Homology VFF438 vs DNA
Query= VFF438 (VFF438Q) /CSM/VF/VFF4-B/VFF438Q.Seq.d/
(1248 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
new_ddbjhum.seq; ddbjpri.seq; new_ddbjpri.seq; ddbjrod1.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
new_ddbjrod.seq; ddbjmam.seq; new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; new_ddbjvrt.seq; ddbjinv1.seq; ddbjinv2.seq;
ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; new_ddbjinv.seq;
ddbjpln1.seq; ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq;
ddbjpln6.seq; new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq; ddbjvrl3.seq;
new_ddbjvrl.seq; ddbjphg.seq; new_ddbjphg.seq; ddbjuna.seq;
new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq; ddbjgss11.seq;
ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq; ddbjgss15.seq;
ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq; ddbjgss19.seq;
ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq; ddbjgss22.seq;
ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq; ddbjgss26.seq;
ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq; ddbjgss3.seq;
ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq; ddbjgss33.seq;
ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq; ddbjgss37.seq;
ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq; ddbjgss40.seq;
ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq; ddbjgss44.seq;
ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq; ddbjgss48.seq;
ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq; ddbjgss51.seq;
ddbjgss52.seq; ddbjgss53.seq; ddbjgss6.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; new_ddbjgss1.seq; new_ddbjgss2.seq;
new_ddbjgss3.seq; new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; new_ddbjhtg1.seq; new_ddbjhtg2.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; new_ddbjpat.seq; ddbjsts1.seq;
ddbjsts2.seq; new_ddbjsts.seq; ddbjsyn.seq; new_ddbjsyn.seq;
est_atha1.seq; new_est_atha1.seq; est_cele1.seq; new_est_cele1.seq;
est_drer1.seq; new_est_drer1.seq; est_dmel1.seq; new_est_dmel1.seq;
est_gmax1.seq; new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; new_est_hum1.seq; est_lesc1.seq;
new_est_lesc1.seq; est_mous1.seq; est_mous2.seq; est_mous3.seq;
new_est_mous1.seq; est_osat1.seq; new_est_osat1.seq; est_rnor1.seq;
new_est_rnor1.seq; est_xlae1.seq; new_est_xlae1.seq; est_zmay1.seq;
new_est_zmay1.seq; est_rest1.seq; est_rest2.seq; new_est_rest1.seq
25,022,185 sequences; P,692,356,608 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AX344565|AX344565.1 Sequence 16 from Patent WO0200932. 38 3e-06 9
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, ... 34 3e-05 14
AE014849|AE014849.1 Plasmodium falciparum 3D7 chromosome 12... 36 7e-04 7
AC021132|AC021132.5 Homo sapiens chromosome 8 clone RP11-38... 42 0.002 7
AE014820|AE014820.1 Plasmodium falciparum 3D7 chromosome 14... 38 0.002 7
AL049184|AL049184.5 Plasmodium falciparum DNA *** SEQUENCIN... 50 0.002 7
AL929358|AL929358.1 Plasmodium falciparum strain 3D7, chrom... 36 0.002 7
AC004688|AC004688.8 Plasmodium falciparum chromosome 12 clo... 34 0.002 9
AE014825|AE014825.1 Plasmodium falciparum 3D7 chromosome 14... 34 0.003 9
AC055711|AC055711.18 Homo sapiens 3 BAC RP11-67E18 (Roswell... 40 0.003 8
AC144431|AC144431.6 Medicago truncatula clone mth2-21i14, W... 36 0.004 10
