Homology VFI192 vs DNA
Query= VFI192 (VFI192Q) /CSM/VF/VFI1-D/VFI192Q.Seq.d/
(1240 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum22.seq; ddbjhum23.seq;
ddbjhum24.seq; ddbjhum3.seq; ddbjhum4.seq; ddbjhum5.seq; ddbjhum6.seq;
ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/a/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod10.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
ddbjrod7.seq; ddbjrod8.seq; ddbjrod9.seq;
/db/DDBJNEW.DATA/a/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/a/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; ddbjvrt4.seq; /db/DDBJNEW.DATA/a/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
ddbjinv6.seq; /db/DDBJNEW.DATA/a/new_ddbjinv.seq; ddbjpln1.seq;
ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq;
ddbjpln7.seq; ddbjpln8.seq; ddbjpln9.seq;
/db/DDBJNEW.DATA/a/new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq; ddbjbct7.seq;
/db/DDBJNEW.DATA/a/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/a/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/a/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss76.seq;
ddbjgss77.seq; ddbjgss78.seq; ddbjgss79.seq; ddbjgss8.seq;
ddbjgss80.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/a/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss2.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/a/new_ddbjhtg1.seq;
/db/DDBJNEW.DATA/a/new_ddbjhtg2.seq; ddbjpat1.seq; ddbjpat10.seq;
ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq;
ddbjpat7.seq; ddbjpat8.seq; ddbjpat9.seq;
/db/DDBJNEW.DATA/a/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/a/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/a/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/a/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/a/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
est_cint1.seq; est_drer1.seq; /db/DDBJNEW.DATA/a/new_est_drer1.seq;
est_dmel1.seq; /db/DDBJNEW.DATA/a/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/a/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/a/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/a/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/a/new_est_hvul1.seq; est_lesc1.seq;
est_mous1.seq; est_mous2.seq; est_mous3.seq;
/db/DDBJNEW.DATA/a/new_est_mous1.seq; est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/a/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/a/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/a/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/a/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/a/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; /db/DDBJNEW.DATA/a/new_est_rest1.seq
33,665,048 sequences; V,847,948,158 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
CQ730270|CQ730270.1 Sequence 16204 from Patent WO02068579. 46 1e-20 6
BC029376|BC029376.1 Homo sapiens hypothetical protein PTD004... 48 2e-15 5
AF134478|AF134478.1 Homo sapiens GTP-binding protein mRNA, c... 48 3e-15 5
BD227316|BD227316.1 Secreted proteins and polynucleotides en... 48 3e-15 5
