Dictyostelium discoideum cDNA Clone VFI185

Sequence VFI185

CTGTTGGCCT ACTGGTAAAT ATTTATNCCA AATATAATAT AATACTAATT
TAATAATTTT AATTTTTTTA ATTATTTAGA TTAGTTTTAA TTTTTTTTTT
TTNATATTAN AATTCCCTC- ---------A CTATGGTGAT TTAAATCATC
TCATCTCATC AGTTATGTCT GGTATCACCT GTTGTCTTCG TTTCCCAGGT
CAATTGAACT CTGATCTTCG TAAATTAGCT GTAAATTTAA TTCCATTCCC
ACGTCTTCAC TTCTTTTTGG TTGGTTTCGC TCCACTCACT GCCAAAGGTG
CCTCGTCATA CAATCGTATC ACCGTACCAG AACTCACCCA ACAAATGTTT
GATGCCAAGA ATATGATGGC TGCTTCCGAT CCACACAATG GTAAATACTT
GACTGCCTCT GCTCTCTTTA GAGGTAAAAT CTTCACCAAG GAAGTCGATG
AACAAATGCA CAACATTCAA ACCAAAAATA GCAGTTACTT TGTCGAATGG
ATTCCACACA ACATTAAATC CTCCATTTGT GATATCCCAC CAAAAGGTAC
CCCAATGGCC GTCACCTTCA TCGGTAACAA CACTGCCATC CAAGATCTCT
TCAAACGTAT CTCAATTCAC TTCCAAGCTA TGTTCCGTAG AAAGGCTTTC
CTTCATTGGT ACACCCTCGA AGGTATGGAA GAATTGGAAT TTACTGAAGC
TGAATCAAAC ATGAACGATT TAGTTTACGA ATATCAACAA TATTCTAACC
AAGAAACGAA GAAGATGGTG GNAATATCAA GAAGAACATA AGAACANAAG
AACAAGC

Translated Amino Acid Sequence VFI185

vgllvniyxkyniili**f*ff*LFRLVLIFFFXYXNSL---

---YGDLNHLISSVMSGITCCLRFPGQLNSDLRKLAVNLIPFPRLHFFLVGFAPLTAKGA
SSYNRITVPELTQQMFDAKNMMAASDPHNGKYLTASALFRGKIFTKEVDEQMHNIQTKNS
SYFVEWIPHNIKSSICDIPPKGTPMAVTFIGNNTAIQDLFKRISIHFQAMFRRKAFLHWY
TLEGMEELEFTEAESNMNDLVYEYQQYSNQETKKMVXISRRT*exknk

Homology VFI185 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFI534 (VFI534Q) /CSM/VF/VFI5-B/VFI534Q.Seq.d/                       1332   0.0
VFI185 (VFI185Q) /CSM/VF/VFI1-D/VFI185Q.Seq.d/                       1332   0.0
VFC748 (VFC748Q) /CSM/VF/VFC7-B/VFC748Q.Seq.d/                       1326   0.0
SFC259 (SFC259Q) /CSM/SF/SFC2-C/SFC259Q.Seq.d/                       1318   0.0
VFC612 (VFC612Q) /CSM/VF/VFC6-A/VFC612Q.Seq.d/                       1312   0.0
VFM545 (VFM545Q) /CSM/VF/VFM5-B/VFM545Q.Seq.d/                       1304   0.0
SFK751 (SFK751Q) /CSM/SF/SFK7-C/SFK751Q.Seq.d/                       1304   0.0
VFF673 (VFF673Q) /CSM/VF/VFF6-D/VFF673Q.Seq.d/                       1302   0.0
CFH427 (CFH427Q) /CSM/CF/CFH4-B/CFH427Q.Seq.d/                       1279   0.0
SFC729 (SFC729Q) /CSM/SF/SFC7-B/SFC729Q.Seq.d/                       1154   0.0

Homology VFI185 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


L14000|L14000.1 Dictyostelium discoideum beta tubulin (TUBB)...  1245   0.0    3
AF030823|AF030823.1 Dictyostelium discoideum beta tubulin ge...  1245   0.0    3
AF276947|AF276947.1 Polysphondylium violaceum beta-tubulin g...   180   e-135  4
X12768|X12768.1 Tetrahymena pyriformis beta-tubulin gene 1 (...    86   1e-69  8
CD088322|CD088322.1 MC1-0049T-M155-C01-U.B MC1-0049 Schistos...    80   2e-66  8
AF510209|AF510209.1 Uroleptus gallina beta-tubulin gene, com...    88   3e-64  8
CD431468|CD431468.1 ETH1_9_D12.b1_A002 Ethylene-treated seed...   119   5e-63  6
X06653|X06653.1 Stylonychia macronuclear beta-1 tubulin gene.      78   2e-57  7
AF510208|AF510208.1 Stylonychia lemnae beta-tubulin gene, co...    78   2e-57  7
AY188878|AY188878.1 Streblomastix strix clone 5 beta-tubulin...    86   7e-56  5

Homology VFI185 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P32256) RecName: Full=Tubulin beta chain; AltName: Full=Beta-tu...   430   e-119
L14000_1(L14000|pid:none) Dictyostelium discoideum beta tubulin ...   430   e-119
A44848(A44848)beta 1A tubulin - slime mold (Physarum polycephalum)    358   2e-97
AF182554_1(AF182554|pid:none) Euglena gracilis beta-tubulin mRNA...   355   1e-96
AB576857_1(AB576857|pid:none) Tsukubamonas globosa mRNA for beta...   352   1e-95
(P41352) RecName: Full=Tubulin beta chain; AltName: Full=Beta-tu...   352   1e-95
(P34108) RecName: Full=Tubulin beta chain; AltName: Full=Beta-tu...   352   1e-95
S01769(S01769)tubulin beta-2 chain - Tetrahymena pyriformis           350   4e-95
X12769_1(X12769|pid:none) Tetrahymena pyriformis beta-tubulin ge...   350   4e-95
JQ0120(JQ0120) tubulin beta chain - malaria parasite (Plasmodium...   350   5e-95

Homology VFI185 vs Genome