AL592203|AL592203.4 Human DNA sequence from clone RP11-268N... 34 0.004 10
Z83839|Z83839.1 Human DNA sequence from clone RP1-127L4 on ... 36 0.005 4
AL928901|AL928901.8 Zebrafish DNA sequence from clone CH211... 40 0.005 7
BX276103|BX276103.13 Zebrafish DNA sequence from clone DKEY... 36 0.005 10
AL844506|AL844506.1 Plasmodium falciparum chromosome 7. 42 0.006 6
AC106575|AC106575.7 Rattus norvegicus clone CH230-69L1, ***... 38 0.006 6
BX511090|BX511090.2 Zebrafish DNA sequence *** SEQUENCING I... 34 0.006 7
AC027303|AC027303.3 Homo sapiens chromosome 5 clone CTB-100... 40 0.006 9
AL844505|AL844505.1 Plasmodium falciparum chromosome 6. 40 0.007 7
AL513330|AL513330.9 Human DNA sequence *** SEQUENCING CANCE... 34 0.008 10
AL929354|AL929354.1 Plasmodium falciparum strain 3D7, chrom... 36 0.008 8
AE014843|AE014843.1 Plasmodium falciparum 3D7 chromosome 11... 38 0.009 8
AC111077|AC111077.5 Homo sapiens chromosome 18 clone RP11-1... 36 0.011 8
AL445583|AL445583.9 Human DNA sequence *** SEQUENCING CANCE... 44 0.013 10
BX134750|BX134750.1 Danio rerio genomic clone DKEY-83D14, g... 38 0.014 3
AE014819|AE014819.1 Plasmodium falciparum 3D7 chromosome 14... 36 0.014 8
AE014847|AE014847.1 Plasmodium falciparum 3D7 chromosome 12... 34 0.015 8
AL031746|AL031746.9 Plasmodium falciparum DNA from MAL1P3. 32 0.017 9
AL614751|AL614751.1 T7 end of clone 010BH05 of library SmBA... 52 0.017 1
BH177792|BH177792.1 010_O_10-21 SmBAC1 Schistosoma mansoni ... 52 0.017 1
AC011499|AC011499.5 Homo sapiens chromosome 19 clone CTB-54... 46 0.017 3
AC021123|AC021123.4 Homo sapiens chromosome 3 clone RP11-35... 36 0.017 10
AC139803|AC139803.2 Homo sapiens chromosome 5 clone RP11-13... 38 0.018 9
AC021203|AC021203.5 Homo sapiens chromosome 4 clone RP11-14... 34 0.018 10
AC139283|AC139283.1 Homo sapiens chromosome 5 clone RP11-84... 38 0.019 9
AC010272|AC010272.5 Homo sapiens chromosome 5 clone CTC-492... 36 0.019 7
AE014834|AE014834.1 Plasmodium falciparum 3D7 chromosome 10... 36 0.021 6
AL049185|AL049185.4 Plasmodium falciparum DNA *** SEQUENCIN... 34 0.022 10
AC005507|AC005507.8 Plasmodium falciparum chromosome 12 clo... 36 0.023 8
AX346690|AX346690.1 Sequence 1761 from Patent WO0200928. 38 0.023 4
BX142249|BX142249.1 Danio rerio genomic clone DKEY-105A6, g... 44 0.024 2
AX344569|AX344569.1 Sequence 20 from Patent WO0200932. 42 0.030 7
AL392087|AL392087.7 Human DNA sequence from clone RP11-454H... 38 0.032 8
AC115680|AC115680.2 Dictyostelium discoideum chromosome 2 m... 36 0.032 8
AC004709|AC004709.3 Plasmodium falciparum chromosome 12, **... 34 0.033 8
AL355355|AL355355.25 Human DNA sequence from clone RP11-730... 42 0.033 8
BX530065|BX530065.2 Zebrafish DNA sequence *** SEQUENCING I... 40 0.034 4
BX571812|BX571812.2 Zebrafish DNA sequence *** SEQUENCING I... 40 0.034 8
AL844509|AL844509.1 Plasmodium falciparum chromosome 13. 50 0.036 6
BX510348|BX510348.3 Zebrafish DNA sequence *** SEQUENCING I... 42 0.041 6
AL159173|AL159173.10 Human DNA sequence *** SEQUENCING CANC... 38 0.042 8
AC021466|AC021466.2 Homo sapiens clone RP11-351F22, WORKING... 36 0.042 9
AL732295|AL732295.22 Mouse DNA sequence from clone RP23-77F... 38 0.044 5
BX247868|BX247868.5 Zebrafish DNA sequence *** SEQUENCING I... 42 0.045 10
AC119897|AC119897.3 Mus musculus clone RP24-227F14, WORKING... 42 0.046 4
