Dictyostelium discoideum cDNA Clone VFI324

Sequence VFI324

AATTTTATTT TATTTTTTTC TTTAACAATA ATAATAATAA TAATAATAAT
AATTATAACA ATAATAATAA AAAACAAATA CAATATATAT TAACAAATAA
ATGGCATTAG AACAAATAGA TTATGAATAT CAAAGTGGAT TTGGTAATCC
CTTTGAAAGT GAAGCAATTA AAGGAACATT ACCAAAGGGA AGAAATGCAC
CACAAAATTG TCCACTCGAT TTATATGCTG AACAACTCTC TGGTAATGCT
TTCACAGCAC CAAGACATAC CCAACAAAGA TCATGGTTAT ATCGTATTAG
ACCATCAGTT TGTCATACAC CACTTAAACC AATTGATTCA GGATTAGTTT
GTGATTTAAA TAATTTACAT GTTGATCCAA ATCAATTAAG ATGGAAACCA
TTCCCAATTA CAGAAGATAA ACCACACGAT TTCGTTGAGG GTCTCATTAC
AATCGCTGGT GCTGGTCATG CATCAGTACG TCATGGTCTT GCAATTCATA
TTTATACAGC AACAAAGAGT ATGGAAAATA AATCCTTTTA TAACTCTGAT
GGTGATTTCT TAATTGTACC ACAACAAGGT ACATTAGA-- --------GT
GAGATTTGTG TAATTCAAAG AGGTATTACA TTTAGTGTTA ATGTTGAAGG
ACCAACTAGA GGGTTATATT TGTGAGGTGT TTGGATCACA TTTTAAACTT
CCAGATTTAG GACCAATTGG TGCTAATGGT TTAGCAAATC CAAGAGATTT
CTTATCACCA GTTGCAGCCT ATGAAAAGAA GGAAGGTATT GAACATACAA
AGATTAATAA ATTCCTTGGA AAGTTATTTA GTGCAACACA AACCTACTCA
CCATTCAATG TTGTAGCATG GCATGGTAAC TATTGTCCAT ACAAGTATGA
TCTCAGTTTA TTCTGTGTAG TTAATTCGGT TTCATTTGAT CATTTGGATC
CATCGATTTT CACAGTTTTA ACAGCACCAA CCAATGAGGT GGGTGTTGCT
GCTGCTGATT TCGTAATTTT CCCACCACGT TGGTTGGTTC AAGAGAATAC
ATTTAGACCA CCATACTTTC ATCGTAATTG TATGTCTGAA TTTATGGGTT
TAATCCGTGG TGTCTATGAA GCAAAGAAAG AGGGTTTCTT ACCAGGTGGT
GGTAGTTTAC ACAGTTGTAT GACTCCACAT GGTCCTGACT CTGATACCTT
TTATGCCGCC ATTAAAGCTG AATTAAAACC AACTAAAATT CCAGATGTAG
CTTTAGCTTT CATGTTTGAA TCCTCTCTTA TTTTAGGTAT CTCTGATTAT
GCTAAAAAGA ATTTTATTG

Translated Amino Acid Sequence VFI324

ilfyffl*q********l*q***ktntiyink*MALEQIDYEYQSGFGNPFESEAIKGTL
PKGRNAPQNCPLDLYAEQLSGNAFTAPRHTQQRSWLYRIRPSVCHTPLKPIDSGLVCDLN
NLHVDPNQLRWKPFPITEDKPHDFVEGLITIAGAGHASVRHGLAIHIYTATKSMENKSFY
NSDGDFLIVPQQGTL---

---EICVIQRGITFSVNVEGPTRGLYL*gvwitf*tsrfrtnwc*wfskskrflitscsl
*kegry*tykd**ipwkvi*cntnlltiqccsmaw*llsiqv*sqfilcs*fgfi*sfgs
idfhsfnstnq*ggcccc*frnfpttlvgsreyi*ttilss*lyv*iygfnpwcl*sker
gfltrww*ftqlydstws*l*yllcrh*s*iktn*nsrcsfsfhv*ilsyfryl*lc*ke
fy

Homology VFI324 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFI324 (VFI324Q) /CSM/VF/VFI3-A/VFI324Q.Seq.d/                       2379   0.0
CFF213 (CFF213Q) /CSM/CF/CFF2-A/CFF213Q.Seq.d/                       1394   0.0
VFO668 (VFO668Q) /CSM/VF/VFO6-C/VFO668Q.Seq.d/                       1318   0.0
SLG663 (SLG663Q) /CSM/SL/SLG6-C/SLG663Q.Seq.d/                       1011   0.0
VFN835 (VFN835Q) /CSM/VF/VFN8-B/VFN835Q.Seq.d/                        981   0.0
VFL535 (VFL535Q) /CSM/VF/VFL5-B/VFL535Q.Seq.d/                        981   0.0
VFK866 (VFK866Q) /CSM/VF/VFK8-C/VFK866Q.Seq.d/                        967   0.0
VFN611 (VFN611Q) /CSM/VF/VFN6-A/VFN611Q.Seq.d/                        932   0.0
SHD714 (SHD714Q) /CSM/SH/SHD7-A/SHD714Q.Seq.d/                        767   0.0
VFB729 (VFB729Q) /CSM/VF/VFB7-B/VFB729Q.Seq.d/                        720   0.0

Homology VFI324 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AF189237|AF189237.1 Dictyostelium discoideum homogentisate 1...  1304   0.0    3
U95181|U95181.1 Caenorhabditis elegans 2,5 dihydroxyphenylac...    44   1e-22  7
BJ104989|BJ104989.1 Caenorhabditis elegans cDNA clone:yk1068...    52   9e-18  4
BJ132611|BJ132611.1 Caenorhabditis elegans cDNA clone:yk1068...    40   4e-16  6
AU216838|AU216838.1 Caenorhabditis elegans cDNA clone:yk842f...    40   4e-16  6
BJ147651|BJ147651.1 Caenorhabditis elegans cDNA clone:yk1253...    40   1e-14  6
AR146167|AR146167.1 Sequence 5 from patent US 6218169.             44   2e-14  6
CF828814|CF828814.1 UCRCR01_02C19_f Clementine Mandarin Albe...    48   2e-14  4
CB821504|CB821504.1 EST 2355 Half-Ripe Apricot Fruit Lambda ...    36   6e-12  5
CB404194|CB404194.1 OSTR019D10_2 AD-wrmcDNA Caenorhabditis e...    40   7e-12  5

Homology VFI324 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54QI4) RecName: Full=Homogentisate 1,2-dioxygenase;          E...   781   0.0
AF189237_1(AF189237|pid:none) Dictyostelium discoideum homogenti...   774   0.0
BC055029_1(BC055029|pid:none) Mus musculus homogentisate 1, 2-di...   471   e-131
(Q93099) RecName: Full=Homogentisate 1,2-dioxygenase;          E...   469   e-130
AF000573_1(AF000573|pid:none) Homo sapiens homogentisate 1,2-dio...   469   e-130
EU831603_1(EU831603|pid:none) Synthetic construct Homo sapiens c...   469   e-130
AK290782_1(AK290782|pid:none) Homo sapiens cDNA FLJ78087 complet...   468   e-130
GU589196_1(GU589196|pid:none) Ictalurus punctatus clone CBZB7022...   465   e-129
FJ515744_1(FJ515744|pid:none) Bos taurus homogentisate 1,2-dioxy...   457   e-127
BC080022_1(BC080022|pid:none) Xenopus laevis MGC82288 protein, m...   457   e-127

Homology VFI324 vs Genome