CQ716350|CQ716350.1 Sequence 2284 from Patent WO02068579. 48 3e-15 5
AL833441|AL833441.1 Homo sapiens mRNA; cDNA DKFZp313H1942 (f... 48 4e-15 5
AX210655|AX210655.1 Sequence 297 from Patent WO0157058. 48 4e-15 5
BD248762|BD248762.1 GTPase associated proteins. 48 4e-15 5
BC012842|BC012842.1 Homo sapiens hypothetical protein PTD004... 48 4e-15 5
BF699380|BF699380.1 602125956F1 NIH_MGC_56 Homo sapiens cDNA... 48 1e-14 4
BC029207|BC029207.1 Mus musculus RIKEN cDNA 2810409H07 gene,... 54 4e-14 5
BC011318|BC011318.1 Mus musculus RIKEN cDNA 2810409H07 gene,... 54 4e-14 5
CE039500|CE039500.1 tigr-gss-dog-17000349762197 Dog Library ... 54 5e-14 3
AL136546|AL136546.1 Homo sapiens mRNA; cDNA DKFZp761C10121 (... 48 9e-14 5
BG180011|BG180011.1 602329562F1 NIH_MGC_91 Homo sapiens cDNA... 48 1e-13 3
BD127239|BD127239.1 Primer for synthesizing full-length cDNA... 48 1e-12 4
CQ782638|CQ782638.1 Sequence 2778 from Patent EP1396543. 48 1e-12 4
AK074710|AK074710.1 Homo sapiens cDNA FLJ90229 fis, clone NT... 48 1e-12 4
BD156155|BD156155.1 Primer for synthesizing full-length cDNA... 48 1e-12 4
AX876489|AX876489.1 Sequence 11394 from Patent EP1074617. 48 1e-12 4
AK027523|AK027523.1 Homo sapiens cDNA FLJ14617 fis, clone NT... 48 1e-12 4
AL021878|AL021878.2 Human DNA sequence from clone RP1-257I20... 46 2e-12 7
CB149170|CB149170.1 K-EST0205655 L15CKK1 Homo sapiens cDNA c... 48 8e-12 3
BE871220|BE871220.1 601448907F1 NIH_MGC_65 Homo sapiens cDNA... 48 1e-11 3
BG195974|BG195974.1 RST15057 Athersys RAGE Library Homo sapi... 48 1e-11 3
BQ429573|BQ429573.1 AGENCOURT_7901657 NIH_MGC_82 Homo sapien... 48 1e-11 3
CD114066|CD114066.1 ME1-0032P-A116-F12-U.G ME1-0032 Schistos... 44 1e-11 4
BG291021|BG291021.1 602386819F1 NIH_MGC_93 Homo sapiens cDNA... 48 2e-11 3
BG776327|BG776327.1 602663404F1 NIH_MGC_59 Homo sapiens cDNA... 48 2e-11 3
BQ437576|BQ437576.1 AGENCOURT_7919362 NIH_MGC_72 Homo sapien... 48 2e-11 3
BE882408|BE882408.1 601509441F1 NIH_MGC_71 Homo sapiens cDNA... 48 2e-11 3
BM459495|BM459495.1 AGENCOURT_6418051 NIH_MGC_71 Homo sapien... 48 2e-11 3
BX409503|BX409503.2 human full-length cDNA 5-PRIME end of cl... 48 2e-11 3
BU193440|BU193440.1 AGENCOURT_7953878 NIH_MGC_67 Homo sapien... 48 2e-11 3
BU153781|BU153781.1 AGENCOURT_7827865 NIH_MGC_67 Homo sapien... 48 2e-11 3
BF984613|BF984613.1 602309945F1 NIH_MGC_88 Homo sapiens cDNA... 48 2e-11 3
BG164685|BG164685.1 602341789F1 NIH_MGC_89 Homo sapiens cDNA... 48 2e-11 3
BX432109|BX432109.2 human full-length cDNA 3-PRIME end of cl... 48 2e-11 3
BX430769|BX430769.1 human full-length cDNA 5-PRIME end of cl... 48 2e-11 3
AL568510|AL568510.2 human full-length cDNA 3-PRIME end of cl... 48 2e-11 3
BX333036|BX333036.2 human full-length cDNA 3-PRIME end of cl... 48 2e-11 3
BM452663|BM452663.1 AGENCOURT_6401360 NIH_MGC_85 Homo sapien... 48 2e-11 3
BX397425|BX397425.2 human full-length cDNA 3-PRIME end of cl... 48 2e-11 3
AX188365|AX188365.1 Sequence 4060 from Patent WO0142467. 48 4e-11 3
CD080433|CD080433.1 MA3-9999U-M309-H09-U.B MA3-0001 Schistos... 44 5e-11 3
