Dictyostelium discoideum cDNA Clone VFI192

Sequence VFI192

AGTTTGTATT GAGATTAAGG TTTTATAATA TAAAATGTCA AAAACTCCAG
CTAAACTTGT AGATTGTAGT TCAACCCTCA GCAGAGTTGG TAACCACCTC
CAAATGGGTG TTGTTGGTAT GCCAAATGTT GGTAAAAGTT CATTGTTCAA
TTTATTATGT AAAATGTCAA TTCCAGCTGA AAATTTCCCA TTTTGTACTA
TTGATCCAAA TTTATCACGT TGCGCTGTTC CAGATGAACG TTATACTTGG
TTATGTGAAC ATTGGAAACC AAAGAGTGAA GTCCCATCTT ATTTACAAAT
CACTGATATT GCTGGTTTAG TTAAAGGTGC TTCAACTGGT GCTGGTCTTG
GTAATGCTTT CCTTTCTCAC ATTCAACAAG TCGATGGTAT TTACCATATG
ATTCGTGCCT TTGAAAATGA TGAAATCATT CATGTTGAAG ATTCAGTCGA
CCCAGTCAGA GATTTAGATA TCATTTCAAA AGAATTAATT GCCAAAGATA
TTGAATTCAC AACTAAAGCT TTAAAAACTT TACAAACCTC TTTAAAAAAT
AAAACAATTG ATAAAGCTAA ACAAGTTGAA CTTGGTACTT ATAATAAAGT
TTTAGAATTA TTAGAATCAG GTAAACATGT AAGATATGGT ACTTATTCAA
ATGCTGAAAC TGAACATGTT CGTGATTTAC ATTTATTGAC ATCAAAACCA
GCAATTTATT TAATCAATCT TTCTGAAGAA GATTTCATTA GAAAGAAGAA
TAAATGGTTA GCAAAGATTA AAGCATGGGT TGATGAAAAT GGTGGTGGTA
CAATGATTCC AGTTTCAGTA AGTTTTGAAA AAGCTTTATT GGATTTATCT
TCAGATGATG AAAGAAAAGC ATATGAAAAA GAAAAAGGTG CAGTTAGTAT
TATGCCAAAA ATCATTAAAA CTGGTTACAG CACATTAAAT CTCATCAATT
TCTTTACATG TGGTAAAGAT GAAGTTAGAA GTTGGTGTTT ACAAAAAGGT
AACAAAGCTC CACAAGCTGC TGGTGTCATT CACACTGATT TCGAAAAAGG
TTTCATTATG GCTGAAACTA TGGCTTATTC TGACTTTTTC GAATTAAAAT
CTGAAGCTGA ATGTAAATCA AGAGGAAAAT ATAGAATGGA AGGTAAAAAC
TATGAAGTTG TTGATGGTGA TATTATTTTC TTCAAATTCA ACGTATCAAA
TAATAAGAAA AAATAAATAA ATAAATTAAA ATAATAAAAA

Translated Amino Acid Sequence VFI192

vcieikvl*YKMSKTPAKLVDCSSTLSRVGNHLQMGVVGMPNVGKSSLFNLLCKMSIPAE
NFPFCTIDPNLSRCAVPDERYTWLCEHWKPKSEVPSYLQITDIAGLVKGASTGAGLGNAF
LSHIQQVDGIYHMIRAFENDEIIHVEDSVDPVRDLDIISKELIAKDIEFTTKALKTLQTS
LKNKTIDKAKQVELGTYNKVLELLESGKHVRYGTYSNAETEHVRDLHLLTSKPAIYLINL
SEEDFIRKKNKWLAKIKAWVDENGGGTMIPVSVSFEKALLDLSSDDERKAYEKEKGAVSI
MPKIIKTGYSTLNLINFFTCGKDEVRSWCLQKGNKAPQAAGVIHTDFEKGFIMAETMAYS
DFFELKSEAECKSRGKYRMEGKNYEVVDGDIIFFKFNVSNNKKK*inklk**k

Homology VFI192 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFI192 (VFI192Q) /CSM/VF/VFI1-D/VFI192Q.Seq.d/                       2373   0.0
VFC844 (VFC844Q) /CSM/VF/VFC8-B/VFC844Q.Seq.d/                       2373   0.0
CFF767 (CFF767Q) /CSM/CF/CFF7-C/CFF767Q.Seq.d/                       2373   0.0
CFH382 (CFH382Q) /CSM/CF/CFH3-D/CFH382Q.Seq.d/                       2371   0.0
VFF322 (VFF322Q) /CSM/VF/VFF3-A/VFF322Q.Seq.d/                       2357   0.0
AFK414 (AFK414Q) /CSM/AF/AFK4-A/AFK414Q.Seq.d/                       2343   0.0
VFK212 (VFK212Q) /CSM/VF/VFK2-A/VFK212Q.Seq.d/                       2311   0.0
AFL465 (AFL465Q) /CSM/AF/AFL4-C/AFL465Q.Seq.d/                       2300   0.0
SFJ835 (SFJ835Q) /CSM/SF/SFJ8-B/SFJ835Q.Seq.d/                       2276   0.0
VFD215 (VFD215Q) /CSM/VF/VFD2-A/VFD215Q.Seq.d/                       2270   0.0

Homology VFI192 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


CQ730270|CQ730270.1 Sequence 16204 from Patent WO02068579.         46   1e-20  6
BC029376|BC029376.1 Homo sapiens hypothetical protein PTD004...    48   2e-15  5
AF134478|AF134478.1 Homo sapiens GTP-binding protein mRNA, c...    48   3e-15  5
BD227316|BD227316.1 Secreted proteins and polynucleotides en...    48   3e-15  5
CQ716350|CQ716350.1 Sequence 2284 from Patent WO02068579.          48   3e-15  5
AL833441|AL833441.1 Homo sapiens mRNA; cDNA DKFZp313H1942 (f...    48   4e-15  5
AX210655|AX210655.1 Sequence 297 from Patent WO0157058.            48   4e-15  5
BD248762|BD248762.1 GTPase associated proteins.                    48   4e-15  5
BC012842|BC012842.1 Homo sapiens hypothetical protein PTD004...    48   4e-15  5
BF699380|BF699380.1 602125956F1 NIH_MGC_56 Homo sapiens cDNA...    48   1e-14  4

Homology VFI192 vs Protein

Sequences producing significant alignments:                      (bits) Value


AP008214_456(AP008214|pid:none) Oryza sativa (japonica cultivar-...   418   e-115
BT040728_1(BT040728|pid:none) Zea mays full-length cDNA clone ZM...   417   e-115
BT052517_1(BT052517|pid:none) Medicago truncatula clone MTYFD_FE...   414   e-114
HH969608_1(HH969608|pid:none) Sequence 418 from Patent EP1641930.     412   e-113
BT097311_1(BT097311|pid:none) Soybean clone JCVI-FLGm-26K11 unkn...   411   e-113
CP001326_559(CP001326|pid:none) Micromonas sp. RCC299 chromosome...   410   e-112
(P91917) RecName: Full=Putative GTP-binding protein tag-210;  &T...   403   e-110
CP000589_33(CP000589|pid:none) Ostreococcus lucimarinus CCE9901 ...   402   e-110
FN357318_24(FN357318|pid:none) Schistosoma mansoni genome sequen...   401   e-110
AL844506_219(AL844506|pid:none) Plasmodium falciparum 3D7 chromo...   400   e-110

Homology VFI192 vs Genome