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 m... 38 0.047 8
AC010778|AC010778.3 Homo sapiens clone RP11-2N15, WORKING D... 40 0.047 7
AC023666|AC023666.3 Homo sapiens chromosome 2 clone RP11-81... 34 0.048 9
AB025602|AB025602.1 Arabidopsis thaliana genomic DNA, chrom... 38 0.049 6
AL844507|AL844507.1 Plasmodium falciparum chromosome 8. 42 0.049 6
AC140821|AC140821.1 Homo sapiens chromosome 5 clone RP11-75... 44 0.050 7
AC087341|AC087341.4 Homo sapiens chromosome 8, clone RP11-3... 40 0.051 6
AC139345|AC139345.5 Papio anubis clone rp41-256p17, WORKING... 34 0.054 6
AC136712|AC136712.9 Mus musculus, clone RP23-36H15, complet... 34 0.054 9
AE014845|AE014845.1 Plasmodium falciparum 3D7 chromosome 12... 36 0.058 8
BX640469|BX640469.1 Zebrafish DNA sequence *** SEQUENCING I... 36 0.058 9
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 m... 38 0.058 11
AE014844|AE014844.1 Plasmodium falciparum 3D7 chromosome 12... 36 0.059 7
AC123703|AC123703.3 Mus musculus clone RP23-345N18, WORKING... 36 0.059 7
AE014833|AE014833.1 Plasmodium falciparum 3D7 chromosome 10... 34 0.060 7
AC091134|AC091134.7 Homo sapiens chromosome 17, clone RP11-... 36 0.060 7
AC109825|AC109825.4 Homo sapiens BAC clone RP11-745M4 from ... 36 0.061 7
AC006281|AC006281.8 Plasmodium falciparum chromosome 12 clo... 34 0.061 7
AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 m... 36 0.065 10
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 m... 36 0.068 8
AL356313|AL356313.15 Human DNA sequence from clone RP11-531... 38 0.068 6
AE001424|AE001424.1 Plasmodium falciparum 3D7 chromosome 2 ... 38 0.070 6
AC006280|AC006280.8 Plasmodium falciparum chromosome 12 clo... 36 0.073 9
AL929353|AL929353.1 Plasmodium falciparum strain 3D7, chrom... 36 0.073 8
AF053514|AF053514.1 Homo sapiens allele 8 fragile site locu... 38 0.074 2
AC069241|AC069241.8 Homo sapiens chromosome 3 clone RP11-27... 40 0.074 7
AC144585|AC144585.1 Homo sapiens chromosome 5 clone RP11-11... 36 0.076 6
AF053511|AF053511.1 Homo sapiens allele 7 fragile site locu... 38 0.077 2
AC005139|AC005139.3 Plasmodium falciparum chromosome 12, **... 34 0.078 9
AL929357|AL929357.1 Plasmodium falciparum strain 3D7, chrom... 40 0.079 7
AC055119|AC055119.3 Homo sapiens chromosome 12 clone RP11-2... 36 0.081 10
AC008164|AC008164.3 Homo sapiens BAC clone RP11-65N17 from ... 38 0.084 6
AF053517|AF053517.1 Homo sapiens allele 11 fragile site loc... 38 0.085 2
AC018743|AC018743.27 Homo sapiens chromosome 12 clone RP11-... 36 0.086 10
AF007261|AF007261.1 Reclinomonas americana mitochondrial DN... 36 0.087 8
AL035477|AL035477.6 Plasmodium falciparum MAL4P4. 38 0.088 8
AJ011856|AJ011856.1 Saccharomyces cerevisiae complete mitoc... 38 0.093 8
AC025513|AC025513.2 Homo sapiens chromosome 21 clone RP11-6... 40 0.097 8
AL591370|AL591370.10 Zebrafish DNA sequence from clone BUSM... 34 0.10 9
AC092632|AC092632.2 Homo sapiens BAC clone RP11-337B18 from... 34 0.11 8
AL031745|AL031745.8 Plasmodium falciparum DNA from MAL1P2. 40 0.11 7
BX255917|BX255917.3 Zebrafish DNA sequence from clone DKEY-... 34 0.11 11
BX470221|BX470221.8 Zebrafish DNA sequence from clone CH211... 40 0.11 5
L06178|L06178.1 Apis mellifera ligustica complete mitochond... 34 0.11 6
>AX344565|AX344565.1 Sequence 16 from Patent WO0200932.
