Dictyostelium discoideum cDNA Clone VFG695

Sequence VFG695

AAATTTTTTT TAGAAAAACT AAAAAAAAAA CCTCAAACAA TTAATACAAA
ATGGTAAACA TTGGTGGAAC TCAAGAAAAA TGTACTGCAT GTGCTAAAAC
TGTATACTTA ACAGAAAAGA TTGTAGTTGA AGATAAAGAA GATAAGAAAA
CTTTCCACAA ATTATGTTTA AAATGTACTC ACTGTAAGCT TACATTAAGT
CTTGGTAACT ATGCATCATT AAATGGNGTA TTCTATTGTA AACCACATTT
CAAACAATTA TTCGCCACCA AAGGTAACTA CGATGAAGGT TTCGGTAAAT
CAAAACATTC TGAAAAATGG ACACCACAAG CCACCCCAAC TGGTACTTCT
TCATTCATTC CAGTTGAAGA ATCAAAATCA TCAGAAAAGA AAGAAACACC
AACAACAATT TCATCAAAAT TCTCAGGATC AACTGAAAAA TGTAATCTCT
GTAATAAGAC AGTATATTTA ACAGGAAAGA TTGTTGTTGA AGATAAAGAA
GATAAGAAAG TATTACATAA ACAATGTTTG AAATGTACAC ATTGTAGNGT
TGTATTAAAT CTTGGTACCT ATGCATCAAT GAAAGGTGTA TTCTATTGTA
AACCACATTT CAAACAATTA TTCGCCACCA AAGGTAACTA TGATGAAAGN
TTTGGTAA-- --------TT GANAGATTTN AAAATATTAA CAATGATGAT
TNTGATAAAC CAANAAGNCA ACNACAACCN GTTTNTCAAC CANAANAANA
ACNNCNACNA CAANAANAAN AAAAAGTTNA ANAACCNATC NCTGAANAAN
AANAAAAAGT TGAANAAAAA GTTGAAGAAC C

Translated Amino Acid Sequence VFG695

iffrktkkktsnn*YKMVNIGGTQEKCTACAKTVYLTEKIVVEDKEDKKTFHKLCLKCTH
CKLTLSLGNYASLNGVFYCKPHFKQLFATKGNYDEGFGKSKHSEKWTPQATPTGTSSFIP
VEESKSSEKKETPTTISSKFSGSTEKCNLCNKTVYLTGKIVVEDKEDKKVLHKQCLKCTH
CXVVLNLGTYASMKGVFYCKPHFKQLFATKGNYDEXFG---

---LXDXKILTMMIXINQXXNXNXFXNXXXNXXXXXXKKXXNXSLXXXKKLXKKLKN

Homology VFG695 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFG695 (VFG695Q) /CSM/VF/VFG6-D/VFG695Q.Seq.d/                       1289   0.0
AFG415 (AFG415Q) /CSM/AF/AFG4-A/AFG415Q.Seq.d/                       1217   0.0
AFG661 (AFG661Q) /CSM/AF/AFG6-C/AFG661Q.Seq.d/                       1211   0.0
AFK438 (AFK438Q) /CSM/AF/AFK4-B/AFK438Q.Seq.d/                       1207   0.0
AFE756 (AFE756Q) /CSM/AF/AFE7-C/AFE756Q.Seq.d/                       1207   0.0
AFA860 (AFA860Q) /CSM/AF/AFA8-C/AFA860Q.Seq.d/                       1207   0.0
SFF706 (SFF706Q) /CSM/SF/SFF7-A/SFF706Q.Seq.d/                       1205   0.0
SFE749 (SFE749Q) /CSM/SF/SFE7-C/SFE749Q.Seq.d/                       1205   0.0
AFN295 (AFN295Q) /CSM/AF/AFN2-D/AFN295Q.Seq.d/                       1205   0.0
AFL234 (AFL234Q) /CSM/AF/AFL2-B/AFL234Q.Seq.d/                       1205   0.0

Homology VFG695 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AL929351|AL929351.1 Plasmodium falciparum strain 3D7, chromo...    34   4e-04  13
BE858201|BE858201.1 7g19d02.x1 NCI_CGAP_Brn23 Homo sapiens c...    52   0.013  1
AL035476|AL035476.7 Plasmodium falciparum MAL4P3.                  32   0.031  12
AC117081|AC117081.2 Dictyostelium discoideum chromosome 2 ma...    34   0.034  9
BI504534|BI504534.1 BB170004B20D05.5 Bee Brain Normalized/Su...    38   0.041  2
AC114918|AC114918.4 Mus musculus BAC clone RP23-86N20 from 5...    44   0.056  4
AC128910|AC128910.3 Rattus norvegicus clone CH230-324O17, **...    38   0.12   7
AC128255|AC128255.2 Rattus norvegicus clone CH230-42J13, ***...    34   0.14   7
AC126019|AC126019.15 Medicago truncatula clone mth2-22p22, c...    34   0.16   7
BX322647|BX322647.8 Zebrafish DNA sequence *** SEQUENCING IN...    36   0.17   11

Homology VFG695 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF184886_1(AF184886|pid:none) Nicotiana tabacum LIM domain prote...   119   3e-25
GQ901953_1(GQ901953|pid:none) Hevea brasiliensis LIM1 mRNA, comp...   117   7e-25
AC135208_4(AC135208|pid:none) Oryza sativa (japonica cultivar-gr...   117   1e-24
EF035040_1(EF035040|pid:none) Populus tremula x Populus alba LIM...   116   1e-24
EF146377_1(EF146377|pid:none) Populus trichocarpa clone WS0117_L...   116   1e-24
AM469183_1(AM469183|pid:none) Vitis vinifera contig VV78X221882....   116   1e-24
AC004665_22(AC004665|pid:none) Arabidopsis thaliana chromosome 2...   115   3e-24
EF148212_1(EF148212|pid:none) Populus trichocarpa clone WS0128_M...   115   3e-24
AK317129_1(AK317129|pid:none) Arabidopsis thaliana AT3G55770 mRN...   113   1e-23
AF443117_1(AF443117|pid:none) Gossypium hirsutum LIM domain prot...   113   1e-23

Homology VFG695 vs Genome