Dictyostelium discoideum cDNA Clone VFF415

Sequence VFF415

AATATAAAAA TGATTTCATT AGAAGATCTA TCACCAACAT TATGGAAATC
ACCAGATAAA GAGGGTGAAT TAAAGAAACA AGGACATGTA GTAAAGAATT
GGAAGAAAAG AAAGTTTATT ATTCAAAATG ATATGTTATT TTATTTTAAG
GATAAAGAGG AGAGACCAGT TGGAGCGGTG CCATTAAGAA TGTCACGTTG
CTATGAAAAT AAATCATTAG GTAAACCAAA TTGTTTCGAA TTAGTATCAC
CAAGAATCAA TAAAACATTT TTCATTCAAG CCAATACACC AGATGAAATG
GCAAGTTGGA TGAAAGCAGT TGAGAAAGGA TCAGAATATA GCACAGTATC
ACAACCATTC AATCTTAAAC ATGAGGTACA TGTTGATTTC AATTCAGCAA
CTGGTTTCTC TGGTTTACCA AAAGAATGGG AAGTTATCTT AAAGTCTTCA
AATGTTTCAA AACAAGAAGT ACTCGATAAA CCAAGTGAAC GGTTATCAGT
TTTAGAATTT CAAGCTGGTA GAACAATGGA AAAATCAAAT TCTCAAAATT
TATCTGCACT TCCTGATGAA TCAAATTTAA CTCTTAGTGA TTTAGTAACA
AA-------- --TAATGCCA AACTCTTGGT AACAGAGATT GCAATTATGA
AGACATCACA TCATGATAAC ATTGTAAATT ACATTGATAG TTATATAGTG
AACGATAGAG AACTTTGGGT TGCAATGGAG TTTATGGGTG GTGGTTGTTT
AACAGACATT TTAGAGGCAT TTGATAATAT CAAAATGAGT GAGATTCAAA
TTGCTTATGT GGTTAAAGAG ACCTTGAAGG CATTGCAATA CATTCATAGT
CTTCATCGTA TTCATAGAGA TATAAAGAGT GATAATATTT TATTGGGCTC
AGAGGGTAGT GTAAAGATTG CTGATTTTGG TTATGCCGCT CAATTAACTC
AAAAACAACA AAAACGTAAT ACCGTCGTTG GTACCCCTTA TTGGATGGCC
CCAGAACTCA TTAGAGGTCA CGATTATGGT GTCAAGGTTG ATATTTGGTC
TTTGGGTATC ATGATGATGG AAATGGCTGA AGGTGAACCA CCTTATATGG
ATTTCCCACC ATTGCGTGCT CTTTTCCTCA TCACTACTAA AGGTATTCCA
CCACTTAAAG AAACAACCAA ATGGAGTAAA ACTTTCCAAG ATTTCTTCTC
AAAATGTCTC GATATCAATG TTGCTAATCG TCCTGATGCT ACCGATCTTT
TAAAACATCC TTTCATGGAT TTGGCATGTG ATTCCTCTGA ATTTAAACCA
TAATTCAAGC CACAAGAAA

Translated Amino Acid Sequence VFF415

NIKMISLEDLSPTLWKSPDKEGELKKQGHVVKNWKKRKFIIQNDMLFYFKDKEERPVGAV
PLRMSRCYENKSLGKPNCFELVSPRINKTFFIQANTPDEMASWMKAVEKGSEYSTVSQPF
NLKHEVHVDFNSATGFSGLPKEWEVILKSSNVSKQEVLDKPSERLSVLEFQAGRTMEKSN
SQNLSALPDESNLTLSDLVT---

---NAKLLVTEIAIMKTSHHDNIVNYIDSYIVNDRELWVAMEFMGGGCLTDILEAFDNIK
MSEIQIAYVVKETLKALQYIHSLHRIHRDIKSDNILLGSEGSVKIADFGYAAQLTQKQQK
RNTVVGTPYWMAPELIRGHDYGVKVDIWSLGIMMMEMAEGEPPYMDFPPLRALFLITTKG
IPPLKETTKWSKTFQDFFSKCLDINVANRPDATDLLKHPFMDLACDSSEFKP*fkpqe

Homology VFF415 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFF415 (VFF415Q) /CSM/VF/VFF4-A/VFF415Q.Seq.d/                       2555   0.0
VFG871 (VFG871Q) /CSM/VF/VFG8-C/VFG871Q.Seq.d/                       1374   0.0
VFE896 (VFE896Q) /CSM/VF/VFE8-D/VFE896Q.Seq.d/                       1374   0.0
AFE641 (AFE641Q) /CSM/AF/AFE6-B/AFE641Q.Seq.d/                       1366   0.0
AFK585 (AFK585Q) /CSM/AF/AFK5-D/AFK585Q.Seq.d/                       1362   0.0
AFB708 (AFB708Q) /CSM/AF/AFB7-A/AFB708Q.Seq.d/                       1332   0.0
SFD370 (SFD370Q) /CSM/SF/SFD3-C/SFD370Q.Seq.d/                       1324   0.0
CFH857 (CFH857Q) /CSM/CF/CFH8-C/CFH857Q.Seq.d/                       1312   0.0
CFA281 (CFA281Q) /CSM/CF/CFA2-D/CFA281Q.Seq.d/                       1306   0.0
SFH221 (SFH221Q) /CSM/SF/SFH2-A/SFH221Q.Seq.d/                       1304   0.0

Homology VFF415 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


AF277804|AF277804.1 Dictyostelium discoideum p21-activated ...  1074  0.0  6
U67716|U67716.1 Dictyostelium discoideum myosin I heavy cha...    94  1e-49  6
Y10158|Y10158.1 D.discoideum mRNA for STE20/pak kinase homo...    94  2e-49  6
AC115606|AC115606.2 Dictyostelium discoideum chromosome 2 m...    94  2e-43  6
AF131221|AF131221.1 Dictyostelium discoideum p21-activated ...    66  2e-28  5
U51923|U51923.3 Dictyostelium discoideum STE20-telated kina...    60  1e-26  5
AZ677365|AZ677365.1 ENTFX50TR Entamoeba histolytica Sheared...    48  6e-11  5
AZ684578|AZ684578.1 ENTJV90TF Entamoeba histolytica Sheared...    48  6e-11  5
BH161927|BH161927.1 ENTQY64TF Entamoeba histolytica Sheared...    42  4e-08  5
AZ676464|AZ676464.1 ENTKP26TR Entamoeba histolytica Sheared...    42  4e-08  5

Homology VFF415 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q55GV3) RecName: Full=Serine/threonine-protein kinase pakC;    ...   469   e-130
AF277804_1(AF277804|pid:none) Dictyostelium discoideum PakC mRNA...   469   e-130
Y10158_1(Y10158|pid:none) D.discoideum mRNA for STE20/pak kinase...   340   1e-91
(Q869N2) RecName: Full=Serine/threonine-protein kinase pakB;    ...   340   1e-91
U67716_1(U67716|pid:none) Dictyostelium discoideum myosin I heav...   340   1e-91
AY870660_1(AY870660|pid:none) Entamoeba histolytica p21-activate...   321   7e-86
AF131221_1(AF131221|pid:none) Dictyostelium discoideum p21-activ...   311   4e-83
AY710430_19(AY710430|pid:none) Cryptococcus gattii strain WM276 ...   256   2e-66
CP000294_70(CP000294|pid:none) Cryptococcus gattii WM276 chromos...   256   2e-66
AF542530_25(AF542530|pid:none) Cryptococcus neoformans var. neof...   254   8e-66

Homology VFF415 vs Genome