Length = 349980
Score = 26.3 bits (13), Expect(8) = 0.23
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 108 tttatatataaat 120
|||||||||||||
Sbjct: 1760 tttatatataaat 1772
Score = 30.2 bits (15), Expect(8) = 0.23
Identities = 18/19 (94%)
Strand = Plus / Plus
Query: 201 attaaattattttatagtt 219
||||||||||| |||||||
Sbjct: 11618 attaaattattatatagtt 11636
Score = 28.2 bits (14), Expect(8) = 0.23
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 410 tatattatatatta 423
||||||||||||||
Sbjct: 27412 tatattatatatta 27425
Score = 26.3 bits (13), Expect(8) = 0.23
Identities = 16/17 (94%)
Strand = Plus / Plus
Query: 829 ttggtattagattttta 845
||||| |||||||||||
Sbjct: 30468 ttggttttagattttta 30484
Score = 30.2 bits (15), Expect(8) = 0.23
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 858 tttgaatttggatat 872
|||||||||||||||
Sbjct: 30950 tttgaatttggatat 30964
Score = 34.2 bits (17), Expect(8) = 0.23
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 912 ttattaatgttaagtaa 928
|||||||||||||||||
Sbjct: 109305 ttattaatgttaagtaa 109321
Score = 32.2 bits (16), Expect(8) = 0.23
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1148 ttttattttaggttta 1163
||||||||||||||||
Sbjct: 139791 ttttattttaggttta 139806
Score = 38.2 bits (19), Expect(8) = 0.23
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1229 tttaaaaataaataaataa 1247
|||||||||||||||||||
Sbjct: 163767 tttaaaaataaataaataa 163785
Score = 30.2 bits (15), Expect(9) = 3e-06
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 109 ttatatataaataaa 123
|||||||||||||||
Sbjct: 21475 ttatatataaataaa 21489
Score = 28.2 bits (14), Expect(9) = 3e-06
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 206 attattttatagtt 219
||||||||||||||
Sbjct: 71898 attattttatagtt 71911
Score = 28.2 bits (14), Expect(9) = 3e-06
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 321 tattttaaatgttt 334
||||||||||||||
Sbjct: 81571 tattttaaatgttt 81584
Score = 36.2 bits (18), Expect(9) = 3e-06
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 409 ttatattatatattatat 426
||||||||||||||||||
Sbjct: 133406 ttatattatatattatat 133423
Score = 30.2 bits (15), Expect(9) = 3e-06
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 779 tggtttaatattttt 793
|||||||||||||||
Sbjct: 139698 tggtttaatattttt 139712
Score = 34.2 bits (17), Expect(9) = 3e-06
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 830 tggtattagatttttat 846
|||||||||||||||||
Sbjct: 195616 tggtattagatttttat 195632
Score = 32.2 bits (16), Expect(9) = 3e-06
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1109 tattgtattttattat 1124
||||||||||||||||
Sbjct: 245120 tattgtattttattat 245135
Score = 34.2 bits (17), Expect(9) = 3e-06
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 1148 ttttattttaggtttag 1164
|||||||||||||||||
Sbjct: 249716 ttttattttaggtttag 249732
Score = 38.2 bits (19), Expect(9) = 3e-06
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1229 tttaaaaataaataaataa 1247
|||||||||||||||||||
Sbjct: 276202 tttaaaaataaataaataa 276220
Score = 32.2 bits (16), Expect(7) = 2.2
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 1232 aaaaataaataaataa 1247
||||||||||||||||
Sbjct: 7984 aaaaataaataaataa 7969
Score = 28.2 bits (14), Expect(7) = 2.2
Identities = 17/18 (94%)
Strand = Plus / Minus
Query: 404 aaatgttatattatatat 421
|||| |||||||||||||
Sbjct: 10716 aaattttatattatatat 10699
Score = 30.2 bits (15), Expect(7) = 2.2
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 362 aaatttcaccatatt 376
|||||||||||||||
Sbjct: 22242 aaatttcaccatatt 22228
Score = 28.2 bits (14), Expect(7) = 2.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 249 aaaaattacaacaa 262
||||||||||||||
Sbjct: 44000 aaaaattacaacaa 43987
Score = 30.2 bits (15), Expect(7) = 2.2
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 201 attaaattattttat 215
|||||||||||||||
Sbjct: 103007 attaaattattttat 102993
Score = 28.2 bits (14), Expect(7) = 2.2
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 116 taaataaaacaaaa 129
||||||||||||||
Sbjct: 158363 taaataaaacaaaa 158350
Score = 38.2 bits (19), Expect(7) = 2.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 101 attcttatttatatataaa 119
|||||||||||||||||||
Sbjct: 238780 attcttatttatatataaa 238762
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 42215243
Number of Sequences: 25022185
Number of extensions: 42215243
Number of successful extensions: 5302353
Number of sequences better than 10.0: 1806
length of query: 1248
length of database: P,692,356,608
effective HSP length: 23
effective length of query: 1225
effective length of database: P,116,846,353
effective search space: 39343136782425
effective search space used: 39343136782425
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 200 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home