BF936899|BF936899.1 EST459954 Schistosoma mansoni female, Ph... 44 5e-11 3
AI975066|AI975066.1 EST269660 Schistosoma mansoni female, Ph... 44 5e-11 3
CD120224|CD120224.1 ME1-0060T-D149-F02-U.G ME1-0060 Schistos... 44 5e-11 3
CQ342193|CQ342193.1 Sequence 16287 from Patent WO0157275. 46 8e-11 3
CQ304966|CQ304966.1 Sequence 16071 from Patent WO0186003. 46 8e-11 3
CQ267940|CQ267940.1 Sequence 16201 from Patent WO0157277. 46 8e-11 3
CQ206396|CQ206396.1 Sequence 8673 from Patent WO0157271. 46 8e-11 3
CQ182018|CQ182018.1 Sequence 13414 from Patent WO0157274. 46 8e-11 3
CQ146578|CQ146578.1 Sequence 16600 from Patent WO0157276. 46 8e-11 3
CQ107938|CQ107938.1 Sequence 16797 from Patent WO0157272. 46 8e-11 3
CQ076942|CQ076942.1 Sequence 12742 from Patent WO0157278. 46 8e-11 3
CQ057655|CQ057655.1 Sequence 8475 from Patent WO0157270. 46 8e-11 3
AC117987|AC117987.2 Felis catus clone RP86-72J15, WORKING DR... 54 4e-10 8
BH136432|BH136432.1 ENTOB10TF Entamoeba histolytica Sheared ... 54 4e-10 4
AI264998|AI264998.1 uk01c09.y1 Schiller mouse MAC13 Mus musc... 54 1e-09 3
AW744499|AW744499.1 ur33h07.y1 Soares_mouse_NMBP Mus musculu... 54 1e-09 3
AL515790|AL515790.3 human full-length cDNA 3-PRIME end of cl... 46 1e-09 3
CD564694|CD564694.1 B0483C01-5 NIA Mouse E6.5 Whole Embryo c... 54 1e-09 3
BI863769|BI863769.1 kx48b08.y1 Parastrongyloides trichosuri ... 70 2e-09 2
CB057501|CB057501.1 NISC_js05d02.w1 Soares NMBP1 Mus musculu... 54 2e-09 3
CD120268|CD120268.1 ME1-0060T-D150-C08-U.G ME1-0060 Schistos... 44 3e-09 3
AV099978|AV099978.1 Mus musculus ES cell cDNA, partial seque... 54 3e-09 2
BB360855|BB360855.1 Mus musculus 16 days embryo head cDNA, R... 54 4e-09 2
BX349638|BX349638.2 human full-length cDNA 3-PRIME end of cl... 46 4e-09 3
AV302971|AV302971.1 Mus musculus 8 days embryo cDNA, RIKEN f... 54 5e-09 2
BE866155|BE866155.1 601679073F1 NIH_MGC_53 Homo sapiens cDNA... 46 1e-08 3
CD235701|CD235701.1 SS1_37_E02.b1_A012 Salt-stressed seedlin... 62 2e-08 3
CD211097|CD211097.1 HS1_61_A04.b1_A012 Heat-shocked seedling... 62 2e-08 3
AL516522|AL516522.3 human full-length cDNA 5-PRIME end of cl... 48 2e-08 3
CB928193|CB928193.1 ABA1_37_D03.b1_A012 Abscisic acid-treate... 62 2e-08 3
CD208339|CD208339.1 HS1_37_E12.b1_A012 Heat-shocked seedling... 62 2e-08 3
CD229002|CD229002.1 CCC1_11_H09.b1_A007 Callus culture/cell ... 62 2e-08 3
BU718816|BU718816.1 SJM2CNF09 SJM Schistosoma japonicum cDNA... 48 3e-08 4
BB767591|BB767591.1 Mus musculus B16 F10Y cells cDNA, RIKEN ... 36 3e-08 5
CF071735|CF071735.1 FE1_18_H12.b1_A002 Iron-deficient seedli... 62 3e-08 3
BU723242|BU723242.1 SJMASG10 SJM Schistosoma japonicum cDNA ... 48 4e-08 4
BX419580|BX419580.2 human full-length cDNA 5-PRIME end of cl... 48 5e-08 3
W04164|W04164.1 za54e12.r1 Soares fetal liver spleen 1NFLS H... 48 9e-08 2
N35525|N35525.1 yx61b02.r1 Soares melanocyte 2NbHM Homo sapi... 48 9e-08 2
BM835735|BM835735.1 K-EST0110966 S11SNU1 Homo sapiens cDNA c... 48 1e-07 2
BU719241|BU719241.1 SJM2CSB07 SJM Schistosoma japonicum cDNA... 48 1e-07 4
