Homology VFE807 vs DNA
Query= VFE807 (VFE807Q) /CSM/VF/VFE8-A/VFE807Q.Seq.d/
(724 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
new_ddbjhum.seq; ddbjpri.seq; new_ddbjpri.seq; ddbjrod1.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
new_ddbjrod.seq; ddbjmam.seq; new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; new_ddbjvrt.seq; ddbjinv1.seq; ddbjinv2.seq;
ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; new_ddbjinv.seq;
ddbjpln1.seq; ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq;
ddbjpln6.seq; new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq; ddbjvrl3.seq;
new_ddbjvrl.seq; ddbjphg.seq; new_ddbjphg.seq; ddbjuna.seq;
new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq; ddbjgss11.seq;
ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq; ddbjgss15.seq;
ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq; ddbjgss19.seq;
ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq; ddbjgss22.seq;
ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq; ddbjgss26.seq;
ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq; ddbjgss3.seq;
ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq; ddbjgss33.seq;
ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq; ddbjgss37.seq;
ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq; ddbjgss40.seq;
ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq; ddbjgss44.seq;
ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq; ddbjgss48.seq;
ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq; ddbjgss51.seq;
ddbjgss52.seq; ddbjgss53.seq; ddbjgss6.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; new_ddbjgss1.seq; new_ddbjgss2.seq;
new_ddbjgss3.seq; new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; new_ddbjhtg1.seq; new_ddbjhtg2.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; new_ddbjpat.seq; ddbjsts1.seq;
ddbjsts2.seq; new_ddbjsts.seq; ddbjsyn.seq; new_ddbjsyn.seq;
est_atha1.seq; new_est_atha1.seq; est_cele1.seq; new_est_cele1.seq;
est_drer1.seq; new_est_drer1.seq; est_dmel1.seq; new_est_dmel1.seq;
est_gmax1.seq; new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; new_est_hum1.seq; est_lesc1.seq;
new_est_lesc1.seq; est_mous1.seq; est_mous2.seq; est_mous3.seq;
new_est_mous1.seq; est_osat1.seq; new_est_osat1.seq; est_rnor1.seq;
new_est_rnor1.seq; est_xlae1.seq; new_est_xlae1.seq; est_zmay1.seq;
new_est_zmay1.seq; est_rest1.seq; est_rest2.seq; new_est_rest1.seq
25,022,185 sequences; P,692,356,608 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AL390059|AL390059.9 Human DNA sequence from clone RP11-399E... 48 0.15 1
Z49154|Z49154.1 Human DNA sequence from clone LA04NC01-1C2 ... 48 0.15 1
AZ977351|AZ977351.1 2M0253B17F Mouse 10kb plasmid UUGC2M li... 48 0.15 1
AC005516|AC005516.1 Homo sapiens Chromosome 4p16.3 BAC clon... 48 2.0 2
AF069300|AF069300.1 Arabidopsis thaliana BAC F3D13. 44 2.4 1
AC093511|AC093511.4 Homo sapiens chromosome 16 clone CTD-25... 44 2.4 1
AC113999|AC113999.3 Mus musculus chromosome 16 clone RP23-1... 40 2.9 4
AL049184|AL049184.5 Plasmodium falciparum DNA *** SEQUENCIN... 40 3.8 3
AL772302|AL772302.19 Mouse DNA sequence from clone RP23-450... 48 6.1 3
AC098045|AC098045.5 Rattus norvegicus clone CH230-106P12, W... 42 7.3 2
AC123490|AC123490.3 Rattus norvegicus clone CH230-96H4, ***... 42 9.4 1
AC140342|AC140342.1 Mus musculus chromosome UNK clone RP24-... 42 9.4 1
AC115908|AC115908.4 Mus musculus clone RP24-477L8, WORKING ... 42 9.4 1
AP002060|AP002060.1 Arabidopsis thaliana genomic DNA, chrom... 42 9.4 1
AX573242|AX573242.1 Sequence 88 from Patent WO02074992. 42 9.4 1
AC079007|AC079007.2 Homo sapiens chromosome 8 clone RP11-15... 42 9.4 1
BQ869414|BQ869414.1 QGD6B15.yg.ab1 QG_ABCDI lettuce salinas... 42 9.4 1
AC096605|AC096605.6 Rattus norvegicus clone CH230-86O22, WO... 42 9.4 1
AC079489|AC079489.2 Mus musculus chromosome 16 clone RP23-1... 42 9.4 1
AC114248|AC114248.4 Rattus norvegicus clone CH230-342H14, *... 42 9.4 1
AC093986|AC093986.6 Rattus norvegicus clone CH230-58L13, WO... 42 9.4 1
BX548248|BX548248.2 Zebrafish DNA sequence *** SEQUENCING I... 42 9.4 1
BX470210|BX470210.3 Zebrafish DNA sequence *** SEQUENCING I... 42 9.4 1
AC016614|AC016614.6 Homo sapiens chromosome 5 clone CTD-221... 42 9.4 1
AQ966939|AQ966939.1 LERIN18TF LERG Arabidopsis thaliana gen... 42 9.4 1
BB639993|BB639993.1 Mus musculus 7 days neonate cerebellum ... 42 9.4 1
AX573241|AX573241.1 Sequence 87 from Patent WO02074992. 42 9.4 1
AC119385|AC119385.5 Rattus norvegicus clone CH230-249J3, **... 42 9.4 1
AC117582|AC117582.4 Mus musculus clone RP23-131O16, WORKING... 42 9.4 1
BQ870046|BQ870046.1 QGD7P07.yg.ab1 QG_ABCDI lettuce salinas... 42 9.4 1
AY245865|AY245865.1 Homo sapiens chromosome 5 clone RP11-37... 42 9.4 1
BZ575024|BZ575024.1 msh2_4265.y2 msh Pseudomonas aeruginosa... 42 9.4 1
AC009158|AC009158.7 Homo sapiens chromosome 16 clone RP11-6... 44 21 2
AL935054|AL935054.11 Mouse DNA sequence from clone RP23-280... 42 25 2
AC008791|AC008791.5 Homo sapiens chromosome 5 clone CITB-H1... 42 60 2
AL161492|AL161492.2 Arabidopsis thaliana DNA chromosome 4, ... 44 75 4
>AL390059|AL390059.9 Human DNA sequence from clone RP11-399E10 on
chromosome 4.
Length = 184590
Score = 48.1 bits (24), Expect = 0.15
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 274 taaactccaagagacatcagacaatacc 301
|||| |||||||||||||||||||||||
Sbjct: 94526 taaattccaagagacatcagacaatacc 94553
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 11790680
Number of Sequences: 25022185
Number of extensions: 11790680
Number of successful extensions: 915989
Number of sequences better than 10.0: 55
length of query: 724
length of database: P,692,356,608
effective HSP length: 23
effective length of query: 701
effective length of database: P,116,846,353
effective search space: 22513909293453
effective search space used: 22513909293453
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 200 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home