Dictyostelium discoideum cDNA Clone VFE696

Sequence VFE696

ATTATAAACT ATATAAGATT TGTGTGTTTG TTTTTTTTTT ACTTAATCAA
TAAAAAATTA AAACAAATCA ATTATAGNGT AAACCCTTGT AAAAATTAAA
TAAAAAACAT TGTATTATAT TCCACCTCAT ATTTTTTTTT TCCNTNTTAA
AATCACCTTT TTTNTNTNTA ATNTTTTAAA AAAAANTAAA AAAATTATTT
AAAANNGTC- ---------G GCATCCAAAC AATTTATTAT TGGCAACCTC
ATCCTCTGAC TACAAGGTTA GAGTATTCGA CGCCTACATA AAGAAAGCCG
ATGGTCGTAG TGTCACTCGT CCATACGGTG AAGTCGCTTT TGGTGAACCA
GTCTTTGAAT TTGACCAATG CGCCTCATGG GTCCATGCCC TCAAATGGTC
CCCATCCGGT AGTACCTTGG CTTACTCCTC ACACGATGGT GTCTTTGCCG
TTGCAAACTT TTCAACCAAT CCACCAACCA TCGAAAAACT CAGAGTTCGT
AATTTACCAT TACGTGATCT CCTTTACATC ACTGAAAACT CTATCGCCGG
TGTTGGTTAC GATTGTGCTC CACTTTTAAT CACTAATCAA AACGGTTGGA
AATATTCTGG TGAAATGGAT AAGGCCTCTG AAGGTGGTGC TGCCGCTGGC
TCTGAAACCT CTGCTCGTAA ACTCTTCCAA AATAAAGTAG ACCTTGGTGA
ATCAAAATCT GCCGATAAAA AGTTAACAAC CGTTCATCAA AATTGTATTA
CTTCAATCGT TCCATTCAAG AGTGTAGGTG GTGTCGTCTC TGATTTCAGT
ACCTCTGGTT TAGATGGTAA CATTGTCGTA TGGCATGTAA AAGCTCTTGA
AGCTAAAAAT AAATTCAAAG TCATTTAAAT AGNATAAAAA AATAAAAATT
TTAAATT

Translated Amino Acid Sequence VFE696

yklykicvfvffllnq*kiktnql*xkpl*klnkkhciifhlifffsxlkspfxxxxf*K
KXKKLFKXV---

---HPNNLLLATSSSDYKVRVFDAYIKKADGRSVTRPYGEVAFGEPVFEFDQCASWVHAL
KWSPSGSTLAYSSHDGVFAVANFSTNPPTIEKLRVRNLPLRDLLYITENSIAGVGYDCAP
LLITNQNGWKYSGEMDKASEGGAAAGSETSARKLFQNKVDLGESKSADKKLTTVHQNCIT
SIVPFKSVGGVVSDFSTSGLDGNIVVWHVKALEAKNKFKVI*ix*knknfk

Homology VFE696 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFI561 (VFI561Q) /CSM/VF/VFI5-C/VFI561Q.Seq.d/                       1314   0.0
VFE696 (VFE696Q) /CSM/VF/VFE6-D/VFE696Q.Seq.d/                       1314   0.0
SFI444 (SFI444Q) /CSM/SF/SFI4-B/SFI444Q.Seq.d/                       1314   0.0
AFD360 (AFD360Q) /CSM/AF/AFD3-C/AFD360Q.Seq.d/                       1314   0.0
FC-AL11 (FC-AL11Q) /CSM/FC/FC-AL/FC-AL11Q.Seq.d/                     1310   0.0
FC-208 (FC-208Q) /CSM/CG/CG-FC/FC-208Q.Seq.d/                        1310   0.0
AFJ120 (AFJ120Q) /CSM/AF/AFJ1-A/AFJ120Q.Seq.d/                       1267   0.0
VFH613 (VFH613Q) /CSM/VF/VFH6-A/VFH613Q.Seq.d/                       1263   0.0
AFM674 (AFM674Q) /CSM/AF/AFM6-D/AFM674Q.Seq.d/                       1263   0.0
AFB557 (AFB557Q) /CSM/AF/AFB5-C/AFB557Q.Seq.d/                       1247   0.0

Homology VFE696 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


AF095930|AF095930.1 Dictyostelium discoideum p41-Arc (arpD)...  1310  0.0  3
AC094767|AC094767.3 Rattus norvegicus clone CH230-5L7, *** ...    50  0.49  2
AC124472|AC124472.3 Mus musculus chromosome UNK clone RP24-...    46  0.76  1
AJ278435|AJ278435.1 Mus musculus Ranbp7 gene, Staf gene and...    46  0.76  1
AC124921|AC124921.3 Rattus norvegicus clone CH230-214L24, *...    50  1.0  2
AC103107|AC103107.5 Rattus norvegicus clone CH230-30A4, WOR...    44  3.0  1
AP004474|AP004474.1 Lotus corniculatus var. japonicus genom...    38  5.9  4
AC138307|AC138307.1 Mus musculus chromosome UNK clone RP24-...    36  9.4  3
AQ988765|AQ988765.1 RPCI-23-327I18.TV RPCI-23 Mus musculus ...    42     12  1
AC094687|AC094687.5 Rattus norvegicus clone CH230-5E14, ***...    42     12  1

Homology VFE696 vs Protein

Sequences producing significant alignments:                      (bits) Value


EU961854_1(EU961854|pid:none) Zea mays clone 238674 actin-relate...   140   1e-31
AK073919_1(AK073919|pid:none) Oryza sativa Japonica Group cDNA c...   138   3e-31
AJ720885_1(AJ720885|pid:none) Gallus gallus mRNA for hypothetica...   134   6e-30
EF678447_1(EF678447|pid:none) Picea sitchensis clone WS02921_O12...   131   4e-29
BC073411_1(BC073411|pid:none) Xenopus laevis MGC80877 protein, m...   131   5e-29
EF011872_1(EF011872|pid:none) Xenopus laevis actin-related prote...   129   2e-28
BC076887_1(BC076887|pid:none) Xenopus tropicalis actin related p...   128   3e-28
BC071519_1(BC071519|pid:none) Danio rerio zgc:86896, mRNA (cDNA ...   128   4e-28
A84719(A84719) probable ARP2/3 protein complex subunit p41 [impo...   128   4e-28
BC155744_1(BC155744|pid:none) Danio rerio zgc:86896, mRNA (cDNA ...   128   4e-28

Homology VFE696 vs Genome