AC108177|AC108177.2 Felis catus clone RP86-110N16, WORKING D... 54 1e-07 2
AI874354|AI874354.1 tz64g05.x1 NCI_CGAP_Ov35 Homo sapiens cD... 48 1e-07 2
CK825204|CK825204.1 ig47a12.x5 HR85 islet Homo sapiens cDNA ... 48 1e-07 2
BQ486901|BQ486901.1 1091049E05.x1 1091 - Immature ear with c... 66 1e-07 2
AA608631|AA608631.1 ae55a05.s1 Stratagene lung carcinoma 937... 48 1e-07 2
BX347927|BX347927.2 human full-length cDNA 5-PRIME end of cl... 48 1e-07 2
BM310676|BM310676.1 ig47a12.y1 HR85 islet Homo sapiens cDNA ... 48 1e-07 2
AV716790|AV716790.1 Homo sapiens cDNA clone:DCBAZC03, 5'end,... 48 1e-07 2
BX326642|BX326642.2 human full-length cDNA 3-PRIME end of cl... 48 2e-07 2
AX829558|AX829558.1 Sequence 278 from Patent WO03072602. 50 2e-07 4
AX818528|AX818528.1 Sequence 278 from Patent EP1338608. 50 2e-07 4
AX595870|AX595870.1 Sequence 1524 from Patent EP1258494. 50 2e-07 4
AP003193|AP003193.2 Clostridium perfringens str. 13 DNA, com... 36 2e-07 18
BQ932977|BQ932977.1 AGENCOURT_8826226 Lupski_sciatic_nerve H... 48 2e-07 2
>CQ730270|CQ730270.1 Sequence 16204 from Patent WO02068579.
Length = 1739
Score = 46.1 bits (23), Expect(6) = 1e-20
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1028 attcacactgatttcgaaaaaggtttcattatggctgaa 1066
|||||||| ||||| ||||| || |||||||||||||||
Sbjct: 1111 attcacacagattttgaaaagggattcattatggctgaa 1149
Score = 44.1 bits (22), Expect(6) = 1e-20
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 716 aatctttctgaagaagatttcattagaaagaagaataaatgg 757
|||||||||||| |||| | |||||||||||| || ||||||
Sbjct: 799 aatctttctgaaaaagactacattagaaagaaaaacaaatgg 840
Score = 36.2 bits (18), Expect(6) = 1e-20
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 404 cgtgcctttgaaaatgatgaaatcattcatgttgaaga 441
||||| |||||| ||||||| |||| |||||||||||
Sbjct: 486 cgtgcttttgaagatgatgatatcacacatgttgaaga 523
Score = 36.2 bits (18), Expect(6) = 1e-20
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 174 cagctgaaaatttcccattttgtactattgatcc 207
|||| ||||| |||||||| || |||||||||||
Sbjct: 256 cagcagaaaacttcccattctgcactattgatcc 289
Score = 36.2 bits (18), Expect(6) = 1e-20
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 1163 gatggtgatattattttcttcaaatt 1188
||||| |||||||| |||||||||||
Sbjct: 1246 gatggagatattatcttcttcaaatt 1271
Score = 30.2 bits (15), Expect(6) = 1e-20
Identities = 27/31 (87%)
Strand = Plus / Plus
Query: 102 aaatgggtgttgttggtatgccaaatgttgg 132
|||| ||| ||||||| |||||||||||||
Sbjct: 184 aaattggtattgttggattgccaaatgttgg 214
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 43,669,292
Number of Sequences: 33665048
Number of extensions: 43669292
Number of successful extensions: 3727734
Number of sequences better than 10.0: 1636
length of query: 1240
length of database: V,847,948,158
effective HSP length: 23
effective length of query: 1217
effective length of database: V,073,652,054
effective search space: 46335634549718
effective search space used: 46335634549718
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home