGTTTATTCG GTCGTAAATC AGGTTCCGTC GCTGGTTATG CCTACTCTGA
CGCCAACAAA AACGCTGGTA TCATGTGGGG TGAACAAACT CTCTTTGATT
ACTTAGAAAA TCCAAAGAAA TACATTCCAA AGACTAAAAT GGCCTTTGCT
GGTTTCAAAT CTGAACAAGA TAGAGCTGAT GTTGTCGCTT ACCTNAACAA
TCAACTAAAT AAACACATCA ATAA

Translated Amino Acid Sequence VFL168

vkf*enaslirspcsyqilvlswfqkpwsltnhhllknfpfr*lr*yqshr*ctqryatq
ilprsyrsclecystccwchhqqtcwsknhcqenprqn*trqtiklhgcslktyprkqks
cr*sqesr*mgrc*t*psctkgrflcqpkkh*ir*sqtsqirtfiin*FKRVVANMVQSQ
SFDYPNLSYLKKKNKKKXKKKKXXKK---

---PNFFFFKXXNXKKFXKKKXLKKKKI*inkyihkmsdiiargnvengdklfkarcaqc
httangapnkqgpnlyglfgrksgsvagyaysdanknagimwgeqtlfdylenpkkyipk
tkmafagfkseqdradvvaylnnqlnkhin

Homology VFL168 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VHK774 (VHK774Q) /CSM/VH/VHK7-D/VHK774Q.Seq.d/                       1130   0.0
VFL168 (VFL168Q) /CSM/VF/VFL1-C/VFL168Q.Seq.d/                       1130   0.0
VFJ214 (VFJ214Q) /CSM/VF/VFJ2-A/VFJ214Q.Seq.d/                       1130   0.0
VHH523 (VHH523Q) /CSM/VH/VHH5-A/VHH523Q.Seq.d/                       1122   0.0
VSB776 (VSB776Q) /CSM/VS/VSB7-D/VSB776Q.Seq.d/                       1118   0.0
FC-193 (FC-193Q) /CSM/CG/CG-FC/FC-193Q.Seq.d/                        1118   0.0
VSI403 (VSI403Q) /CSM/VS/VSI4-A/VSI403Q.Seq.d/                       1106   0.0
VSF754 (VSF754Q) /CSM/VS/VSF7-C/VSF754Q.Seq.d/                       1106   0.0
VSB311 (VSB311Q) /CSM/VS/VSB3-A/VSB311Q.Seq.d/                       1102   0.0
FC-BQ22 (FC-BQ22Q) /CSM/FC/FC-BQ/FC-BQ22Q.Seq.d/                     1102   0.0

Homology VFL168 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ424534) Dictyostelium discoideum cDNA clone:ddv52d19, 5' ...  1130   0.0    1
(BJ415743) Dictyostelium discoideum cDNA clone:ddv23g17, 5' ...  1130   0.0    1
(BJ414431) Dictyostelium discoideum cDNA clone:ddv19k04, 5' ...  1130   0.0    1
(BJ422514) Dictyostelium discoideum cDNA clone:ddv46m05, 5' ...  1122   0.0    1
(AU262240) Dictyostelium discoideum vegetative cDNA clone:VS...  1118   0.0    1
(AU265734) Dictyostelium discoideum vegetative cDNA clone:VS...  1106   0.0    1
(AU284945) Dictyostelium discoideum gamete cDNA clone:FC-BQ2...  1102   0.0    1
(AU261946) Dictyostelium discoideum vegetative cDNA clone:VS...  1102   0.0    1
(AU261683) Dictyostelium discoideum vegetative cDNA clone:VS...  1100   0.0    1
(AU261664) Dictyostelium discoideum vegetative cDNA clone:VS...  1092   0.0    1

Homology VFL168 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54X53) RecName: Full=60S ribosomal protein L21;                     268   3e-70
(Q869N1) RecName: Full=Cytochrome c;  &AC117080_15(AC117080|pid:...   198   5e-49
FN357335_1(FN357335|pid:none) Schistosoma mansoni genome sequenc...   154   8e-36
AY813279_1(AY813279|pid:none) Schistosoma japonicum SJCHGC00639 ...   150   1e-34
GN110337_1(GN110337|pid:none) Sequence 15118 from Patent WO20090...   150   2e-34
GN110445_1(GN110445|pid:none) Sequence 15226 from Patent WO20090...   149   3e-34
AF475114_1(AF475114|pid:none) Triticum aestivum 60s ribosomal pr...   149   3e-34
AK354981_1(AK354981|pid:none) Hordeum vulgare subsp. vulgare mRN...   149   3e-34
GN110339_1(GN110339|pid:none) Sequence 15120 from Patent WO20090...   149   3e-34
GN110301_1(GN110301|pid:none) Sequence 15082 from Patent WO20090...   147   8e-34

Homology VFL168 vs Genome