Dictyostelium discoideum cDNA Clone VFG722

Sequence VFG722

AAATTTATTT CACAAAAAGT ATAATACAAG ATGGGTAAAG AAAAAACACA
TATTAATATC GTCGTTATTG GTCACGTAGA TGCTGGTAAA TCAACCACCA
CTGGTCATTT AATCTACAAA TGTGGTGGTA TCGATAAAAG AGTTATCGAA
AAATACGAAA AGGAAGCTTC TGAAATGGGT AAACAATCAT TCAAATATGC
TTGGGTTATG GATAAATTAA AAGCTGAACG TGAAAGAGGT ATTACCATCG
ATATTGCTTT ATGGAAATTC GAAACCTCAA AATACTACTT CACCATTATT
GATGCTCCAG GTCACAGAGA TTTCATCAAG AATATGATTA CTGGTACCTC
ACAAGCCGAT TGTGCTGTCT TAGTCATTGC CTCCCCAACT GGTGAGTTCG
AAGCTGGTAT TGCCAAGAAC GGTCAAACTC GTGAACACGC TCTCCTTGCT
TACACTTTAG GTGTCAAACA AATGATCGTT GCTATCAACA AGATGGATGA
AAAATCAACC AACTACTCAC AAGCCCGTTA CGACGAAATT GTCAAAGAAG
TTTCATCTTT CATTAAAAA- ---------C CCTCGATGCC ATCGTCGAAC
CAAAACGTCC ACACGATAAA CCATTACGTA TTCCATTACA AGATGTCTAC
AAGATCGGTG GTATCGGTAC TGTTCCAGTA GGTCGTGTCG AAACTGGTAT
CATTAAACCA GGTATGGTCG TCACCTTTGC CCCAGCTGGT CTCTCAACTG
AAGTTAAATC AGTCGAAATG CATCACGAAC AACTCCCAGA AGCCCGTCCA
GGTGACAATG TAGGTTTCAA CGTTAAAAAC GTTTCAGTCA AAGAAATTAA
AAGAGGTATG GTCGCTGGTG ACTCCAAAAA CGATCCACCA CAAGAAACTG
AAAAATTCGT TGCTCAAGTT ATCGTCCTCA ACCATCCAGG TCAAATCCAT
GCTGGTTACT CACCAGTCTT AGATTGTCAC ACTGCTCACA TTGCCTGTAA
ATTCACTGAA ATCGTCGATA AAGTTGATCG TCGTACTGGT GCCGTCGTTG
CCAAAGAAGG TACTGCCGCC GTCGTCTTAA AGAATGGTGA TGCTGCTATG
GTCGAATTAA CCCCATCTCA TCCAATGTGT GTTGAATCAT TCACTGAATA
CCCACCATTA GGTCGTTTCG CCGTCAGAGA TATGAGACAA ACCGTTGCCG
TCGGTGTCAT CAAATCAACC GTCAAGAAAG CCCCAGGTAA AGCAGGTATA
AGAAAGGTGC TGCTGCTCCA TCAAAGAAGA AATAAATAAT TNAAAAAAAA
TTTTATATAT CTAAAA

Translated Amino Acid Sequence VFG722

kfisqkv*YKMGKEKTHINIVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKYEKEASEMG
KQSFKYAWVMDKLKAERERGITIDIALWKFETSKYYFTIIDAPGHRDFIKNMITGTSQAD
CAVLVIASPTGEFEAGIAKNGQTREHALLAYTLGVKQMIVAINKMDEKSTNYSQARYDEI
VKEVSSFIK---

---LDAIVEPKRPHDKPLRIPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGLSTE
VKSVEMHHEQLPEARPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLN
HPGQIHAGYSPVLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELT
PSHPMCVESFTEYPPLGRFAVRDMRQTVAVGVIKSTVKKAPGKAGIRKVLLLHQRRNK*x
kknfiylk

Homology VFG722 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFG722 (VFG722Q) /CSM/VF/VFG7-A/VFG722Q.Seq.d/                       2500   0.0
VFE185 (VFE185Q) /CSM/VF/VFE1-D/VFE185Q.Seq.d/                       2464   0.0
CFB884 (CFB884Q) /CSM/CF/CFB8-D/CFB884Q.Seq.d/                       1392   0.0
CFB539 (CFB539Q) /CSM/CF/CFB5-B/CFB539Q.Seq.d/                       1392   0.0
CFA439 (CFA439Q) /CSM/CF/CFA4-B/CFA439Q.Seq.d/                       1392   0.0
CFC844 (CFC844Q) /CSM/CF/CFC8-B/CFC844Q.Seq.d/                       1390   0.0
CHE287 (CHE287Q) /CSM/CH/CHE2-D/CHE287Q.Seq.d/                       1388   0.0
VFD312 (VFD312Q) /CSM/VF/VFD3-A/VFD312Q.Seq.d/                       1386   0.0
VFD847 (VFD847Q) /CSM/VF/VFD8-B/VFD847Q.Seq.d/                       1384   0.0
CHB274 (CHB274Q) /CSM/CH/CHB2-D/CHB274Q.Seq.d/                       1384   0.0

Homology VFG722 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


X55972|X55972.1 D. discoideum EF1-II gene for elongation fac...  1308   0.0    2
X55973|X55973.1 D. discoideum EF1-I gene for elongation fact...  1277   0.0    2
AF016242|AF016242.1 Dictyostelium discoideum protein synthes...  1164   0.0    2
M29934|M29934.1 C.albicans elongation factor 1-alpha (TEF-1)...   260   0.0    9
M29935|M29935.1 C.albicans elongation factor 1-alpha (TEF-2)...   236   e-180  9
AF402092|AF402092.1 Pichia anomala strain NRRL Y-366 transla...   224   e-161  8
AX109715|AX109715.1 Sequence 448 from Patent WO0123604.           192   e-157  9
AX109714|AX109714.1 Sequence 447 from Patent WO0123604.           188   e-156  9
AF402023|AF402023.1 Kluyveromyces piceae strain NRRL Y-17977...   204   e-146  6
AX109679|AX109679.1 Sequence 412 from Patent WO0123604.           155   e-146  7

Homology VFG722 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P18624) RecName: Full=Elongation factor 1-alpha;          Short...   446   0.0
X55973_1(X55973|pid:none) D. discoideum EF1-I gene for elongatio...   446   0.0
X55972_1(X55972|pid:none) D. discoideum EF1-II gene for elongati...   446   0.0
EU360789_1(EU360789|pid:none) Acytostelium leptosomum elongation...   390   0.0
EU360785_1(EU360785|pid:none) Dictyostelium medusoides elongatio...   378   0.0
EU360787_1(EU360787|pid:none) Dictyostelium rhizopodium elongati...   368   0.0
EF513183_1(EF513183|pid:none) Arcyria stipata elongation factor ...   355   0.0
GQ377695_1(GQ377695|pid:none) Arachnula sp. CL12 elongation fact...   346   0.0
EF513195_1(EF513195|pid:none) Lepidoderma tigrinum elongation fa...   338   e-177
EU544543_1(EU544543|pid:none) Semimorula liquescens elongation f...   331   e-176

Homology VFG722 vs Genome