Dictyostelium discoideum cDNA Clone VFE671

Sequence VFE671

AATNATCATA TTTATAATTA TATCTTTTTT GTTTAATAAA AAAGAAAGAA
TACCAACATG AGACTTTTAT TGTGTTTAAT TTTCTTAGTT TTTGTTTTCA
ATTTTGCATT ATCAACAGTT CATTTCAAAG ATACCTTTGA TAACGATTGG
GAATCAAGAT GGGTTGTTAG TGATTGGCAT AAAGAAGATG GTAAATCAGG
TAAATTAGTT CATACTGCAG GTAAATGGTT TGGTGATGAA AATCAAAAAG
GTATTCAAAC TAGTGAAGAT GCTCGTTTCT ACGCTGTATC AGCTAAATTC
CCAAGTTTCA GTAACAAAGG TAAAGATTTA GTTCTCCAAT ACACTGTAAA
GAATGAACAA AAAGTTGATT GTGGTGGTTC ATACATCAAG TTATTACCAT
CCAAATTAGA TCAATCAGCA TTCGATGGTG AATCTGAATA TTCCATTATG
TTTGGTCCAG ATGTTTGTGG TGCCTCAAAG AGAGTTCACG TCATTCTCAA
CTACAAAGGA AAGAACCATT TAATCAAGAA AGAAATCAAC AAAGTTGAAA
CCGATCAATT AACTCATCAA TACACTTTGG TCATTTCACC AGATAACACC
TACAAAGTAC TCGTCGATAA CAA------- ---TGACGTA AAGGAAATCG
ATGACCCAGA AGATGTTAAA CCAGCCGGTC ATGACGATAT CCCAGCTTCA
ATCGTTGATC CAGAAGCTGT CAAACCAGAG GATTGGAATG AAGAAGACGA
CGGTGAATGG GAAGCCCCAA CCATCGCCAA TCCAGAATAC AAAGGTGAAT
GGAAAGCAAA GAAAATCCCA AATCCAGAAT ACAAAGGTGA ATGGGTACAC
CCATTAATTG ATAACCCAGA ATACGCTGAA GACAATGAAC TCTACCTCTT
TAATGATCTC GGTGCTATCG GTTTCGAATT ATGGCAAGTT AAATCTGGTT
CCATCTTTAA CAATATGATC GTCACCGACT CTGTCGAAGA AGCTAAAGAT
TTCTCTGAAA AGACCTTTGT TGCCAACCAA GAAGCCGAAA AGAAAATGTT
TGACGACCTC GAAGCCGCCA AAGCTGAAGA GAGAAAGAAA GCTGACGAAA
AATTAGCTGC CGAAAAAGCT GCTGAAAAAG AAGCCGAAGA AGCTGATGAA
GAAGAAGAAG AAGTCGCTGA AGAAGATTTA GTTAAAACTG ATGACAAAAA
AGAAGAAGTC AAAAAATCAA CCAAAAAAGT NATCAGACGA ACTTTAAANA
AATAAATA

Translated Amino Acid Sequence VFE671

nxhiynyiffv**KRKNTNMRLLLCLIFLVFVFNFALSTVHFKDTFDNDWESRWVVSDWH
KEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLVLQYTVKNEQ
KVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNYKGKNHLIKKEIN
KVETDQLTHQYTLVISPDNTYKVLVDN---

---DVKEIDDPEDVKPAGHDDIPASIVDPEAVKPEDWNEEDDGEWEAPTIANPEYKGEWK
AKKIPNPEYKGEWVHPLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTDSV
EEAKDFSEKTFVANQEAEKKMFDDLEAAKAEERKKADEKLAAEKAAEKEAEEADEEEEEV
AEEDLVKTDDKKEEVKKSTKKVIRRTLXK*i

Homology VFE671 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFE671 (VFE671Q) /CSM/VF/VFE6-C/VFE671Q.Seq.d/                       1953   0.0
VFM435 (VFM435Q) /CSM/VF/VFM4-B/VFM435Q.Seq.d/                       1027   0.0
VFM276 (VFM276Q) /CSM/VF/VFM2-D/VFM276Q.Seq.d/                       1027   0.0
VFH144 (VFH144Q) /CSM/VF/VFH1-B/VFH144Q.Seq.d/                       1027   0.0
VFH121 (VFH121Q) /CSM/VF/VFH1-A/VFH121Q.Seq.d/                       1027   0.0
VFD485 (VFD485Q) /CSM/VF/VFD4-D/VFD485Q.Seq.d/                       1027   0.0
VFD121 (VFD121Q) /CSM/VF/VFD1-A/VFD121Q.Seq.d/                       1027   0.0
VFA823 (VFA823Q) /CSM/VF/VFA8-A/VFA823Q.Seq.d/                       1027   0.0
VFA820 (VFA820Q) /CSM/VF/VFA8-A/VFA820Q.Seq.d/                       1027   0.0
SLE570 (SLE570Q) /CSM/SL/SLE5-C/SLE570Q.Seq.d/                       1027   0.0

Homology VFE671 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA,...  1019  0.0  5
BD248385|BD248385.1 Gene participating in tolerance against...    92  1e-23  3
BH160872|BH160872.1 ENTRI18TR Entamoeba histolytica Sheared...    80  1e-17  3
AZ543757|AZ543757.1 ENTGD24TR Entamoeba histolytica Sheared...    80  8e-11  1
BI921109|BI921109.1 EST541012 tomato callus Lycopersicon es...    74  8e-11  2
AW649196|AW649196.1 EST327650 tomato germinating seedlings,...    74  5e-09  1
AW626316|AW626316.1 EST320223 tomato radicle, 5 d post-imbi...    74  5e-09  1
BE459798|BE459798.1 EST415090 tomato developing/immature gr...    74  5e-09  1
AI771812|AI771812.1 EST252912 tomato ovary, TAMU Lycopersic...    74  5e-09  1
BE435540|BE435540.1 EST406618 tomato breaker fruit, TIGR Ly...    74  5e-09  1

Homology VFE671 vs Protein

Sequences producing significant alignments:                      (bits) Value


U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   357   e-169
AC133339_28(AC133339|pid:none) Oryza sativa chromosome 3 BAC OSJ...   226   2e-98
CP002684_6164(CP002684|pid:none) Arabidopsis thaliana chromosome...   226   5e-98
AK318734_1(AK318734|pid:none) Arabidopsis thaliana AT1G56340 mRN...   226   5e-98
HC747470_1(HC747470|pid:none) Sequence 4561 from Patent WO201004...   223   1e-97
(Q40401) RecName: Full=Calreticulin; Flags: Precursor;  &T16968(...   225   1e-97
AB196794_1(AB196794|pid:none) Glycine max Gm crt-1 mRNA for calr...   223   2e-97
AF283816_1(AF283816|pid:none) Pinus taeda calreticulin mRNA, com...   220   3e-97
EU984501_1(EU984501|pid:none) Nicotiana tabacum calreticulin mRN...   223   3e-97
HC747438_1(HC747438|pid:none) Sequence 4529 from Patent WO201004...   225   4e-97

Homology VFE671 vs Genome