<List of Series> <Series: VFJ2-D> <Clone: VFJ281> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone VFJ281
Dictyostelium discoideum cDNA Project Home
Sequence VFJ281
AACCCTAATA AAAAAATAAA CTCATGTACA TATAAAAATT AAAATAAAAG
AAAAAAAAAT GAAAAGGACG ATAATAATAT TATTATTTGT ATCATTATTT
GTAACATTTG TTTTATCACA AATACCAGAT AATGATCCAG AATTATGTCA
ACAAAGAATT CAAAGAGAGG ATTGTCCACA AACACCAGTA CCATGGGGAA
CATTCAATGA CAATGACGAA ATCGAAGTCT ACTATATGCA AGCACCAGTT
TTCGAAGCAG TTTTTGGAAA TTTCTTTGGT AAGTTGGGTG GATATCATTC
AGCAATTGGT TTCTATGACC TTACAACTGG TTTAAATTAT ACAGCAGAAT
ATGATGCTTT CTTTGAAGTA GGAAATGGTA CATTACCAAA TATCATAAAT
GTCGATGGTA AAGATGAACT TTTATGGTGT AATGCTGGTA TCCTTTGTAC
TGTTCCATAC ATTAATGAAA CTTATTGGGA TAAAAACATC TATTCAACTG
CTTCAAAAAC TTATATGGGA ACAATTAATG GTACTCAATT AAATCAATAT
ATCGAATGGA TGCAACAATA TAATATTTCA AATCCAGTAT ACCAAACATG
---------- TTAGAAATTA AANAAGGNNC NATTGNCCNA ATCNTTGAAA
GAATTTTATC CATCCTTGGN TTAAANAAAN ANATTNNCGG TCNAGGNGNA
TATTANTTAT TAGAATTNAA TTANCCCTTT ATGNATGCNA AATATGNTTA
TATCCCNTTN CCNGGNTGGC CNGCNAANGG GATCGATTAT GAAAANGGCN
ATTTTATTCN TCCCNATTAG NTTNTTTTAA AATTAGNTTG TTTTAAATTN
AA
Translated Amino Acid Sequence VFJ281
<All Frames>
tlikk*THVHIKIKIKEKKMKRTIIILLFVSLFVTFVLSQIPDNDPELCQQRIQREDCPQ
TPVPWGTFNDNDEIEVYYMQAPVFEAVFGNFFGKLGGYHSAIGFYDLTTGLNYTAEYDAF
FEVGNGTLPNIINVDGKDELLWCNAGILCTVPYINETYWDKNIYSTASKTYMGTINGTQL
NQYIEWMQQYNISNPVYQT---
---LEIKXGXIXXIXERILSILGLXKXIXGXGXYXLLEXNXPFMXAKYXYIPXPGWPAXG
IDYEXGXFIXPX*xxlklxcfkx
Homology VFJ281 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
VFJ281 (VFJ281Q) /CSM/VF/VFJ2-D/VFJ281Q.Seq.d/ 1281 0.0
VHL857 (VHL857Q) /CSM/VH/VHL8-C/VHL857Q.Seq.d/ 1061 0.0
VFL220 (VFL220Q) /CSM/VF/VFL2-A/VFL220Q.Seq.d/ 1061 0.0
VFG895 (VFG895Q) /CSM/VF/VFG8-D/VFG895Q.Seq.d/ 1025 0.0
VFC480 (VFC480Q) /CSM/VF/VFC4-D/VFC480Q.Seq.d/ 991 0.0
SSA660 (SSA660Q) /CSM/SS/SSA6-C/SSA660Q.Seq.d/ 920 0.0
VFH286 (VFH286Q) /CSM/VF/VFH2-D/VFH286Q.Seq.d/ 890 0.0
SSG340 (SSG340Q) /CSM/SS/SSG3-B/SSG340Q.Seq.d/ 846 0.0
SSB231 (SSB231Q) /CSM/SS/SSB2-B/SSB231Q.Seq.d/ 821 0.0
SLE504 (SLE504Q) /CSM/SL/SLE5-A/SLE504Q.Seq.d/ 783 0.0
Homology VFJ281 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 1035 0.0 3
(BJ425060) Dictyostelium discoideum cDNA clone:ddv54b16, 5' ... 1059 0.0 1
(BJ415600) Dictyostelium discoideum cDNA clone:ddv23g06, 5' ... 1059 0.0 1
(BJ414588) Dictyostelium discoideum cDNA clone:ddv19a22, 5' ... 1059 0.0 1
(BJ413283) Dictyostelium discoideum cDNA clone:ddv14n24, 5' ... 1019 0.0 1
(BJ411824) Dictyostelium discoideum cDNA clone:ddv5p20, 5' e... 839 0.0 3
(BJ389934) Dictyostelium discoideum cDNA clone:dds20i16, 5' ... 769 0.0 2
(BJ417874) Dictyostelium discoideum cDNA clone:ddv15k22, 5' ... 932 0.0 1
(AU076369) Dictyostelium discoideum slug cDNA, clone SSA660. 920 0.0 1
(AU061512) Dictyostelium discoideum slug cDNA, clone SLE504. 781 0.0 2
Homology VFJ281 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q553W9) RecName: Full=Ceroid-lipofuscinosis neuronal protein 5 ... 348 2e-94
AC116305_28(AC116305|pid:none) Dictyostelium discoideum chromoso... 340 6e-92
AK032293_1(AK032293|pid:none) Mus musculus adult male olfactory ... 94 1e-17
AB528107_1(AB528107|pid:none) Synthetic construct DNA, clone: pF... 94 1e-17
BC025487_1(BC025487|pid:none) Mus musculus ceroid-lipofuscinosis... 94 1e-17
AK075109_1(AK075109|pid:none) Homo sapiens cDNA FLJ90628 fis, cl... 92 4e-17
AH014663_1(AH014663|pid:none) Canis lupus familiaris CLN5 (CLN5)... 90 2e-16
(Q5JZQ9) RecName: Full=Ceroid-lipofuscinosis neuronal protein 5;... 90 2e-16
(Q1ZYR0) RecName: Full=Ceroid-lipofuscinosis neuronal protein 5;... 89 2e-16
(A2TJ54) RecName: Full=Ceroid-lipofuscinosis neuronal protein 5;... 89 3e-16
Homology VFJ281 vs Genome
<more Genome info>
<List of Series> <Series: VFJ2-D> <Clone: VFJ281> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home